| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316784
Identifier: 158316784
GI number: 158316784
Start: 6017124
End: 6017720
Strand: Reverse
Name: 158316784
Synonym: Franean1_5023
Alternate gene names: NA
Gene position: 6017720-6017124 (Counterclockwise)
Preceding gene: 158316787
Following gene: 158316782
Centisome position: 67.0
GC content: 70.18
Gene sequence:
>597_bases GTGCGCAGGCTGGTCTACTTCGTGGCGTCCACCGTCGACGGGTTCGTCGCGGGTCCGGACGGCGCCGACCCCACCGGTCC CGACGGGTTCTGGCCGGTGCCGCAGGACTACGTTGAGCATCTCGCCACCGAGTACCCGGAGACCCTGCCCGGTCCGGCGC GGGCGGCCCTCGGCGTCACCGCTGCGGGGATCCACTTTGACACTGTCCTGGAAGGCCGGCGCAGCTACGAGGTCGGGCTG CGGGTCGGCCTGACGAACGCCTTCCCGCACCTGCGGCACCTGGTGTTCTCGCGAACCCTGACCGTGAGCCCGGACCCGGG CGTGGAGCTGGTCGCCGACGACCCGGTCGCGACGGTGCGGGAGCTGAAGCGGCAGGACGGCAAGGACGTCTGGCTGGTCG GTGGGGGCGAGCTCGCCGGCGCCCTCTACCAGGAGATCGATGAGCTTGTCGTCAAGCTGGGGCCGCTGACTCTCGGCACG GGTATCCCGCTGTTCTCCCGTACCGCCGCGTTCGACCCGAGGATCTGGGTGCTGGCCGACCACTCCGTTTTGAAGAGCGG GGCGGTCTTCCTGACCTACCGTCGGTCACCCTTGTAG
Upstream 100 bases:
>100_bases GCCTGACATGCCGTCGGCTGGTCAGAATCATGGGTGGGTTCGTCCGTGGGACGCGCCGTCGGCCGTGACCGGCGTCGGTT CCGACCTTGAGGAGTGGTTC
Downstream 100 bases:
>100_bases CTGGGACGGCGGAGTCCCGGCGCCGGTTCGCGAGTGCCGCCGTTACGGAGCTCGCGGTGAGTCCGGGGCTGCTGTCGTTG GCGGTGCCTGCCTGGCGACT
Product: deaminase-reductase domain-containing protein
Products: NA
Alternate protein names: Bifunctional Deaminase-Reductase Domain-Containing Protein; Deaminase-Reductase Domain-Containing Protein; Dihydrofolate Reductase Family Protein; Bifunctional Deaminase-Reductase Domain Protein; RibD Domain-Containing Protein; Riboflavin Biosynthesis Protein RibD; Bifunctional Deaminase-Reductase Domain Containing Protein; Ribd Domain Protein; Riboflavin Biosynthesis RibD Domain-Containing Protein
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRRLVYFVASTVDGFVAGPDGADPTGPDGFWPVPQDYVEHLATEYPETLPGPARAALGVTAAGIHFDTVLEGRRSYEVGL RVGLTNAFPHLRHLVFSRTLTVSPDPGVELVADDPVATVRELKRQDGKDVWLVGGGELAGALYQEIDELVVKLGPLTLGT GIPLFSRTAAFDPRIWVLADHSVLKSGAVFLTYRRSPL
Sequences:
>Translated_198_residues MRRLVYFVASTVDGFVAGPDGADPTGPDGFWPVPQDYVEHLATEYPETLPGPARAALGVTAAGIHFDTVLEGRRSYEVGL RVGLTNAFPHLRHLVFSRTLTVSPDPGVELVADDPVATVRELKRQDGKDVWLVGGGELAGALYQEIDELVVKLGPLTLGT GIPLFSRTAAFDPRIWVLADHSVLKSGAVFLTYRRSPL >Mature_198_residues MRRLVYFVASTVDGFVAGPDGADPTGPDGFWPVPQDYVEHLATEYPETLPGPARAALGVTAAGIHFDTVLEGRRSYEVGL RVGLTNAFPHLRHLVFSRTLTVSPDPGVELVADDPVATVRELKRQDGKDVWLVGGGELAGALYQEIDELVVKLGPLTLGT GIPLFSRTAAFDPRIWVLADHSVLKSGAVFLTYRRSPL
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21390; Mature: 21390
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLVYFVASTVDGFVAGPDGADPTGPDGFWPVPQDYVEHLATEYPETLPGPARAALGVT CCCEEEEEEHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHE AAGIHFDTVLEGRRSYEVGLRVGLTNAFPHLRHLVFSRTLTVSPDPGVELVADDPVATVR ECCEEHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHCEEEECCCCCEEEEECCCHHHHH ELKRQDGKDVWLVGGGELAGALYQEIDELVVKLGPLTLGTGIPLFSRTAAFDPRIWVLAD HHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCEEEEEEC HSVLKSGAVFLTYRRSPL CHHHHCCCEEEEEECCCC >Mature Secondary Structure MRRLVYFVASTVDGFVAGPDGADPTGPDGFWPVPQDYVEHLATEYPETLPGPARAALGVT CCCEEEEEEHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHE AAGIHFDTVLEGRRSYEVGLRVGLTNAFPHLRHLVFSRTLTVSPDPGVELVADDPVATVR ECCEEHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHCEEEECCCCCEEEEECCCHHHHH ELKRQDGKDVWLVGGGELAGALYQEIDELVVKLGPLTLGTGIPLFSRTAAFDPRIWVLAD HHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCEEEEEEC HSVLKSGAVFLTYRRSPL CHHHHCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA