| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316836
Identifier: 158316836
GI number: 158316836
Start: 6080051
End: 6080419
Strand: Reverse
Name: 158316836
Synonym: Franean1_5079
Alternate gene names: NA
Gene position: 6080419-6080051 (Counterclockwise)
Preceding gene: 158316838
Following gene: 158316833
Centisome position: 67.7
GC content: 78.05
Gene sequence:
>369_bases GTGCCTGATCAGAACCGCGACGGTACGTGGGGGACCGAGCGCGAGCTGCTCCTCGTGCTGGGGCCCGATCCCGAGGCGGC CCGGGCCGTGCTCGACCTGGTCGCCGGCTGGGGTCAGGTGACGTCCCGGCTGCCACCGCGGCTCGCGCTCGTCGTGCTGC CCGCGGACCGGATCGGTGCGACCGGTGAGCTCGCCGGGGTCGTCGCCGTGCTCGAGGCGGACGTCCCGCCGGCGCTGCGC GAGACGCTCGCCCCCGAGGAGGGGCTGTTCGTCGACGGCTGGCTCGCCCGCGGCCGGAGCAAGCCGACCCGCCCGGGGGA GGGCCGGCGGTGGGACGATCCCGCCGCTCCGGGCGAGCCGCCCCGCTGA
Upstream 100 bases:
>100_bases TCCATCCGCGTTGGTGGTGTCGGCTGTCATTACGGGGGTGGTGGCGATCACGGCGGGGGAGCGGTTGCGCGGGCGCGAGC CCGCAGGACGGAGGACGCGG
Downstream 100 bases:
>100_bases CCGGAGTCTGACGGCCCGCCCCGCCGGTGGGTCAGAAGACGCGGCGCGGCGCCGACCACACGGCCGCGGCGCCTGAGCGG TACAGCAGGTACAGCCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MPDQNRDGTWGTERELLLVLGPDPEAARAVLDLVAGWGQVTSRLPPRLALVVLPADRIGATGELAGVVAVLEADVPPALR ETLAPEEGLFVDGWLARGRSKPTRPGEGRRWDDPAAPGEPPR
Sequences:
>Translated_122_residues MPDQNRDGTWGTERELLLVLGPDPEAARAVLDLVAGWGQVTSRLPPRLALVVLPADRIGATGELAGVVAVLEADVPPALR ETLAPEEGLFVDGWLARGRSKPTRPGEGRRWDDPAAPGEPPR >Mature_121_residues PDQNRDGTWGTERELLLVLGPDPEAARAVLDLVAGWGQVTSRLPPRLALVVLPADRIGATGELAGVVAVLEADVPPALRE TLAPEEGLFVDGWLARGRSKPTRPGEGRRWDDPAAPGEPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13014; Mature: 12883
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDQNRDGTWGTERELLLVLGPDPEAARAVLDLVAGWGQVTSRLPPRLALVVLPADRIGA CCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCC TGELAGVVAVLEADVPPALRETLAPEEGLFVDGWLARGRSKPTRPGEGRRWDDPAAPGEP CCHHHHHHHHHCCCCCHHHHHHCCCCCCEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCC PR CC >Mature Secondary Structure PDQNRDGTWGTERELLLVLGPDPEAARAVLDLVAGWGQVTSRLPPRLALVVLPADRIGA CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCC TGELAGVVAVLEADVPPALRETLAPEEGLFVDGWLARGRSKPTRPGEGRRWDDPAAPGEP CCHHHHHHHHHCCCCCHHHHHHCCCCCCEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCC PR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA