| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316981
Identifier: 158316981
GI number: 158316981
Start: 6273998
End: 6274612
Strand: Reverse
Name: 158316981
Synonym: Franean1_5225
Alternate gene names: NA
Gene position: 6274612-6273998 (Counterclockwise)
Preceding gene: 158316982
Following gene: 158316980
Centisome position: 69.86
GC content: 70.57
Gene sequence:
>615_bases ATGAACAGCACCGTGGACGTCGAGAGCGGCCCCGAGGCCGGCACCGTCACTGAGGCCGGCACTGTCACTGAGGCCGGCAC CGTCACCGACCCGAACACAGTCAGCGAGGCGGGCAGCGCCGTCGAGGGCGGGACCGTCAGCGAGAAGGAGGACCTGCTCG CGACGCTGGCGAAGCACCGGCACTTCCTGCGCTACACCGTCCGTGACCTGACCGACGAACAGGCTGCCCGGCGCACCACC GTCAGCGCGCTGTGCCTCGGCGGGCTGATCAAGCATGTCACCGCGGTCGAGCGGTCCTGGGTCGACTTCATCCTCGGCGG AGACCAGCAGGCGGACGCCGAGAGCTGGATGAAGCAGCACCAGATGCTGATGGGCGACACCCTGACCGACCTGCTCGCCG ACTACGAGGCCACGGCCGAGCGGACCACGGAGGTTGTCGGGTCGCTGCCCGATCTCGGTGTGACCCGGCCGCTGCCCGAG GCCCCGTGGTTCGAGCCCGGGGCGCGCTGGTCGATGCGGCGCGTCCTGCTCCACCTCATCGCCGAGACGTCGCAGCACGC CGGCCACGCGGACATCATCCGCGAGAGCCTCGACGGCAGCCGCACCATGGGCTGA
Upstream 100 bases:
>100_bases GGTCGGGTTCCCGCCAAGGACAGAAGCTGTCCGCGAGGGTTCCTATCGTCGGCTCCACAGTCATCCGGCGAGCAGTCACC GGCGAGCAGAGGTGGGAACC
Downstream 100 bases:
>100_bases GCGGAGCCGAGCGGGCCGCCGCCCCCGGGCGGCGCCCGGTCACTCGGCGAGTTCCGGTAGGGGTGCCGACGCCGAGCGTC CCGGCGCCGGGGTCCGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MNSTVDVESGPEAGTVTEAGTVTEAGTVTDPNTVSEAGSAVEGGTVSEKEDLLATLAKHRHFLRYTVRDLTDEQAARRTT VSALCLGGLIKHVTAVERSWVDFILGGDQQADAESWMKQHQMLMGDTLTDLLADYEATAERTTEVVGSLPDLGVTRPLPE APWFEPGARWSMRRVLLHLIAETSQHAGHADIIRESLDGSRTMG
Sequences:
>Translated_204_residues MNSTVDVESGPEAGTVTEAGTVTEAGTVTDPNTVSEAGSAVEGGTVSEKEDLLATLAKHRHFLRYTVRDLTDEQAARRTT VSALCLGGLIKHVTAVERSWVDFILGGDQQADAESWMKQHQMLMGDTLTDLLADYEATAERTTEVVGSLPDLGVTRPLPE APWFEPGARWSMRRVLLHLIAETSQHAGHADIIRESLDGSRTMG >Mature_204_residues MNSTVDVESGPEAGTVTEAGTVTEAGTVTDPNTVSEAGSAVEGGTVSEKEDLLATLAKHRHFLRYTVRDLTDEQAARRTT VSALCLGGLIKHVTAVERSWVDFILGGDQQADAESWMKQHQMLMGDTLTDLLADYEATAERTTEVVGSLPDLGVTRPLPE APWFEPGARWSMRRVLLHLIAETSQHAGHADIIRESLDGSRTMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22028; Mature: 22028
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTVDVESGPEAGTVTEAGTVTEAGTVTDPNTVSEAGSAVEGGTVSEKEDLLATLAKHR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHH HFLRYTVRDLTDEQAARRTTVSALCLGGLIKHVTAVERSWVDFILGGDQQADAESWMKQH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QMLMGDTLTDLLADYEATAERTTEVVGSLPDLGVTRPLPEAPWFEPGARWSMRRVLLHLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AETSQHAGHADIIRESLDGSRTMG HHHHCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MNSTVDVESGPEAGTVTEAGTVTEAGTVTDPNTVSEAGSAVEGGTVSEKEDLLATLAKHR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHH HFLRYTVRDLTDEQAARRTTVSALCLGGLIKHVTAVERSWVDFILGGDQQADAESWMKQH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QMLMGDTLTDLLADYEATAERTTEVVGSLPDLGVTRPLPEAPWFEPGARWSMRRVLLHLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AETSQHAGHADIIRESLDGSRTMG HHHHCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA