| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is engA [H]
Identifier: 158316815
GI number: 158316815
Start: 6055362
End: 6056750
Strand: Reverse
Name: engA [H]
Synonym: Franean1_5057
Alternate gene names: 158316815
Gene position: 6056750-6055362 (Counterclockwise)
Preceding gene: 158316816
Following gene: 158316813
Centisome position: 67.43
GC content: 74.95
Gene sequence:
>1389_bases ATGAACACCGAAGATCTCGCCGCGTCCGTCGACGACGGCCCTGTGGGCGGTGCCCTCCCGCTGGCGGGAGGGCAGCCCGT CCTCGCCGTCGTCGGCCGGCCGAACGTGGGCAAGTCGACGCTGGTCAACCGCATCCTGGGCCGCCGCGCGGCCGTCGTCG AGGACGTCCCCGGCGTCACCCGTGACCGGGTCGCCTACGACGCGGTGTGGAACGGCCGCCGGTTCACCCTCGTCGACACC GGCGGCTGGGAGCCCGACGCCCGCGGCCTCGCCGCCCGGGTCTCCGACCAGGCCCGCGCCGCGCTCGACACCGCCGACGG CGTGCTGTTCGTGATCGACGCCACCGTCGGCGCGACCGACGCCGACGAGGCCGTCGCCCGGGTGCTGCACCGGTCGGGCC GGCCGGTGATCCTCGCCGCGAACAAGGTCGACGACGCCCGCGCGGAGGCCGACGCCGCCGCGCTGTGGAGCCTCGGGCTG GGCGAGCCGTACCCGGTGTCCGCGCTGCACGGCCGGGGCAGCGGCGACCTGCTGGACGCCGTCCTCGCGGTGCTGCCCGA GGCACCCCGCGAGCGGTTCACCGAGGAGGACGGCCCCCGGCGCGTGGCGCTGATCGGGCGGCCGAACGTCGGCAAGTCCA GCCTGCTCAACAAACTGGCCGGCAGCGAGCGCTCGCTGGTGCACGACGTCGCGGGCACGACCCGCGACCCGGTGGACGAG CTCGTCACCGTCGGCGGCGAGACCTGGATGTTCATCGACACCGCCGGCCTGCGGCGGCGGGTGAAGGAGGCCTCCGGCGC CGAGTACTACTCGTCGCTGCGCACCGCCTCCGCGCTGGAGGCCGCCGAGGTCGCGATCGTCCTGCTCGCCGCGGACGAGC CGGTCACCGAGCAGGACCAGCGGATCATCAGCATGGTCACCGACGCCGGCCGGGCCCTCGTCCTCGCCTTCAACAAGTGG GACACGCTCGACACCGAGCGCCGTCTCGACCTGGAGCAGGAGATCGTCCGCGAGCTGGGCCGGGTGGCCTGGGCGCCGCG GGTGAACATCTCGGCCCGCACCGGCCGCGCCACCGACCGGCTCGCCCCGGCGCTGCGGACGTCCCTCGACTCGTGGGGAA CGCGCATCCCGACCGGCCGCCTCAACGCCTGGATCGGAGAGGTCGTGGCGGCCACGCCGCCGCCGTCGCGGGGCGGGAAG CTGCCGCGGGTGCTGTTCGCGACCCAGGCCGGGGTGCGCCCGCCGCGCTTCGTCGTGTTCACCACCGGATTCCTCGAGCC GGCCTACCGGCGTTTCCTGGAGCGCAAACTGCGCGAGGACTTCGGCTTCGCCGGCACGCCCATCGAGATCTCGATCCGGG TCCGCGAGCGTCCCGACCGCCACCGCTAG
Upstream 100 bases:
>100_bases CGCTGTTTGTTCCGAGTGCGCCGGACGGGTCCGCCGTCCGCGGAAGGACAGCTCGCAGCCAGTTCACCGAGATGTCCAGC CCAAGCGGAGTGCAGCCGTC
Downstream 100 bases:
>100_bases ACCCCACCCCGCGGCCTCGGGATGTGTGGTGCCGGACGGCTCCCCTCACGCCCCGGGACTGAGCCGCGCTGTCCTCGCAT GTCGGCGGGATCGGGCACGG
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MNTEDLAASVDDGPVGGALPLAGGQPVLAVVGRPNVGKSTLVNRILGRRAAVVEDVPGVTRDRVAYDAVWNGRRFTLVDT GGWEPDARGLAARVSDQARAALDTADGVLFVIDATVGATDADEAVARVLHRSGRPVILAANKVDDARAEADAAALWSLGL GEPYPVSALHGRGSGDLLDAVLAVLPEAPRERFTEEDGPRRVALIGRPNVGKSSLLNKLAGSERSLVHDVAGTTRDPVDE LVTVGGETWMFIDTAGLRRRVKEASGAEYYSSLRTASALEAAEVAIVLLAADEPVTEQDQRIISMVTDAGRALVLAFNKW DTLDTERRLDLEQEIVRELGRVAWAPRVNISARTGRATDRLAPALRTSLDSWGTRIPTGRLNAWIGEVVAATPPPSRGGK LPRVLFATQAGVRPPRFVVFTTGFLEPAYRRFLERKLREDFGFAGTPIEISIRVRERPDRHR
Sequences:
>Translated_462_residues MNTEDLAASVDDGPVGGALPLAGGQPVLAVVGRPNVGKSTLVNRILGRRAAVVEDVPGVTRDRVAYDAVWNGRRFTLVDT GGWEPDARGLAARVSDQARAALDTADGVLFVIDATVGATDADEAVARVLHRSGRPVILAANKVDDARAEADAAALWSLGL GEPYPVSALHGRGSGDLLDAVLAVLPEAPRERFTEEDGPRRVALIGRPNVGKSSLLNKLAGSERSLVHDVAGTTRDPVDE LVTVGGETWMFIDTAGLRRRVKEASGAEYYSSLRTASALEAAEVAIVLLAADEPVTEQDQRIISMVTDAGRALVLAFNKW DTLDTERRLDLEQEIVRELGRVAWAPRVNISARTGRATDRLAPALRTSLDSWGTRIPTGRLNAWIGEVVAATPPPSRGGK LPRVLFATQAGVRPPRFVVFTTGFLEPAYRRFLERKLREDFGFAGTPIEISIRVRERPDRHR >Mature_462_residues MNTEDLAASVDDGPVGGALPLAGGQPVLAVVGRPNVGKSTLVNRILGRRAAVVEDVPGVTRDRVAYDAVWNGRRFTLVDT GGWEPDARGLAARVSDQARAALDTADGVLFVIDATVGATDADEAVARVLHRSGRPVILAANKVDDARAEADAAALWSLGL GEPYPVSALHGRGSGDLLDAVLAVLPEAPRERFTEEDGPRRVALIGRPNVGKSSLLNKLAGSERSLVHDVAGTTRDPVDE LVTVGGETWMFIDTAGLRRRVKEASGAEYYSSLRTASALEAAEVAIVLLAADEPVTEQDQRIISMVTDAGRALVLAFNKW DTLDTERRLDLEQEIVRELGRVAWAPRVNISARTGRATDRLAPALRTSLDSWGTRIPTGRLNAWIGEVVAATPPPSRGGK LPRVLFATQAGVRPPRFVVFTTGFLEPAYRRFLERKLREDFGFAGTPIEISIRVRERPDRHR
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=461, Percent_Identity=36.0086767895879, Blast_Score=274, Evalue=8e-75, Organism=Escherichia coli, GI1788919, Length=177, Percent_Identity=31.638418079096, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI2367268, Length=63, Percent_Identity=53.968253968254, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323665, Length=176, Percent_Identity=25, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI45550813, Length=150, Percent_Identity=36, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 49750; Mature: 49750
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTEDLAASVDDGPVGGALPLAGGQPVLAVVGRPNVGKSTLVNRILGRRAAVVEDVPGVT CCCHHHEECCCCCCCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCC RDRVAYDAVWNGRRFTLVDTGGWEPDARGLAARVSDQARAALDTADGVLFVIDATVGATD HHHEEEHEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC ADEAVARVLHRSGRPVILAANKVDDARAEADAAALWSLGLGEPYPVSALHGRGSGDLLDA HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHH VLAVLPEAPRERFTEEDGPRRVALIGRPNVGKSSLLNKLAGSERSLVHDVAGTTRDPVDE HHHHCCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHH LVTVGGETWMFIDTAGLRRRVKEASGAEYYSSLRTASALEAAEVAIVLLAADEPVTEQDQ HHHCCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHH RIISMVTDAGRALVLAFNKWDTLDTERRLDLEQEIVRELGRVAWAPRVNISARTGRATDR HHHHHHHCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCEECCCCCCHHH LAPALRTSLDSWGTRIPTGRLNAWIGEVVAATPPPSRGGKLPRVLFATQAGVRPPRFVVF HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHCCCCCCEEEEE TTGFLEPAYRRFLERKLREDFGFAGTPIEISIRVRERPDRHR ECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MNTEDLAASVDDGPVGGALPLAGGQPVLAVVGRPNVGKSTLVNRILGRRAAVVEDVPGVT CCCHHHEECCCCCCCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCC RDRVAYDAVWNGRRFTLVDTGGWEPDARGLAARVSDQARAALDTADGVLFVIDATVGATD HHHEEEHEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC ADEAVARVLHRSGRPVILAANKVDDARAEADAAALWSLGLGEPYPVSALHGRGSGDLLDA HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHH VLAVLPEAPRERFTEEDGPRRVALIGRPNVGKSSLLNKLAGSERSLVHDVAGTTRDPVDE HHHHCCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHH LVTVGGETWMFIDTAGLRRRVKEASGAEYYSSLRTASALEAAEVAIVLLAADEPVTEQDQ HHHCCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHH RIISMVTDAGRALVLAFNKWDTLDTERRLDLEQEIVRELGRVAWAPRVNISARTGRATDR HHHHHHHCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCEECCCCCCHHH LAPALRTSLDSWGTRIPTGRLNAWIGEVVAATPPPSRGGKLPRVLFATQAGVRPPRFVVF HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHCCCCCCEEEEE TTGFLEPAYRRFLERKLREDFGFAGTPIEISIRVRERPDRHR ECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11572948; 12692562 [H]