| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316782
Identifier: 158316782
GI number: 158316782
Start: 6016133
End: 6016528
Strand: Reverse
Name: 158316782
Synonym: Franean1_5021
Alternate gene names: NA
Gene position: 6016528-6016133 (Counterclockwise)
Preceding gene: 158316784
Following gene: 158316781
Centisome position: 66.98
GC content: 75.25
Gene sequence:
>396_bases ATGACGCCGGGAAGCATCGCCCCCGGGCCGGGGGAGCCCGCCGAGCGGCCGACGATCTCGCCCACCGCGAAGGTCCACCG GGGCCTGTTCGTCGCGCCGGTGGACGCGTGGGTCGCGGAGGGGGCCGACGGGTGGTGGCGGATCCCGCTGGTGGACATCC CGCGGCCTGCCGGCAGCGGCAGCAAGAACGACCCGGAGCGCCGCCGCGCCCTCACCAGGGTGCGCAACGCTTGGATGCGG GAGATCCGCCGCCGCGTCGAGGCCGGACAGCTCTCCGGCACCTACGTCTCCCTGACCCGGGTGGCCGAGGGGCAGGAGTG GTTCTACTGGGGCCCCGCCGCCCCCGGGGAAGAGGTCTCCGACGGCAAGGCCTCCGACGGGGATTCCCGGGAGTAG
Upstream 100 bases:
>100_bases GGCTCCCGCCGCCAGCGAGGCCGGGCGCTGATGCCGCCAGCTCCCGCGCGCATGTCGTGGACTACACACGCACTACGGCC AGAACCGAGGTGGGTCGGCG
Downstream 100 bases:
>100_bases CGCCATACTACTCGGTTTGGCGCGCTTCGCGGAGTGTAACGAGATAGGTCGCTAGCCTCGTTGTCCGTGAGAGTGTTCGG GTGGGCGGCAGACGCCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTPGSIAPGPGEPAERPTISPTAKVHRGLFVAPVDAWVAEGADGWWRIPLVDIPRPAGSGSKNDPERRRALTRVRNAWMR EIRRRVEAGQLSGTYVSLTRVAEGQEWFYWGPAAPGEEVSDGKASDGDSRE
Sequences:
>Translated_131_residues MTPGSIAPGPGEPAERPTISPTAKVHRGLFVAPVDAWVAEGADGWWRIPLVDIPRPAGSGSKNDPERRRALTRVRNAWMR EIRRRVEAGQLSGTYVSLTRVAEGQEWFYWGPAAPGEEVSDGKASDGDSRE >Mature_130_residues TPGSIAPGPGEPAERPTISPTAKVHRGLFVAPVDAWVAEGADGWWRIPLVDIPRPAGSGSKNDPERRRALTRVRNAWMRE IRRRVEAGQLSGTYVSLTRVAEGQEWFYWGPAAPGEEVSDGKASDGDSRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14291; Mature: 14160
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPGSIAPGPGEPAERPTISPTAKVHRGLFVAPVDAWVAEGADGWWRIPLVDIPRPAGSG CCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEHHHHHHCCCCCEEECCEEECCCCCCCC SKNDPERRRALTRVRNAWMREIRRRVEAGQLSGTYVSLTRVAEGQEWFYWGPAAPGEEVS CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCC DGKASDGDSRE CCCCCCCCCCC >Mature Secondary Structure TPGSIAPGPGEPAERPTISPTAKVHRGLFVAPVDAWVAEGADGWWRIPLVDIPRPAGSG CCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEHHHHHHCCCCCEEECCEEECCCCCCCC SKNDPERRRALTRVRNAWMREIRRRVEAGQLSGTYVSLTRVAEGQEWFYWGPAAPGEEVS CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCC DGKASDGDSRE CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA