| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316916
Identifier: 158316916
GI number: 158316916
Start: 6184875
End: 6185750
Strand: Reverse
Name: 158316916
Synonym: Franean1_5160
Alternate gene names: NA
Gene position: 6185750-6184875 (Counterclockwise)
Preceding gene: 158316917
Following gene: 158316915
Centisome position: 68.87
GC content: 71.58
Gene sequence:
>876_bases ATGCCCAGGTACACGCCAAGGAGAGTTTCGCCCTACGTGCTGCTCGGCGTGGCATCCCTGGTCGCCATCGCTGTCGCGCT GGCCGGGATGGCCTTCTGGCCCGGGTCGTCGGATCCACCCCGGCCGCCCCAGGCGGCATCCACGGCGGTGCCCCTGCGTG ATCCCCATGCGCTGACCGGGCGGACGATCGTGCTCGACCCGGGCCACAACGGCGGGAACGGTGCCGCGGGATCGGCCATC AACCGCCTCGTCGACGCCGGCGGGTTCCAGAAGGAATGCGACACCGCCGGTGCGGAGACCGACGCCGGATATCCGGAGCA CGCATTCACCTTCGACGTGGCGACCCGGGCCGCGGGCCTGCTGCGCTCGCGCGGGGCGACGGTGATACTCACCCGCAATG ACGACACGGGCGTCGGTCCCTGCGTCGACGAGCGGGCCCGGATCGGAAATGCGGCCGGCGCGGAGGCTGTGGTCTCCATT CACGCCGACGGCGGGCCGTCCGAAGGCAGCGGATTTCACGTCATCGCGCCTGCGGCCAGTCCGGACGGTGGAAACGGGGG CATTCTCACCGCCTCGGCGCGGCTGGCGGATCTGCTGCGAGGCACCTTCGGTGCGGCGACCGGCCAGCGTCGGGCGGACT ATCTGGGAGATGACGGGATCACGGTCCGCTCGGATCTCGGCGGGCTCAATCTCTCCCGTGTTCCCAAGGTTTTCCTCGAG TGCGGAAACATGCACAACCCGGGCGACGCCGGGCGGATCAGCGACGCTGCCTGGCGGCAGCGGGCGGCCGAGGGCATCGT TGACGGCCTCGCGGCCTTCCTGGTCAGCGCCCCGTCCGGCGCCTCGACCGGCGTGGCCAGGCCGGCCACGGGCTAG
Upstream 100 bases:
>100_bases TTCCGGTCTTCCGGCCCAGCCCTGCCGATCTCGCTCCAGTCAACGCCGGACGCTGGAGGAGGCCGTGTCCAGGAGGGGGC GGACAGAATCGGGGGCTGAC
Downstream 100 bases:
>100_bases CCGGCCCCGAGGGTCGGCGGGCTGGCCGGCTTCGGGCTGTCGCGGTGGGCGCGCCGATGGTCCGGGCTGTGCGCCTCGGC CGTGTGTCGCAAGTGGACCA
Product: cell wall hydrolase/autolysin
Products: NA
Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase; N-Acetymuramyl-L-Alanine Amidase; Glutaminase; Hydrolase; N-Acetylmuramoyl-L-Alanine Amidase-Like Protein; N-Acetymuramyl-L-Alanine Amidase-Related Protein; Cell Wall Glycoprotein Hydrolase; Secreted Protein
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MPRYTPRRVSPYVLLGVASLVAIAVALAGMAFWPGSSDPPRPPQAASTAVPLRDPHALTGRTIVLDPGHNGGNGAAGSAI NRLVDAGGFQKECDTAGAETDAGYPEHAFTFDVATRAAGLLRSRGATVILTRNDDTGVGPCVDERARIGNAAGAEAVVSI HADGGPSEGSGFHVIAPAASPDGGNGGILTASARLADLLRGTFGAATGQRRADYLGDDGITVRSDLGGLNLSRVPKVFLE CGNMHNPGDAGRISDAAWRQRAAEGIVDGLAAFLVSAPSGASTGVARPATG
Sequences:
>Translated_291_residues MPRYTPRRVSPYVLLGVASLVAIAVALAGMAFWPGSSDPPRPPQAASTAVPLRDPHALTGRTIVLDPGHNGGNGAAGSAI NRLVDAGGFQKECDTAGAETDAGYPEHAFTFDVATRAAGLLRSRGATVILTRNDDTGVGPCVDERARIGNAAGAEAVVSI HADGGPSEGSGFHVIAPAASPDGGNGGILTASARLADLLRGTFGAATGQRRADYLGDDGITVRSDLGGLNLSRVPKVFLE CGNMHNPGDAGRISDAAWRQRAAEGIVDGLAAFLVSAPSGASTGVARPATG >Mature_290_residues PRYTPRRVSPYVLLGVASLVAIAVALAGMAFWPGSSDPPRPPQAASTAVPLRDPHALTGRTIVLDPGHNGGNGAAGSAIN RLVDAGGFQKECDTAGAETDAGYPEHAFTFDVATRAAGLLRSRGATVILTRNDDTGVGPCVDERARIGNAAGAEAVVSIH ADGGPSEGSGFHVIAPAASPDGGNGGILTASARLADLLRGTFGAATGQRRADYLGDDGITVRSDLGGLNLSRVPKVFLEC GNMHNPGDAGRISDAAWRQRAAEGIVDGLAAFLVSAPSGASTGVARPATG
Specific function: Unknown
COG id: COG0860
COG function: function code M; N-acetylmuramoyl-L-alanine amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29322; Mature: 29191
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRYTPRRVSPYVLLGVASLVAIAVALAGMAFWPGSSDPPRPPQAASTAVPLRDPHALTG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RTIVLDPGHNGGNGAAGSAINRLVDAGGFQKECDTAGAETDAGYPEHAFTFDVATRAAGL CEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHH LRSRGATVILTRNDDTGVGPCVDERARIGNAAGAEAVVSIHADGGPSEGSGFHVIAPAAS HHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCC PDGGNGGILTASARLADLLRGTFGAATGQRRADYLGDDGITVRSDLGGLNLSRVPKVFLE CCCCCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHH CGNMHNPGDAGRISDAAWRQRAAEGIVDGLAAFLVSAPSGASTGVARPATG HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PRYTPRRVSPYVLLGVASLVAIAVALAGMAFWPGSSDPPRPPQAASTAVPLRDPHALTG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RTIVLDPGHNGGNGAAGSAINRLVDAGGFQKECDTAGAETDAGYPEHAFTFDVATRAAGL CEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHH LRSRGATVILTRNDDTGVGPCVDERARIGNAAGAEAVVSIHADGGPSEGSGFHVIAPAAS HHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCC PDGGNGGILTASARLADLLRGTFGAATGQRRADYLGDDGITVRSDLGGLNLSRVPKVFLE CCCCCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHH CGNMHNPGDAGRISDAAWRQRAAEGIVDGLAAFLVSAPSGASTGVARPATG HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA