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The map label for this gene is iap [H]

Identifier: 158316766

GI number: 158316766

Start: 6001097

End: 6002140

Strand: Reverse

Name: iap [H]

Synonym: Franean1_5004

Alternate gene names: 158316766

Gene position: 6002140-6001097 (Counterclockwise)

Preceding gene: 158316767

Following gene: 158316765

Centisome position: 66.82

GC content: 72.41

Gene sequence:

>1044_bases
TTGCCCCGTCGTGGAATTGCCTGGCTGCCCGAGGACTGGGAGCAGTTCGTCAAGGGGCGCCAGCGCCCCTCGAACGCCCG
ATCGGGTACGGGCGCCCGGCGGCGCACCTCCCAGCCGCCTCGTCGGGCGGCGACGATCGCCGCGTTCACCACGGGCACGC
TCGCGGCCTCGACGGCGGCCTTCGCCGCCACGGTGCCGGCCACCCCGGACGGCACCGCGTCCATCGACCCGGGCGCGACC
CAGACGGCCTCCGTGCTGCCGGGCCAGGGCGGGACGGACGCGCCGGACGCCGCGGCCGCCGCCGCGCCGCTGGCGGGGGC
GATCGCGTCCTCCGAGCCGATGTTCACCAAGGTCTCGCTGACGGCGGACAACACCACGGTCGCGCCGAACGCCCCGGTGG
TGCTGACCGTCCGGGCCAATGAGGCTGGCGGCGCTCCGCTGGCCAACCAGCGGGTCCGCATCGTCGTGGTGAACGGGCCG
AAGTGGCAGACCTCGACGGCGCTGACGACCGACACCAACGGTCAGGCCCAGATCACCGCGCGGCTGCTGACCACCACGAC
GATCACCGCCGTCTTCGACGGCACGAGCGCGCTGCGGCCCTCGCTGGCCGGCGCGGCCACGATCACGATCAAGGCGCCGA
CGGCGCCCCGCCCGGCCGTCAGCCAGGCCATCCCGTCGGTGATCCCGGGCAGCTCGATCGGGGAGAAGGCCGTCTACCTG
GCCTCGCTACAGAAGGGCAAGCCGTACGTGTGGGGGGCGGAGGGCCCCTACTCGTTCGACTGCTCCGGCCTGGTCCAGTA
CGTCTTCAAGCAGCTCGGACGTTCCCTGCCGCGCACCGCGCAGGGCCAGTACAACGTGTCGACCCACGTGCCGCAGTCCG
GTAAGCGCCCCGGCGACCTGATCTTCTACGGGACCGAGGGCAACATCTACCACGTGGGCATCTACGCCGGGAACGGCTAC
ATGTGGGCCGCGCCGCAGACCGGCGGTGTGGTGTCGCTCCGCCCGATCTACAGCTCCACCTACAAGGTCGGCCGGATCAT
GTGA

Upstream 100 bases:

>100_bases
GGCCGATCCGGTCCCGCCGGCCGTGCTGGCCGGCGGGTCGGTGTGCGATGCCGAGCGCGGCAGAGCGCCTCACAGGCGCC
GGTAGAGAGAAGGACACGCG

Downstream 100 bases:

>100_bases
CACGCGGGGCGGCGCGGGCCCGAACCGGGCCGAGTGCCGCCCGCGCTCCGCGCTCCCGCACCTGGCCGCGCGCCGTCCCG
CGCCACGCCGGGCCCGGACG

Product: NLP/P60 protein

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MPRRGIAWLPEDWEQFVKGRQRPSNARSGTGARRRTSQPPRRAATIAAFTTGTLAASTAAFAATVPATPDGTASIDPGAT
QTASVLPGQGGTDAPDAAAAAAPLAGAIASSEPMFTKVSLTADNTTVAPNAPVVLTVRANEAGGAPLANQRVRIVVVNGP
KWQTSTALTTDTNGQAQITARLLTTTTITAVFDGTSALRPSLAGAATITIKAPTAPRPAVSQAIPSVIPGSSIGEKAVYL
ASLQKGKPYVWGAEGPYSFDCSGLVQYVFKQLGRSLPRTAQGQYNVSTHVPQSGKRPGDLIFYGTEGNIYHVGIYAGNGY
MWAAPQTGGVVSLRPIYSSTYKVGRIM

Sequences:

>Translated_347_residues
MPRRGIAWLPEDWEQFVKGRQRPSNARSGTGARRRTSQPPRRAATIAAFTTGTLAASTAAFAATVPATPDGTASIDPGAT
QTASVLPGQGGTDAPDAAAAAAPLAGAIASSEPMFTKVSLTADNTTVAPNAPVVLTVRANEAGGAPLANQRVRIVVVNGP
KWQTSTALTTDTNGQAQITARLLTTTTITAVFDGTSALRPSLAGAATITIKAPTAPRPAVSQAIPSVIPGSSIGEKAVYL
ASLQKGKPYVWGAEGPYSFDCSGLVQYVFKQLGRSLPRTAQGQYNVSTHVPQSGKRPGDLIFYGTEGNIYHVGIYAGNGY
MWAAPQTGGVVSLRPIYSSTYKVGRIM
>Mature_346_residues
PRRGIAWLPEDWEQFVKGRQRPSNARSGTGARRRTSQPPRRAATIAAFTTGTLAASTAAFAATVPATPDGTASIDPGATQ
TASVLPGQGGTDAPDAAAAAAPLAGAIASSEPMFTKVSLTADNTTVAPNAPVVLTVRANEAGGAPLANQRVRIVVVNGPK
WQTSTALTTDTNGQAQITARLLTTTTITAVFDGTSALRPSLAGAATITIKAPTAPRPAVSQAIPSVIPGSSIGEKAVYLA
SLQKGKPYVWGAEGPYSFDCSGLVQYVFKQLGRSLPRTAQGQYNVSTHVPQSGKRPGDLIFYGTEGNIYHVGIYAGNGYM
WAAPQTGGVVSLRPIYSSTYKVGRIM

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=115, Percent_Identity=41.7391304347826, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786421, Length=109, Percent_Identity=39.4495412844037, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 35911; Mature: 35780

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRGIAWLPEDWEQFVKGRQRPSNARSGTGARRRTSQPPRRAATIAAFTTGTLAASTAA
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCHHHHHHH
FAATVPATPDGTASIDPGATQTASVLPGQGGTDAPDAAAAAAPLAGAIASSEPMFTKVSL
EEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEE
TADNTTVAPNAPVVLTVRANEAGGAPLANQRVRIVVVNGPKWQTSTALTTDTNGQAQITA
ECCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEE
RLLTTTTITAVFDGTSALRPSLAGAATITIKAPTAPRPAVSQAIPSVIPGSSIGEKAVYL
EEEEEEEEEEEECCCHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEE
ASLQKGKPYVWGAEGPYSFDCSGLVQYVFKQLGRSLPRTAQGQYNVSTHVPQSGKRPGDL
EECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCE
IFYGTEGNIYHVGIYAGNGYMWAAPQTGGVVSLRPIYSSTYKVGRIM
EEECCCCCEEEEEEEECCCEEEECCCCCCEEEEECCCCCCEECCCCC
>Mature Secondary Structure 
PRRGIAWLPEDWEQFVKGRQRPSNARSGTGARRRTSQPPRRAATIAAFTTGTLAASTAA
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCHHHHHHH
FAATVPATPDGTASIDPGATQTASVLPGQGGTDAPDAAAAAAPLAGAIASSEPMFTKVSL
EEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEE
TADNTTVAPNAPVVLTVRANEAGGAPLANQRVRIVVVNGPKWQTSTALTTDTNGQAQITA
ECCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEE
RLLTTTTITAVFDGTSALRPSLAGAATITIKAPTAPRPAVSQAIPSVIPGSSIGEKAVYL
EEEEEEEEEEEECCCHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEE
ASLQKGKPYVWGAEGPYSFDCSGLVQYVFKQLGRSLPRTAQGQYNVSTHVPQSGKRPGDL
EECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCE
IFYGTEGNIYHVGIYAGNGYMWAAPQTGGVVSLRPIYSSTYKVGRIM
EEECCCCCEEEEEEEECCCEEEECCCCCCEEEEECCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1514809; 1459966 [H]