| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is suhB [H]
Identifier: 158316957
GI number: 158316957
Start: 6243695
End: 6244609
Strand: Direct
Name: suhB [H]
Synonym: Franean1_5201
Alternate gene names: 158316957
Gene position: 6243695-6244609 (Clockwise)
Preceding gene: 158316953
Following gene: 158316960
Centisome position: 69.51
GC content: 76.28
Gene sequence:
>915_bases ATGAGCACCGTGGACGCGCCCCCCAGCACCCTCCGCCCGGCCCCGGCCGCCCTGCTCGACCTCGGCCTGGACGTCGCCCG CGAGGCCGGGGCCCTGCTCGTCACCGGCCGCGCCGGCACGGTCGCCGCCGAGGCGACGAAATCCTCGCCGACCGACGTCG TCACCGCGCTGGACCGGGCGTCGGAGGCCCTCGTCGCCCGCCGCCTGCGCGAAGCCCGCCCGGACGACGGCCTGCTCGGC GAGGAGGGCTCCGACACAGCGGGCACCAGCGGCGTCCGCTGGATCGTCGACCCCCTCGACGGGACGGTCAACTTCCTCTA CCGCCTGCCCAACTGGGCGGTGTCGATCGCGGCCGAGCTGGACGGCGAGATCGTGGCGGGCGTGGTGCACGCGCCCGCGA TGGGAGTCACATACACCGCTGTCCGCGGCGGCGGCGCCTTCCGCTGGGAGACACCGGTGGGCACGGATCGCGGGGGCGAC CAGGGCGCTGGCACCGGCGCGGGCGCGCCGCTCGGGCCGACGGCCGGGGAGCCGACGAAGCTGACCGGTTCGGCGGTGAC CGAGCTGGGCGGCGCACTCGTCGCCACCGGCTTCGGATACACCGAGCGCCGCCGGACGACCCAGGCCGCGGTGCTGACCC GGGTCGTGCCCAGGGTCCGCGACATCCGCCGGATGGGCGCGGCCTCCCTCGACCTCTGCGCCGCCGCGGCGGGCATCGTC GACGCCTACTACGAACGCGGACTACACCCCTGGGACCACGCGGCGGGCGCACTGATCGCCGCCGAGGCGGGCCTGCGGGT CGGCGGCCTGGACGGCCGGGAAGTCAGCGAGGACCTCGTCATAGCCGCTCCCCCCTCCCTGTTCGCCAACCTCACCGCCC TGCTGGCCGAACACCCCCGCGCCGACACCGACTAG
Upstream 100 bases:
>100_bases CCACGCGCACAATCCTACGGGGCACGCGATCGTCGCCATCGCGGCGGGAGTGCGGGCCGCGGGCCCCTCGCCGCTCCCGC CGCCGGCCAGCCTTGGCAGG
Downstream 100 bases:
>100_bases CGGCCACCACCAGCCCGGCGGTCCGGCCCCGCTTCCGGCTCCGCGATGCGGCCCTGGCCCGCCTGACCCCGGCCCAGCCG GGCCAGGGGCTGGGCTGGGC
Product: inositol-phosphate phosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSTVDAPPSTLRPAPAALLDLGLDVAREAGALLVTGRAGTVAAEATKSSPTDVVTALDRASEALVARRLREARPDDGLLG EEGSDTAGTSGVRWIVDPLDGTVNFLYRLPNWAVSIAAELDGEIVAGVVHAPAMGVTYTAVRGGGAFRWETPVGTDRGGD QGAGTGAGAPLGPTAGEPTKLTGSAVTELGGALVATGFGYTERRRTTQAAVLTRVVPRVRDIRRMGAASLDLCAAAAGIV DAYYERGLHPWDHAAGALIAAEAGLRVGGLDGREVSEDLVIAAPPSLFANLTALLAEHPRADTD
Sequences:
>Translated_304_residues MSTVDAPPSTLRPAPAALLDLGLDVAREAGALLVTGRAGTVAAEATKSSPTDVVTALDRASEALVARRLREARPDDGLLG EEGSDTAGTSGVRWIVDPLDGTVNFLYRLPNWAVSIAAELDGEIVAGVVHAPAMGVTYTAVRGGGAFRWETPVGTDRGGD QGAGTGAGAPLGPTAGEPTKLTGSAVTELGGALVATGFGYTERRRTTQAAVLTRVVPRVRDIRRMGAASLDLCAAAAGIV DAYYERGLHPWDHAAGALIAAEAGLRVGGLDGREVSEDLVIAAPPSLFANLTALLAEHPRADTD >Mature_303_residues STVDAPPSTLRPAPAALLDLGLDVAREAGALLVTGRAGTVAAEATKSSPTDVVTALDRASEALVARRLREARPDDGLLGE EGSDTAGTSGVRWIVDPLDGTVNFLYRLPNWAVSIAAELDGEIVAGVVHAPAMGVTYTAVRGGGAFRWETPVGTDRGGDQ GAGTGAGAPLGPTAGEPTKLTGSAVTELGGALVATGFGYTERRRTTQAAVLTRVVPRVRDIRRMGAASLDLCAAAAGIVD AYYERGLHPWDHAAGALIAAEAGLRVGGLDGREVSEDLVIAAPPSLFANLTALLAEHPRADTD
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=256, Percent_Identity=32.421875, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI221625487, Length=256, Percent_Identity=32.421875, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI7657236, Length=228, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI221625507, Length=133, Percent_Identity=36.8421052631579, Blast_Score=94, Evalue=2e-19, Organism=Escherichia coli, GI1788882, Length=249, Percent_Identity=35.7429718875502, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1790659, Length=143, Percent_Identity=32.8671328671329, Blast_Score=68, Evalue=8e-13, Organism=Caenorhabditis elegans, GI193202570, Length=258, Percent_Identity=28.6821705426357, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI193202572, Length=258, Percent_Identity=25.968992248062, Blast_Score=100, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6320493, Length=257, Percent_Identity=29.9610894941634, Blast_Score=103, Evalue=3e-23, Organism=Drosophila melanogaster, GI24664922, Length=288, Percent_Identity=28.4722222222222, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI21357329, Length=299, Percent_Identity=29.0969899665552, Blast_Score=111, Evalue=8e-25, Organism=Drosophila melanogaster, GI21357303, Length=255, Percent_Identity=29.0196078431373, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI24664926, Length=260, Percent_Identity=28.0769230769231, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI24664918, Length=258, Percent_Identity=30.6201550387597, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI21357957, Length=255, Percent_Identity=28.6274509803922, Blast_Score=103, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 31031; Mature: 30900
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00629 IMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVDAPPSTLRPAPAALLDLGLDVAREAGALLVTGRAGTVAAEATKSSPTDVVTALDRA CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHH SEALVARRLREARPDDGLLGEEGSDTAGTSGVRWIVDPLDGTVNFLYRLPNWAVSIAAEL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEECC DGEIVAGVVHAPAMGVTYTAVRGGGAFRWETPVGTDRGGDQGAGTGAGAPLGPTAGEPTK CCHHEEHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LTGSAVTELGGALVATGFGYTERRRTTQAAVLTRVVPRVRDIRRMGAASLDLCAAAAGIV CCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DAYYERGLHPWDHAAGALIAAEAGLRVGGLDGREVSEDLVIAAPPSLFANLTALLAEHPR HHHHHCCCCCCHHHHCEEEECCCCCEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCC ADTD CCCC >Mature Secondary Structure STVDAPPSTLRPAPAALLDLGLDVAREAGALLVTGRAGTVAAEATKSSPTDVVTALDRA CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHH SEALVARRLREARPDDGLLGEEGSDTAGTSGVRWIVDPLDGTVNFLYRLPNWAVSIAAEL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEECC DGEIVAGVVHAPAMGVTYTAVRGGGAFRWETPVGTDRGGDQGAGTGAGAPLGPTAGEPTK CCHHEEHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LTGSAVTELGGALVATGFGYTERRRTTQAAVLTRVVPRVRDIRRMGAASLDLCAAAAGIV CCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DAYYERGLHPWDHAAGALIAAEAGLRVGGLDGREVSEDLVIAAPPSLFANLTALLAEHPR HHHHHCCCCCCHHHHCEEEECCCCCEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCC ADTD CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]