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The map label for this gene is tnpA [H]

Identifier: 158316539

GI number: 158316539

Start: 5700823

End: 5703339

Strand: Reverse

Name: tnpA [H]

Synonym: Franean1_4775

Alternate gene names: 158316539

Gene position: 5703339-5700823 (Counterclockwise)

Preceding gene: 158316542

Following gene: 158316538

Centisome position: 63.5

GC content: 70.8

Gene sequence:

>2517_bases
ATGGCGATCGAGTACCTCTCCGAGGAGCAGGTCCGCCGGTACGGGGGGTTCGCCCGGGATCCCTCACCGGGGGAGTTGGA
GCAGTCCCTGCGGATGGACCGCGCCACGCTGGCGCTGGTCGCGTCGAAGCGGCGGGAGGCCAACCGGCTGGGCTGGTCGG
TGCAGTGGGCGACGGTGCGGATGGTGGGGACGTTCCTGACGGATCCTGCTGAGGTGCCCGCGGTGGTCGCGGCGTTCATG
GCCGAGCAGGTCGGGGTGGTGGACCCGGGCTGTCTGAAGGGCTACTCGACGTTGGAGGAGATGCGCACGACAGTGACCGC
GGTGTCCGGGCGGGGCCTGGTCGGGGCGTTGGACCGGGTGTCGTCGGTGTGGGCGGTGGGGACCGGCGGGGTGGAGGTGG
CGGCGGTGCCGCCGGTGAAACTCGCCGAGCTCGCCGCCTACGGGATGGTCACGAAGGCCACGACGATCCGGGGCCTGCAC
GATGATCGGAAGGTCGCGACCGTGCTGGCCACGGTGCGTCATCTGGAAGCCGTCTCGGTCGACGACGCGCTGCTGCTGTT
CGACATCCTGATGGCGACGAAGCTGCTGGCCCGCGCCGAACGGGTCAGCGGCACCAAGCGGCTCAAGACGCTGCCCCGCT
TCCGTCAGGCCGCCGGACGGGTCGCGGCCGCAATCACTGTGCTGCTCGACGTGCCGCAGGCTCGGGACGGGCAGGTGATG
ACCGTGGCGGAGATGTGGACCGCGATCGAGCAGGTCGTGCCGCGGGAGAAGTTGCAGGCGGCGCTGGTGACGGTGGCGGA
GTATCTGCCCGACGAGGCCGAGGACGACGACGCGGACTGGCGCACCGAGCTGGTCACCCGCTACGCCACGGTGACGGGGT
TCCTGGAGCTGCTGGCCGAGACGATCGCCTGGGGTGCGACGCCGGCCGGCGCACCGATCGTGGCGGCGCTGCGGGACCTT
CCGCGGGTCAAGGCACGGCGCGCCCCGGAGGCGGCGCACATCGGGGAGCACGCCGGGCTGGTGACCGGCTCGTGGCGGCG
GCTGGTGTACGCCAACCCGCAGCTGTCCGCACCGCTGATCGACAAGCATGCCTACGTGTTCTGCGTGCTCGAACATCTGC
ACCGGGCGCTGCGCCGCAAGGACGTCTACGCCCTGGGCGCGGACCGCTGGGGTGATCCCCGCGCCCGTCTCCTCGACGGC
GACGCCTGGGAGCAGGCCCGCCCCCGGGGGCTGTCCGCTCTCGGACTGCCGGAGCAGCCCACCGACCATCTCGCCGAACT
CGTCTGTGACCTCGACGCCGCCTACCGCCAGGTCTCCGCCGGCCTGCCGACGAACAGCGCCGTGCAGATCGAGGGCGGGC
GGATCCGCCTGGACCGGCTTGCCGCCGCCCCCGACCCTGCCGGGATGGAGGCGGCCCGCGACGCCGTGGCCGCGCTGCTG
CCCCGTGTCGACTACGCGGAGCTTCTGCTGGAGGTCTTCGAGCGCACCGGCCTACCGGGCGCGTTCACCCACATCTCCGG
TTCCGATGCCCGCCCCGCCGACTTCGATTGGGGTGGCGGTCTGGTCGCCGGCGCCGACCGGATGCGGTTCGTCGTCCCGG
TCCGGTCGATCGCCGCCCGGCCCAGCGCGAAGTACTTCGCCGGCTCGAAACGCCGCGCCGGCGCGACCTGGCTCAACGTT
GTCTCCGACAAGGTGATGGGCCTCGGGGGCCTGGTCGTGCCCGGCACCCCGCGCGACAGCCTGCACATCCTCGATGCCCT
GCACAACCTCGACGTCGACGAACCCCCGGAGATCATCACCACCGATACCGGGTCGTATTCGGATCTTGTTTTCGGCCTGT
TCGCGATCAGCGGCTACCAGTTCTCCCCGCGGATCGCCGACCTCGCCGACACCCGACTGTGGCGCACCCGCACCGACGCC
GACTACGGGCCGCTCAACACGGTGTCCGGGCACACGGTCAACCTGGCCCGGATCGTCGAGCACTGGCAGGACATGCTCCG
CGTCGCCGGCTCCCTGATCACCGGGGAGGTCCGCGCCCACGACATGATCCGCATGCTCACCCGCGAGGGCAACCCGACCG
GGCTCGGCAACGCCTTCGTCGCCTACGGCCGGCTGTTCAAGACCCTCCACGTGCTCCAGGTCCTGCACGACGAGTCCTAC
CGGCGGATGATCAGCGCTCAGCAGAACATCACCGAAGGCCGACACAGCCTCGCCCGGCGGATCTTCTTCGGGAACCGCGG
CGAGCTCCGCCAGCGGTACCAGACCGGCATGGAAGACCAGATCGGCGTGCTCGGACTCGCCCTGAACTGCGTGGTCCTGT
GGAACACCTGGTACATCGACGCCGCCGTCACAGCCCTCGAAGCCGGCGGGATGACCCTGTCCGCCGAGATCCGATCCCGG
CTGAGCCCCCTGGTCTTCGAGCACATCAACTTCCACGGCTCGTACCCGTTCGTCCGGCCCGGTCTGGCCGGAGACCTACG
CCCGCTACGGAACCCCACCGACACCGACGAGCAGTGA

Upstream 100 bases:

>100_bases
GCACGCGGAACGTAGATATGTGTGGTCTATCCGTGTCGCTGGTAACCAAGGCGAACTGTGCGCTTACTTAAATGGTGGCA
GATCGTTACGTTCGGTGGCT

Downstream 100 bases:

>100_bases
GCCACGATGACCAGGAGGTCTCGGCGAGGCGGGCCGGCCGCTGAGCCCCGGATCCGTCGGTGGTGGCACCGCCTTCTCAC
GGCCCGATACCGCCGATCGT

Product: transposase Tn3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 838; Mature: 837

Protein sequence:

>838_residues
MAIEYLSEEQVRRYGGFARDPSPGELEQSLRMDRATLALVASKRREANRLGWSVQWATVRMVGTFLTDPAEVPAVVAAFM
AEQVGVVDPGCLKGYSTLEEMRTTVTAVSGRGLVGALDRVSSVWAVGTGGVEVAAVPPVKLAELAAYGMVTKATTIRGLH
DDRKVATVLATVRHLEAVSVDDALLLFDILMATKLLARAERVSGTKRLKTLPRFRQAAGRVAAAITVLLDVPQARDGQVM
TVAEMWTAIEQVVPREKLQAALVTVAEYLPDEAEDDDADWRTELVTRYATVTGFLELLAETIAWGATPAGAPIVAALRDL
PRVKARRAPEAAHIGEHAGLVTGSWRRLVYANPQLSAPLIDKHAYVFCVLEHLHRALRRKDVYALGADRWGDPRARLLDG
DAWEQARPRGLSALGLPEQPTDHLAELVCDLDAAYRQVSAGLPTNSAVQIEGGRIRLDRLAAAPDPAGMEAARDAVAALL
PRVDYAELLLEVFERTGLPGAFTHISGSDARPADFDWGGGLVAGADRMRFVVPVRSIAARPSAKYFAGSKRRAGATWLNV
VSDKVMGLGGLVVPGTPRDSLHILDALHNLDVDEPPEIITTDTGSYSDLVFGLFAISGYQFSPRIADLADTRLWRTRTDA
DYGPLNTVSGHTVNLARIVEHWQDMLRVAGSLITGEVRAHDMIRMLTREGNPTGLGNAFVAYGRLFKTLHVLQVLHDESY
RRMISAQQNITEGRHSLARRIFFGNRGELRQRYQTGMEDQIGVLGLALNCVVLWNTWYIDAAVTALEAGGMTLSAEIRSR
LSPLVFEHINFHGSYPFVRPGLAGDLRPLRNPTDTDEQ

Sequences:

>Translated_838_residues
MAIEYLSEEQVRRYGGFARDPSPGELEQSLRMDRATLALVASKRREANRLGWSVQWATVRMVGTFLTDPAEVPAVVAAFM
AEQVGVVDPGCLKGYSTLEEMRTTVTAVSGRGLVGALDRVSSVWAVGTGGVEVAAVPPVKLAELAAYGMVTKATTIRGLH
DDRKVATVLATVRHLEAVSVDDALLLFDILMATKLLARAERVSGTKRLKTLPRFRQAAGRVAAAITVLLDVPQARDGQVM
TVAEMWTAIEQVVPREKLQAALVTVAEYLPDEAEDDDADWRTELVTRYATVTGFLELLAETIAWGATPAGAPIVAALRDL
PRVKARRAPEAAHIGEHAGLVTGSWRRLVYANPQLSAPLIDKHAYVFCVLEHLHRALRRKDVYALGADRWGDPRARLLDG
DAWEQARPRGLSALGLPEQPTDHLAELVCDLDAAYRQVSAGLPTNSAVQIEGGRIRLDRLAAAPDPAGMEAARDAVAALL
PRVDYAELLLEVFERTGLPGAFTHISGSDARPADFDWGGGLVAGADRMRFVVPVRSIAARPSAKYFAGSKRRAGATWLNV
VSDKVMGLGGLVVPGTPRDSLHILDALHNLDVDEPPEIITTDTGSYSDLVFGLFAISGYQFSPRIADLADTRLWRTRTDA
DYGPLNTVSGHTVNLARIVEHWQDMLRVAGSLITGEVRAHDMIRMLTREGNPTGLGNAFVAYGRLFKTLHVLQVLHDESY
RRMISAQQNITEGRHSLARRIFFGNRGELRQRYQTGMEDQIGVLGLALNCVVLWNTWYIDAAVTALEAGGMTLSAEIRSR
LSPLVFEHINFHGSYPFVRPGLAGDLRPLRNPTDTDEQ
>Mature_837_residues
AIEYLSEEQVRRYGGFARDPSPGELEQSLRMDRATLALVASKRREANRLGWSVQWATVRMVGTFLTDPAEVPAVVAAFMA
EQVGVVDPGCLKGYSTLEEMRTTVTAVSGRGLVGALDRVSSVWAVGTGGVEVAAVPPVKLAELAAYGMVTKATTIRGLHD
DRKVATVLATVRHLEAVSVDDALLLFDILMATKLLARAERVSGTKRLKTLPRFRQAAGRVAAAITVLLDVPQARDGQVMT
VAEMWTAIEQVVPREKLQAALVTVAEYLPDEAEDDDADWRTELVTRYATVTGFLELLAETIAWGATPAGAPIVAALRDLP
RVKARRAPEAAHIGEHAGLVTGSWRRLVYANPQLSAPLIDKHAYVFCVLEHLHRALRRKDVYALGADRWGDPRARLLDGD
AWEQARPRGLSALGLPEQPTDHLAELVCDLDAAYRQVSAGLPTNSAVQIEGGRIRLDRLAAAPDPAGMEAARDAVAALLP
RVDYAELLLEVFERTGLPGAFTHISGSDARPADFDWGGGLVAGADRMRFVVPVRSIAARPSAKYFAGSKRRAGATWLNVV
SDKVMGLGGLVVPGTPRDSLHILDALHNLDVDEPPEIITTDTGSYSDLVFGLFAISGYQFSPRIADLADTRLWRTRTDAD
YGPLNTVSGHTVNLARIVEHWQDMLRVAGSLITGEVRAHDMIRMLTREGNPTGLGNAFVAYGRLFKTLHVLQVLHDESYR
RMISAQQNITEGRHSLARRIFFGNRGELRQRYQTGMEDQIGVLGLALNCVVLWNTWYIDAAVTALEAGGMTLSAEIRSRL
SPLVFEHINFHGSYPFVRPGLAGDLRPLRNPTDTDEQ

Specific function: Required for transposition of transposon Tn3 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 91424; Mature: 91292

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIEYLSEEQVRRYGGFARDPSPGELEQSLRMDRATLALVASKRREANRLGWSVQWATVR
CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHH
MVGTFLTDPAEVPAVVAAFMAEQVGVVDPGCLKGYSTLEEMRTTVTAVSGRGLVGALDRV
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SSVWAVGTGGVEVAAVPPVKLAELAAYGMVTKATTIRGLHDDRKVATVLATVRHLEAVSV
HHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
DDALLLFDILMATKLLARAERVSGTKRLKTLPRFRQAAGRVAAAITVLLDVPQARDGQVM
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
TVAEMWTAIEQVVPREKLQAALVTVAEYLPDEAEDDDADWRTELVTRYATVTGFLELLAE
EHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TIAWGATPAGAPIVAALRDLPRVKARRAPEAAHIGEHAGLVTGSWRRLVYANPQLSAPLI
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEECCCCEEEEECCCCCCCHH
DKHAYVFCVLEHLHRALRRKDVYALGADRWGDPRARLLDGDAWEQARPRGLSALGLPEQP
HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCCC
TDHLAELVCDLDAAYRQVSAGLPTNSAVQIEGGRIRLDRLAAAPDPAGMEAARDAVAALL
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEHHCCCCCCCCHHHHHHHHHHHH
PRVDYAELLLEVFERTGLPGAFTHISGSDARPADFDWGGGLVAGADRMRFVVPVRSIAAR
CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEEHHHHHCC
PSAKYFAGSKRRAGATWLNVVSDKVMGLGGLVVPGTPRDSLHILDALHNLDVDEPPEIIT
CCCHHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCEEE
TDTGSYSDLVFGLFAISGYQFSPRIADLADTRLWRTRTDADYGPLNTVSGHTVNLARIVE
ECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
HWQDMLRVAGSLITGEVRAHDMIRMLTREGNPTGLGNAFVAYGRLFKTLHVLQVLHDESY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RRMISAQQNITEGRHSLARRIFFGNRGELRQRYQTGMEDQIGVLGLALNCVVLWNTWYID
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHEEEEEEEHHHHH
AAVTALEAGGMTLSAEIRSRLSPLVFEHINFHGSYPFVRPGLAGDLRPLRNPTDTDEQ
HHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCC
>Mature Secondary Structure 
AIEYLSEEQVRRYGGFARDPSPGELEQSLRMDRATLALVASKRREANRLGWSVQWATVR
CCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHH
MVGTFLTDPAEVPAVVAAFMAEQVGVVDPGCLKGYSTLEEMRTTVTAVSGRGLVGALDRV
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SSVWAVGTGGVEVAAVPPVKLAELAAYGMVTKATTIRGLHDDRKVATVLATVRHLEAVSV
HHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
DDALLLFDILMATKLLARAERVSGTKRLKTLPRFRQAAGRVAAAITVLLDVPQARDGQVM
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
TVAEMWTAIEQVVPREKLQAALVTVAEYLPDEAEDDDADWRTELVTRYATVTGFLELLAE
EHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TIAWGATPAGAPIVAALRDLPRVKARRAPEAAHIGEHAGLVTGSWRRLVYANPQLSAPLI
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEECCCCEEEEECCCCCCCHH
DKHAYVFCVLEHLHRALRRKDVYALGADRWGDPRARLLDGDAWEQARPRGLSALGLPEQP
HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCCC
TDHLAELVCDLDAAYRQVSAGLPTNSAVQIEGGRIRLDRLAAAPDPAGMEAARDAVAALL
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEHHCCCCCCCCHHHHHHHHHHHH
PRVDYAELLLEVFERTGLPGAFTHISGSDARPADFDWGGGLVAGADRMRFVVPVRSIAAR
CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEEHHHHHCC
PSAKYFAGSKRRAGATWLNVVSDKVMGLGGLVVPGTPRDSLHILDALHNLDVDEPPEIIT
CCCHHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCEEE
TDTGSYSDLVFGLFAISGYQFSPRIADLADTRLWRTRTDADYGPLNTVSGHTVNLARIVE
ECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
HWQDMLRVAGSLITGEVRAHDMIRMLTREGNPTGLGNAFVAYGRLFKTLHVLQVLHDESY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RRMISAQQNITEGRHSLARRIFFGNRGELRQRYQTGMEDQIGVLGLALNCVVLWNTWYID
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHEEEEEEEHHHHH
AAVTALEAGGMTLSAEIRSRLSPLVFEHINFHGSYPFVRPGLAGDLRPLRNPTDTDEQ
HHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 391406 [H]