| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316813
Identifier: 158316813
GI number: 158316813
Start: 6053245
End: 6053979
Strand: Reverse
Name: 158316813
Synonym: Franean1_5055
Alternate gene names: NA
Gene position: 6053979-6053245 (Counterclockwise)
Preceding gene: 158316815
Following gene: 158316812
Centisome position: 67.4
GC content: 73.06
Gene sequence:
>735_bases GTGGATCGACCACGTCGACCTCGCCTGGTCGCTGGTGCGGCCCGGCGGACGGGTGACCGCAATCGTGCCCGCCGGCCGCC GCTGCCGGAGGACGGACTCCAGATCGGCCAGGATGACGCCGGAACCCGGCGCACCTACCAGGAGCGTTACCCGGCCTCGA CCCTCACCGCCGGGCACGCCACCAACATCGAGGCGTGCTGGGCCTGCCACGCGCTGCGCGAGATCGCCGCGTGGAGCACC ACCGTGGACATACGAACGGGCGGCGGTGCCGACGAGCCGCGCCGCTGCCAGCTCGCCCGGGAAAGCCTCGCCGGGCGCGT CGACAGCGTTAACGGGAAGTTCGCCCACTGGCGGGAGCCCGTCGAGTCCGCCCCGGAAGCGGCGCGTGAGATCAAGGATG TGGCAGGGCTGCGTCTGGCCCGCTCCGGGCGCGGCAACTGGGCAGTCACGCGCGTGATCGACAACCGGGTGCTGCTCGGC GGGATCGGCGCGCAGGCCAAGGCCACCGCCTCCGCCCGTGCGCTGGCCGCCCTGGGCGACCTGGCCACCGTCCCGGGTTA CGTCCTGCCCTACCTGCCCGCGCTGCGCGATGACGTCGAGGCGATCAAGTGGGAGGCGACGGGCCTCAGTTCCGAGGCGT CCGCCTGGGCTGAGAACTGCCGCACCCGTGCCGCCGAAATCCGCCAGGCGGTGGCCGAGAAGGCGGCGAAGGACGCCGCG TGGAGGAATCGATGA
Upstream 100 bases:
>100_bases GCTTCGAGGACGTCGCCCGACGCCACGTCCAGGTTCAGGCCCGGCTATTCGACGCCGTGGTGATGAACCCGCCCTTCGCC TTGTCCGGCGCGGCCACCGC
Downstream 100 bases:
>100_bases AGAGTTCAGCCGTCAATGCGCCGTTGGAATGGGTGCCCGGAGTGCACGTCCTCGTCGACGACGACGCGGAGACCTGCGGC GAAGTGGCCGCTCGTCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MDRPRRPRLVAGAARRTGDRNRARRPPLPEDGLQIGQDDAGTRRTYQERYPASTLTAGHATNIEACWACHALREIAAWST TVDIRTGGGADEPRRCQLARESLAGRVDSVNGKFAHWREPVESAPEAAREIKDVAGLRLARSGRGNWAVTRVIDNRVLLG GIGAQAKATASARALAALGDLATVPGYVLPYLPALRDDVEAIKWEATGLSSEASAWAENCRTRAAEIRQAVAEKAAKDAA WRNR
Sequences:
>Translated_244_residues MDRPRRPRLVAGAARRTGDRNRARRPPLPEDGLQIGQDDAGTRRTYQERYPASTLTAGHATNIEACWACHALREIAAWST TVDIRTGGGADEPRRCQLARESLAGRVDSVNGKFAHWREPVESAPEAAREIKDVAGLRLARSGRGNWAVTRVIDNRVLLG GIGAQAKATASARALAALGDLATVPGYVLPYLPALRDDVEAIKWEATGLSSEASAWAENCRTRAAEIRQAVAEKAAKDAA WRNR >Mature_244_residues MDRPRRPRLVAGAARRTGDRNRARRPPLPEDGLQIGQDDAGTRRTYQERYPASTLTAGHATNIEACWACHALREIAAWST TVDIRTGGGADEPRRCQLARESLAGRVDSVNGKFAHWREPVESAPEAAREIKDVAGLRLARSGRGNWAVTRVIDNRVLLG GIGAQAKATASARALAALGDLATVPGYVLPYLPALRDDVEAIKWEATGLSSEASAWAENCRTRAAEIRQAVAEKAAKDAA WRNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26451; Mature: 26451
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRPRRPRLVAGAARRTGDRNRARRPPLPEDGLQIGQDDAGTRRTYQERYPASTLTAGHA CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCC TNIEACWACHALREIAAWSTTVDIRTGGGADEPRRCQLARESLAGRVDSVNGKFAHWREP CCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHH VESAPEAAREIKDVAGLRLARSGRGNWAVTRVIDNRVLLGGIGAQAKATASARALAALGD HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHH LATVPGYVLPYLPALRDDVEAIKWEATGLSSEASAWAENCRTRAAEIRQAVAEKAAKDAA HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRNR CCCC >Mature Secondary Structure MDRPRRPRLVAGAARRTGDRNRARRPPLPEDGLQIGQDDAGTRRTYQERYPASTLTAGHA CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCC TNIEACWACHALREIAAWSTTVDIRTGGGADEPRRCQLARESLAGRVDSVNGKFAHWREP CCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHH VESAPEAAREIKDVAGLRLARSGRGNWAVTRVIDNRVLLGGIGAQAKATASARALAALGD HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHH LATVPGYVLPYLPALRDDVEAIKWEATGLSSEASAWAENCRTRAAEIRQAVAEKAAKDAA HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRNR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA