| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316793
Identifier: 158316793
GI number: 158316793
Start: 6033731
End: 6036532
Strand: Reverse
Name: 158316793
Synonym: Franean1_5035
Alternate gene names: NA
Gene position: 6036532-6033731 (Counterclockwise)
Preceding gene: 158316797
Following gene: 158316788
Centisome position: 67.21
GC content: 71.88
Gene sequence:
>2802_bases GTGTCGGCGCGCCTCGTCGCTGTTGCACCGCCGCTGCTCGCGCGCTGGCGGGAGGCCCGGCAGCGCCGGCTGTGGGCGGC GGCGGACCATCCAGCCCCCCCGGGGGCCACCACGCCACTGGTGATCGATCCCGACCTGCTGGTCGCGGCCGACCTGCGTA ACCGGGTGGCCGGTGATCCGGCGTTCGACCTGTGGACCGCCCGCCGGCAGTGGGTCGACGCCACCTTCGCAGCCGTCCGC GCCAGCCGGGCGGCACTCGGCGGGGCTGCCCCGGCCGACGTATTCGACAGGGTCGTCGCCGACGTCGTGGGCGCACCCCT CAGCGAGCTGACGGAGCTCGACCAGCGGCGTCGGCGCGCGAGCTCGATTGATGCCGAACTGGACGCGCTCCATCTGCTCC CGGCGGAGCTGGCGCGGCTGGTGCGGCTGCGTGAGATGGCCGCCACCGGCATCGTCACCGACGACGAGTGGCGGGAACTC GACCACCTGCTCACGCAGGTGCGTAAGCGCCAGCGGAGGGCGGACTGGCTCGCAGCAGAGGCCGCGATCGCGCTGACGCC GGAGCACTTCGTGCTGTCGACCGGGCCGTGGTCGCCGGTTGCGTGGCGCGCCAGCGCCGTCGAGCGGGCGGATTGGCTGG ACCGCCTGCAGGCGCGGATGGACCAGGAGAGCGCGGTCCGCGAAGCCCTGCGGACGGCGGTCAGCGAGGTCGAGCAGGCG GCGCTGCCCCGGTGCCGGGACGGCCTGATCTCGCTGCTCGGCACGACCGGACCGGCCGAGGAGGCTGACCGGCTGACCGA ACTGCTGCTGGTCGACTTCAGCGGCGGCGGCACGGAACTGACGACCCGTGTGGACCAGGCAATCGAGACGGTGCAGTTGC TGTTCCTCGGCCTGCGGTCCGGCCGACTGCCGTCGGCGCACCCGGCGCTGGCCTGGACCATCGAGCCGGGCGGCGCGGCC AGTCTCGACGAGGAATGGGCGTGGATGGGGGGCTACGACTCCTGGCGCGCGGCCCTGTTCCTGTTCACCTATCCCCAGGA CCTGCTCGCCCCCTCGGTCCGCGACACCAGCGCCGCGGTCCCCGAGACGGCCCGCCCCACGCCCCCCTTCCGAACGCTGG TCACCGCGCTGCGCGGCCAGCAGCGGCCACGTCGCGACATCGTGCTGACCGCGGCAAACGAGTTCCTGGCGACGATCCGG CCGACGCTGGTGAACTTCCCGATCCGGCCCCTGCCCTACACCGCCGGCGACGAGGGCCTGCGCGACGGCCTGCTGGCGTT CGGGTACACCGACCGTCCGACCGCGGCTGACCTGGCCCGCATCCGCGACCTGTCCGCGCGTGTGCTGATCACCCTTGCGG TCGGACACCCGGGACTTCCGAACTACCTGCAGGAGCTCTTCTACTATGTGCCGCTGCTGGTGGCGCAGAACCTGCAACGT GGCGGCGACTACGTGGCCGCGCTCGACTGGTACCGCACGATCTACGCCTTCGACCAGACTGACCTGCCCGACTTCTTCGT ACCCTCGGACGAACGCAAGATCTACTACGGGCTTCAGCAGGAAGGGAACGCGCCGGACGCCCTGTCGCGTGGCATCCACT GGCTGCGCGACGAGGTCAATCCGCACGCCCTGGCCGGTCAGTGGTCCAATCCCTACACGCGGTACACCTTCACCTCGATC GCGCGCTGCTTCCTGGAATACGGGGACTTCGAGTTCACCCGGGACACCGGCGAGTCCCGGGCCAGGGCCCGGTCGTTGTA CCTGACGGCGCGGTCGCTGCTGCGCGCGCCGGAGCTGGCGAACCTCGCGGGCCCGGGCCTGGGCGTGGCGGTCCCGAGCC CCGTGCTGACCGCGTTACTCACCCGGGTTGACAACCAGCTCCGCAAGCTTCGGCAGGGCCGTAACATCGCCGGCCTGCGC CGTCCGGTCGAGCCTCCGGACGCGGCCGCGTCGACGTCGGCCGGCATGCCCTATATCGGCGCTGGCGGTCAGCTGGTCAT CCCCGCGCTGAACCCACCGCGACCCACGCCGTACCACTTCACGGTGTTGCTGGAGCGAGCCCGGCAGCTTGCCGCCACCG CCGCCCAGGTGGAGGCGTCCTACCTGAGCGCGCTGGAGAAGCGCGACGCCGAGGCCTACGGCCGGTTGACCGCCGGCCTG GATCTGGACGTCGCTCGGGCCGGCGAGGCCCTCCAGTCGTTGCGGGTCAGCGAGGCCCAGAAGGGCACCGAGCTTGCCCG CCGGCAGAAGGCCGCCAGCGACGTACGCGCGACCACGTTCCAGCAGTGGATCGACGACGGCCCGAACGAATGGGAGCGCA GCCTCGTCCGGGACTACGACGAGGCCCGGGTCTACCGTGACTGGATGGTGGGACTGGACGCGGCCATCACGGCGGCGCAG GCTGTCGCCTCCGTCTCCTCCATCCCGGGTGCGGCCGCCGCGTCGACGGTTGGCGGGCTTGCCGTGGGCCGGGCCGTGAA CGCGACGAGCCTCAACCGCACCGAGCAGGACATCGCGCTGAACACGCTGCGCGCCAGCCAGGAACGCCGCCAGGACGAGT GGGAGCTCCAGCTCGCGACGGCCACCCAGGACGGCCTGGTCGCGCAGGAGGCGATCCTGCTCGCGCTCGACCACGAGGCC ATCGTCGGACAGGAGGCCCGGATCGCCGGCCTCCAGGCGTTCGAGGCCCAGTCGGTGACCGACTTCCTGACCCGCAAGTT CACCAGTGCCGAGCTCTACGAATGGATGAGCGGCGTCCTGGGGAACACTTCCTCCAGCAGGCCACCGGCACGGCGCTGCT AG
Upstream 100 bases:
>100_bases CCCGGAGGAGCGCCTTTCGTTTGTGGCGTGACCAGGGATTGGCGACCGCCGCCGGAGCCTGTGGAACCGCGCCTTGTGTC CCGCGCCCCGGCGAGGCATC
Downstream 100 bases:
>100_bases CCCAGAGCCAGCTTTCCTTCGAGCGCCAGCAGGCGTCCCCCAACTACGTCCAGAACGACTACTGGACGCCGACCGAGGAC ACCGCGACCGTGCCGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 933; Mature: 932
Protein sequence:
>933_residues MSARLVAVAPPLLARWREARQRRLWAAADHPAPPGATTPLVIDPDLLVAADLRNRVAGDPAFDLWTARRQWVDATFAAVR ASRAALGGAAPADVFDRVVADVVGAPLSELTELDQRRRRASSIDAELDALHLLPAELARLVRLREMAATGIVTDDEWREL DHLLTQVRKRQRRADWLAAEAAIALTPEHFVLSTGPWSPVAWRASAVERADWLDRLQARMDQESAVREALRTAVSEVEQA ALPRCRDGLISLLGTTGPAEEADRLTELLLVDFSGGGTELTTRVDQAIETVQLLFLGLRSGRLPSAHPALAWTIEPGGAA SLDEEWAWMGGYDSWRAALFLFTYPQDLLAPSVRDTSAAVPETARPTPPFRTLVTALRGQQRPRRDIVLTAANEFLATIR PTLVNFPIRPLPYTAGDEGLRDGLLAFGYTDRPTAADLARIRDLSARVLITLAVGHPGLPNYLQELFYYVPLLVAQNLQR GGDYVAALDWYRTIYAFDQTDLPDFFVPSDERKIYYGLQQEGNAPDALSRGIHWLRDEVNPHALAGQWSNPYTRYTFTSI ARCFLEYGDFEFTRDTGESRARARSLYLTARSLLRAPELANLAGPGLGVAVPSPVLTALLTRVDNQLRKLRQGRNIAGLR RPVEPPDAAASTSAGMPYIGAGGQLVIPALNPPRPTPYHFTVLLERARQLAATAAQVEASYLSALEKRDAEAYGRLTAGL DLDVARAGEALQSLRVSEAQKGTELARRQKAASDVRATTFQQWIDDGPNEWERSLVRDYDEARVYRDWMVGLDAAITAAQ AVASVSSIPGAAAASTVGGLAVGRAVNATSLNRTEQDIALNTLRASQERRQDEWELQLATATQDGLVAQEAILLALDHEA IVGQEARIAGLQAFEAQSVTDFLTRKFTSAELYEWMSGVLGNTSSSRPPARRC
Sequences:
>Translated_933_residues MSARLVAVAPPLLARWREARQRRLWAAADHPAPPGATTPLVIDPDLLVAADLRNRVAGDPAFDLWTARRQWVDATFAAVR ASRAALGGAAPADVFDRVVADVVGAPLSELTELDQRRRRASSIDAELDALHLLPAELARLVRLREMAATGIVTDDEWREL DHLLTQVRKRQRRADWLAAEAAIALTPEHFVLSTGPWSPVAWRASAVERADWLDRLQARMDQESAVREALRTAVSEVEQA ALPRCRDGLISLLGTTGPAEEADRLTELLLVDFSGGGTELTTRVDQAIETVQLLFLGLRSGRLPSAHPALAWTIEPGGAA SLDEEWAWMGGYDSWRAALFLFTYPQDLLAPSVRDTSAAVPETARPTPPFRTLVTALRGQQRPRRDIVLTAANEFLATIR PTLVNFPIRPLPYTAGDEGLRDGLLAFGYTDRPTAADLARIRDLSARVLITLAVGHPGLPNYLQELFYYVPLLVAQNLQR GGDYVAALDWYRTIYAFDQTDLPDFFVPSDERKIYYGLQQEGNAPDALSRGIHWLRDEVNPHALAGQWSNPYTRYTFTSI ARCFLEYGDFEFTRDTGESRARARSLYLTARSLLRAPELANLAGPGLGVAVPSPVLTALLTRVDNQLRKLRQGRNIAGLR RPVEPPDAAASTSAGMPYIGAGGQLVIPALNPPRPTPYHFTVLLERARQLAATAAQVEASYLSALEKRDAEAYGRLTAGL DLDVARAGEALQSLRVSEAQKGTELARRQKAASDVRATTFQQWIDDGPNEWERSLVRDYDEARVYRDWMVGLDAAITAAQ AVASVSSIPGAAAASTVGGLAVGRAVNATSLNRTEQDIALNTLRASQERRQDEWELQLATATQDGLVAQEAILLALDHEA IVGQEARIAGLQAFEAQSVTDFLTRKFTSAELYEWMSGVLGNTSSSRPPARRC >Mature_932_residues SARLVAVAPPLLARWREARQRRLWAAADHPAPPGATTPLVIDPDLLVAADLRNRVAGDPAFDLWTARRQWVDATFAAVRA SRAALGGAAPADVFDRVVADVVGAPLSELTELDQRRRRASSIDAELDALHLLPAELARLVRLREMAATGIVTDDEWRELD HLLTQVRKRQRRADWLAAEAAIALTPEHFVLSTGPWSPVAWRASAVERADWLDRLQARMDQESAVREALRTAVSEVEQAA LPRCRDGLISLLGTTGPAEEADRLTELLLVDFSGGGTELTTRVDQAIETVQLLFLGLRSGRLPSAHPALAWTIEPGGAAS LDEEWAWMGGYDSWRAALFLFTYPQDLLAPSVRDTSAAVPETARPTPPFRTLVTALRGQQRPRRDIVLTAANEFLATIRP TLVNFPIRPLPYTAGDEGLRDGLLAFGYTDRPTAADLARIRDLSARVLITLAVGHPGLPNYLQELFYYVPLLVAQNLQRG GDYVAALDWYRTIYAFDQTDLPDFFVPSDERKIYYGLQQEGNAPDALSRGIHWLRDEVNPHALAGQWSNPYTRYTFTSIA RCFLEYGDFEFTRDTGESRARARSLYLTARSLLRAPELANLAGPGLGVAVPSPVLTALLTRVDNQLRKLRQGRNIAGLRR PVEPPDAAASTSAGMPYIGAGGQLVIPALNPPRPTPYHFTVLLERARQLAATAAQVEASYLSALEKRDAEAYGRLTAGLD LDVARAGEALQSLRVSEAQKGTELARRQKAASDVRATTFQQWIDDGPNEWERSLVRDYDEARVYRDWMVGLDAAITAAQA VASVSSIPGAAAASTVGGLAVGRAVNATSLNRTEQDIALNTLRASQERRQDEWELQLATATQDGLVAQEAILLALDHEAI VGQEARIAGLQAFEAQSVTDFLTRKFTSAELYEWMSGVLGNTSSSRPPARRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102227; Mature: 102096
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARLVAVAPPLLARWREARQRRLWAAADHPAPPGATTPLVIDPDLLVAADLRNRVAGDP CCCCEEEECCHHHHHHHHHHHHHHECCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCC AFDLWTARRQWVDATFAAVRASRAALGGAAPADVFDRVVADVVGAPLSELTELDQRRRRA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SSIDAELDALHLLPAELARLVRLREMAATGIVTDDEWRELDHLLTQVRKRQRRADWLAAE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AAIALTPEHFVLSTGPWSPVAWRASAVERADWLDRLQARMDQESAVREALRTAVSEVEQA HEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ALPRCRDGLISLLGTTGPAEEADRLTELLLVDFSGGGTELTTRVDQAIETVQLLFLGLRS HCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC GRLPSAHPALAWTIEPGGAASLDEEWAWMGGYDSWRAALFLFTYPQDLLAPSVRDTSAAV CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHEEEEEECCHHHHCCCCCCCCCCC PETARPTPPFRTLVTALRGQQRPRRDIVLTAANEFLATIRPTLVNFPIRPLPYTAGDEGL CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHH RDGLLAFGYTDRPTAADLARIRDLSARVLITLAVGHPGLPNYLQELFYYVPLLVAQNLQR HCCCEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHC GGDYVAALDWYRTIYAFDQTDLPDFFVPSDERKIYYGLQQEGNAPDALSRGIHWLRDEVN CCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCC PHALAGQWSNPYTRYTFTSIARCFLEYGDFEFTRDTGESRARARSLYLTARSLLRAPELA CCEECCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHH NLAGPGLGVAVPSPVLTALLTRVDNQLRKLRQGRNIAGLRRPVEPPDAAASTSAGMPYIG HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEC AGGQLVIPALNPPRPTPYHFTVLLERARQLAATAAQVEASYLSALEKRDAEAYGRLTAGL CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLDVARAGEALQSLRVSEAQKGTELARRQKAASDVRATTFQQWIDDGPNEWERSLVRDYD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH EARVYRDWMVGLDAAITAAQAVASVSSIPGAAAASTVGGLAVGRAVNATSLNRTEQDIAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHH NTLRASQERRQDEWELQLATATQDGLVAQEAILLALDHEAIVGQEARIAGLQAFEAQSVT HHHHHHHHHCCCHHEEEEEECCCCCHHHHHHHHEEECCHHHHCCCHHHHHHHHHHHHHHH DFLTRKFTSAELYEWMSGVLGNTSSSRPPARRC HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SARLVAVAPPLLARWREARQRRLWAAADHPAPPGATTPLVIDPDLLVAADLRNRVAGDP CCCEEEECCHHHHHHHHHHHHHHECCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCC AFDLWTARRQWVDATFAAVRASRAALGGAAPADVFDRVVADVVGAPLSELTELDQRRRRA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SSIDAELDALHLLPAELARLVRLREMAATGIVTDDEWRELDHLLTQVRKRQRRADWLAAE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AAIALTPEHFVLSTGPWSPVAWRASAVERADWLDRLQARMDQESAVREALRTAVSEVEQA HEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ALPRCRDGLISLLGTTGPAEEADRLTELLLVDFSGGGTELTTRVDQAIETVQLLFLGLRS HCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC GRLPSAHPALAWTIEPGGAASLDEEWAWMGGYDSWRAALFLFTYPQDLLAPSVRDTSAAV CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHEEEEEECCHHHHCCCCCCCCCCC PETARPTPPFRTLVTALRGQQRPRRDIVLTAANEFLATIRPTLVNFPIRPLPYTAGDEGL CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHH RDGLLAFGYTDRPTAADLARIRDLSARVLITLAVGHPGLPNYLQELFYYVPLLVAQNLQR HCCCEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHC GGDYVAALDWYRTIYAFDQTDLPDFFVPSDERKIYYGLQQEGNAPDALSRGIHWLRDEVN CCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCC PHALAGQWSNPYTRYTFTSIARCFLEYGDFEFTRDTGESRARARSLYLTARSLLRAPELA CCEECCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHH NLAGPGLGVAVPSPVLTALLTRVDNQLRKLRQGRNIAGLRRPVEPPDAAASTSAGMPYIG HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEC AGGQLVIPALNPPRPTPYHFTVLLERARQLAATAAQVEASYLSALEKRDAEAYGRLTAGL CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLDVARAGEALQSLRVSEAQKGTELARRQKAASDVRATTFQQWIDDGPNEWERSLVRDYD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH EARVYRDWMVGLDAAITAAQAVASVSSIPGAAAASTVGGLAVGRAVNATSLNRTEQDIAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHH NTLRASQERRQDEWELQLATATQDGLVAQEAILLALDHEAIVGQEARIAGLQAFEAQSVT HHHHHHHHHCCCHHEEEEEECCCCCHHHHHHHHEEECCHHHHCCCHHHHHHHHHHHHHHH DFLTRKFTSAELYEWMSGVLGNTSSSRPPARRC HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA