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The map label for this gene is ybdA [C]

Identifier: 158316538

GI number: 158316538

Start: 5699321

End: 5700652

Strand: Reverse

Name: ybdA [C]

Synonym: Franean1_4774

Alternate gene names: 158316538

Gene position: 5700652-5699321 (Counterclockwise)

Preceding gene: 158316539

Following gene: 158316537

Centisome position: 63.47

GC content: 69.14

Gene sequence:

>1332_bases
ATGGTGTTCAGAAGTGGGCGAATGCGACTGATGGTCGACATTCGCCCGTTGAGAGTCAGGCCGTATGCGCGGCTGTGGGG
GTCCACGGTCGTCACGGCGGTGGGCAGTGCGCTCACCGCGGTCGCAGTGCCGTTGCAGATCTACGAGATCACCGGGTCGT
CGACCTACGTCGGGCTGGCCGGGTTGGCTGGCCTCGGCCCGCTGGTGATCTGCGGGCTGTGGGGTGGCGCGGTCGCCGAC
GTCGTCGACCGGCGCCGGATGATGCTGGTCACCAACATCGGCATCGCGCTCACCTCGACCGTGCTGTGGGTCCAAGCGGT
CGTCGGACTGCATTCGGTTGCGGTCCTGCTGGGCCTCGTCGCGGTGCAGCAGGGCCTGTTCGGCGCGAACACGTCCGTGC
GGGGCGCGGTCGTTCCCCGACTGGTCCCGACCGAGCTTTTTCCGGCCGCGAACACGCTGCAGTCATCCGTCGTCTATTTC
GGCGGGATCGTCGGGCCGCTGCTCGCGGGCGCGCTGCTACCCGTGATCGGGATCGGGACGCTCTACCTCATCGACGCCAC
AGCACTGTGCGCGACGCTGTGGGCGGTATGGAAACTGCCACCGCTGCCACCGCTGCATGAGGGGACGCGCCGCGCCGGCC
TACGGGAGATCGCGGCGGGCCTGAGATACCTGACGAAGCGCAGGATCCTGCTGGTCACCTACCTCGCGGACCTCATCGCC
ATGCTGTTCGCCAACCCCGTGGCGCTGTTCCCGCAGGTAGCCCACGAGACCTTCGATGATCCACCCGGTGGGGGGTTCGC
CATCGGCGTTCTCTACGCCGCCATCCCCGCCGGCGCGCTGTGCGCCGCCGTGCTGTCCGGGACCTTCACCGGCATCCGCC
GCCACGGCGCGGTGGTAGCCGCGGCGGTATGCACATGGGGGCTGGCGATCACAGCGTTCGGGTTCTCCCGCAGCCTGATC
CTGGCCGCACTGTTCCTTGTACTCGCGGGCGCCGCCGTCATCGTGCTGAGCGTGTTCCGCAGAACCGTCCTACAGGAAGC
GGTCACCGACGAGATGCGTGGGCGGATGCAGGGCATCGACGTCATCGTCGCCGCCGGCGGCCCGCAGCTGGCCTACATCG
CCCACGGCACGGCCGGCGCCGCACTCGGCACCACCTGGGCTATCAGCGGCGGCGGCCTCCTTGCCGTTGCGGCGATGCTC
GCCACCGTCCTGGCCTTCCCCACCTACTGGCGCTACCGAGCCCCCACCCAGCCCGACCATCGCATCGGCGAACCCGCCGA
GCCTGAGCCCCCAGCTGTGAGATCACGCGAAGCCATCCAGACATCCCCATAG

Upstream 100 bases:

>100_bases
GCCTTCTCACGGCCCGATACCGCCGATCGTCCACGGTGCGGGCGCCACCGCGAGCAGGTCCCGGGCAGGGCTGCAGACCC
CCTGGCGGCGAAGATGACGG

Downstream 100 bases:

>100_bases
GCCCGCCGCCTGTTGTTCGTTAGGGGAACCCCCAACGAACACCCGACAAGGTCGCCGGCGCCCAGCCCCGAGCAGGCAAG
GCTGCGTCTCATAAGACCCG

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Membrane Transporter; Facilitator Superfamily Transporter; DrugProton Antiporter; Enterobactin Exporter EntS; Siderophore Export Protein; Facilitator Superfamily Permease; Mfs Transporter; Permease Of Facilitator Superfamily; Facilitator Superfamily Multidrug Resistance Protein; Facilitator MFS1 Protein; MFS Permease; Macrolide-Efflux Protein; Integral Membrane Protein; Facilitator Superfamily Transporter Permease; Permease MDR ; Facilitator Superfamily; Transporter Facilitator Family; Transmembrane Protein; Permease Facilitator Superfamily; Integral Membrane Transporter; MFS Transporter; Siderophore Exporter; Facilitator Family Transporter; Drug Resistance Efflux Protein; Facilitator Superfamily Transporter Transporter; Permeases Of Facilitator Superfamily

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MVFRSGRMRLMVDIRPLRVRPYARLWGSTVVTAVGSALTAVAVPLQIYEITGSSTYVGLAGLAGLGPLVICGLWGGAVAD
VVDRRRMMLVTNIGIALTSTVLWVQAVVGLHSVAVLLGLVAVQQGLFGANTSVRGAVVPRLVPTELFPAANTLQSSVVYF
GGIVGPLLAGALLPVIGIGTLYLIDATALCATLWAVWKLPPLPPLHEGTRRAGLREIAAGLRYLTKRRILLVTYLADLIA
MLFANPVALFPQVAHETFDDPPGGGFAIGVLYAAIPAGALCAAVLSGTFTGIRRHGAVVAAAVCTWGLAITAFGFSRSLI
LAALFLVLAGAAVIVLSVFRRTVLQEAVTDEMRGRMQGIDVIVAAGGPQLAYIAHGTAGAALGTTWAISGGGLLAVAAML
ATVLAFPTYWRYRAPTQPDHRIGEPAEPEPPAVRSREAIQTSP

Sequences:

>Translated_443_residues
MVFRSGRMRLMVDIRPLRVRPYARLWGSTVVTAVGSALTAVAVPLQIYEITGSSTYVGLAGLAGLGPLVICGLWGGAVAD
VVDRRRMMLVTNIGIALTSTVLWVQAVVGLHSVAVLLGLVAVQQGLFGANTSVRGAVVPRLVPTELFPAANTLQSSVVYF
GGIVGPLLAGALLPVIGIGTLYLIDATALCATLWAVWKLPPLPPLHEGTRRAGLREIAAGLRYLTKRRILLVTYLADLIA
MLFANPVALFPQVAHETFDDPPGGGFAIGVLYAAIPAGALCAAVLSGTFTGIRRHGAVVAAAVCTWGLAITAFGFSRSLI
LAALFLVLAGAAVIVLSVFRRTVLQEAVTDEMRGRMQGIDVIVAAGGPQLAYIAHGTAGAALGTTWAISGGGLLAVAAML
ATVLAFPTYWRYRAPTQPDHRIGEPAEPEPPAVRSREAIQTSP
>Mature_443_residues
MVFRSGRMRLMVDIRPLRVRPYARLWGSTVVTAVGSALTAVAVPLQIYEITGSSTYVGLAGLAGLGPLVICGLWGGAVAD
VVDRRRMMLVTNIGIALTSTVLWVQAVVGLHSVAVLLGLVAVQQGLFGANTSVRGAVVPRLVPTELFPAANTLQSSVVYF
GGIVGPLLAGALLPVIGIGTLYLIDATALCATLWAVWKLPPLPPLHEGTRRAGLREIAAGLRYLTKRRILLVTYLADLIA
MLFANPVALFPQVAHETFDDPPGGGFAIGVLYAAIPAGALCAAVLSGTFTGIRRHGAVVAAAVCTWGLAITAFGFSRSLI
LAALFLVLAGAAVIVLSVFRRTVLQEAVTDEMRGRMQGIDVIVAAGGPQLAYIAHGTAGAALGTTWAISGGGLLAVAAML
ATVLAFPTYWRYRAPTQPDHRIGEPAEPEPPAVRSREAIQTSP

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786806, Length=356, Percent_Identity=26.123595505618, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46245; Mature: 46245

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFRSGRMRLMVDIRPLRVRPYARLWGSTVVTAVGSALTAVAVPLQIYEITGSSTYVGLA
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEHHH
GLAGLGPLVICGLWGGAVADVVDRRRMMLVTNIGIALTSTVLWVQAVVGLHSVAVLLGLV
HHHHHHHHHHHHHCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVQQGLFGANTSVRGAVVPRLVPTELFPAANTLQSSVVYFGGIVGPLLAGALLPVIGIGT
HHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYLIDATALCATLWAVWKLPPLPPLHEGTRRAGLREIAAGLRYLTKRRILLVTYLADLIA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLFANPVALFPQVAHETFDDPPGGGFAIGVLYAAIPAGALCAAVLSGTFTGIRRHGAVVA
HHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVCTWGLAITAFGFSRSLILAALFLVLAGAAVIVLSVFRRTVLQEAVTDEMRGRMQGID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VIVAAGGPQLAYIAHGTAGAALGTTWAISGGGLLAVAAMLATVLAFPTYWRYRAPTQPDH
EEEECCCCEEEEEECCCCCCHHCCEEEECCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCC
RIGEPAEPEPPAVRSREAIQTSP
CCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MVFRSGRMRLMVDIRPLRVRPYARLWGSTVVTAVGSALTAVAVPLQIYEITGSSTYVGLA
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEHHH
GLAGLGPLVICGLWGGAVADVVDRRRMMLVTNIGIALTSTVLWVQAVVGLHSVAVLLGLV
HHHHHHHHHHHHHCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVQQGLFGANTSVRGAVVPRLVPTELFPAANTLQSSVVYFGGIVGPLLAGALLPVIGIGT
HHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYLIDATALCATLWAVWKLPPLPPLHEGTRRAGLREIAAGLRYLTKRRILLVTYLADLIA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLFANPVALFPQVAHETFDDPPGGGFAIGVLYAAIPAGALCAAVLSGTFTGIRRHGAVVA
HHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVCTWGLAITAFGFSRSLILAALFLVLAGAAVIVLSVFRRTVLQEAVTDEMRGRMQGID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VIVAAGGPQLAYIAHGTAGAALGTTWAISGGGLLAVAAMLATVLAFPTYWRYRAPTQPDH
EEEECCCCEEEEEECCCCCCHHCCEEEECCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCC
RIGEPAEPEPPAVRSREAIQTSP
CCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA