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The map label for this gene is frc [H]

Identifier: 158316495

GI number: 158316495

Start: 5646100

End: 5647314

Strand: Reverse

Name: frc [H]

Synonym: Franean1_4730

Alternate gene names: 158316495

Gene position: 5647314-5646100 (Counterclockwise)

Preceding gene: 158316496

Following gene: 158316494

Centisome position: 62.87

GC content: 72.1

Gene sequence:

>1215_bases
ATGACCGGTGTCATGGAGGGCGTCCGCATCCTCGAGGTCGCCGAGCACACCTTCGTGCCGGCGGCGTCGGCCCTGCTGGC
CGACTGGGGCGCGGAGGTCATCAAGATCGAGCACGTCGAGCGCGGCGACGCCATGCGCGGGCTCGCCTCGGCCGGGGTGG
CTGCGGTGCCGGCGGACGTCCACGTGCTGCTGGAGCACTCCAACCGCGGGAAGCGCAGCCTGGGCCTCGACCTGACCTCC
GCCGAGGGTCGCGATCTGCTCTACCGGCTGGCCGCGACGTCCGACGTGTTCCTCACCAACAAGCTGCCGAAGGTGCGGGC
GAAGCTGCAGATCGACGTGGAGTCGATCCGCGAGCACAACCCGCGCATCATCTACGTGCGCGGCACCGGCCAGGGCGAGC
GTGGCCCCGACGCCGACCGGGGGTCCTACGACTCGCTCGCGTTCTGGGCCCGCGCCGGGATCGCGTCGGGCCTGACCCGT
CCGGAGTACGGCCATGTGCCGAGCCCGCCGGCTCCGGGCTTCGGGGACTCGATCGGCGCGATGACGATCGCCGGCGGCAT
CATGGGCGCTCTGTTCCACCGGGAGCGGACCGGTGTCGCCAGCATCGTGGACGTGTCCCTGCTCGGCACCGGCCTGTGGG
CCATGGGCCAGGCACTCGGGCTCTCGCTGGTGCTGAACATGCCGTGGGAGCCGCTGCCGCTGAACGCGATGGCCAACCCG
CTCGTCGGCAACTACCTCACCAAGGACGGGCGCTGGCTGGCGTTCTCCTGCCTGCAGGCGGGCAGGTACTGGCCGCCGAT
GTGCGAGGGGATCGGGCGCCCGGAGCTGGCGGTCGACCCCCGGTTCGCCGACCACGCGGCGCTGCGGGACAACAGCACCG
AGGCGATCGCCCTGCTGCGTGAGGCCTTCGCGGAGCGCACGCTCGAGGAGTGGCGGTCGCGGCTGGCCGGCTTCGTCGGC
CAGTGGGCGGTCGTGCAGGACACGCAGGAGGTCGCGGTCGACCCCCAGTCCGTCGCGAACGGCTACATCCAGGACCTCGA
GACGGCGGCCGGCGTGCCGTTCCAGCTGGCCGCAGCGCCGGTGCAGTTCGACGAGAGGCCATCGGCCACCCGCCGGGCAC
CGCAGTTCAACGAGCACGGTGACGAGATCCTCGCGGAGCTCGGGCTCGACTGGGACACGGTCGTGGACCTCAAGGTCCGC
GGCGTCGTCGCGTAG

Upstream 100 bases:

>100_bases
ACGTGACGCGGATGTCGCGCGCGGAATGGCGCCGGCGCAACGAGGCCGCCGGAGTGGGCCGGGTGGAGGCCGACGGGCTC
CAGGACGTGGGCGGGCCTCG

Downstream 100 bases:

>100_bases
CGACCACCCGGGCCGTCCGCGCACCGACCATCCGACTGAGTAACTAGGAGAGACTGACATGACCTTGTTCGACGCCTTCC
GGTACGACGGGAAGCGGGTC

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MTGVMEGVRILEVAEHTFVPAASALLADWGAEVIKIEHVERGDAMRGLASAGVAAVPADVHVLLEHSNRGKRSLGLDLTS
AEGRDLLYRLAATSDVFLTNKLPKVRAKLQIDVESIREHNPRIIYVRGTGQGERGPDADRGSYDSLAFWARAGIASGLTR
PEYGHVPSPPAPGFGDSIGAMTIAGGIMGALFHRERTGVASIVDVSLLGTGLWAMGQALGLSLVLNMPWEPLPLNAMANP
LVGNYLTKDGRWLAFSCLQAGRYWPPMCEGIGRPELAVDPRFADHAALRDNSTEAIALLREAFAERTLEEWRSRLAGFVG
QWAVVQDTQEVAVDPQSVANGYIQDLETAAGVPFQLAAAPVQFDERPSATRRAPQFNEHGDEILAELGLDWDTVVDLKVR
GVVA

Sequences:

>Translated_404_residues
MTGVMEGVRILEVAEHTFVPAASALLADWGAEVIKIEHVERGDAMRGLASAGVAAVPADVHVLLEHSNRGKRSLGLDLTS
AEGRDLLYRLAATSDVFLTNKLPKVRAKLQIDVESIREHNPRIIYVRGTGQGERGPDADRGSYDSLAFWARAGIASGLTR
PEYGHVPSPPAPGFGDSIGAMTIAGGIMGALFHRERTGVASIVDVSLLGTGLWAMGQALGLSLVLNMPWEPLPLNAMANP
LVGNYLTKDGRWLAFSCLQAGRYWPPMCEGIGRPELAVDPRFADHAALRDNSTEAIALLREAFAERTLEEWRSRLAGFVG
QWAVVQDTQEVAVDPQSVANGYIQDLETAAGVPFQLAAAPVQFDERPSATRRAPQFNEHGDEILAELGLDWDTVVDLKVR
GVVA
>Mature_403_residues
TGVMEGVRILEVAEHTFVPAASALLADWGAEVIKIEHVERGDAMRGLASAGVAAVPADVHVLLEHSNRGKRSLGLDLTSA
EGRDLLYRLAATSDVFLTNKLPKVRAKLQIDVESIREHNPRIIYVRGTGQGERGPDADRGSYDSLAFWARAGIASGLTRP
EYGHVPSPPAPGFGDSIGAMTIAGGIMGALFHRERTGVASIVDVSLLGTGLWAMGQALGLSLVLNMPWEPLPLNAMANPL
VGNYLTKDGRWLAFSCLQAGRYWPPMCEGIGRPELAVDPRFADHAALRDNSTEAIALLREAFAERTLEEWRSRLAGFVGQ
WAVVQDTQEVAVDPQSVANGYIQDLETAAGVPFQLAAAPVQFDERPSATRRAPQFNEHGDEILAELGLDWDTVVDLKVRG
VVA

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=399, Percent_Identity=27.0676691729323, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI300863124, Length=360, Percent_Identity=27.7777777777778, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI42794625, Length=412, Percent_Identity=27.1844660194175, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI266456254, Length=412, Percent_Identity=27.1844660194175, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI300863126, Length=391, Percent_Identity=25.8312020460358, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI266458393, Length=278, Percent_Identity=29.4964028776978, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI266458397, Length=269, Percent_Identity=30.1115241635688, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI1788717, Length=423, Percent_Identity=24.5862884160757, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI87082093, Length=397, Percent_Identity=24.4332493702771, Blast_Score=94, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24648431, Length=405, Percent_Identity=28.641975308642, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24585488, Length=308, Percent_Identity=28.2467532467532, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 43524; Mature: 43393

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGVMEGVRILEVAEHTFVPAASALLADWGAEVIKIEHVERGDAMRGLASAGVAAVPADV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCEECCCCE
HVLLEHSNRGKRSLGLDLTSAEGRDLLYRLAATSDVFLTNKLPKVRAKLQIDVESIREHN
EEEEECCCCCCCCCCCEEECCCCHHHHHHHHCCCCEEEECCCCHHHEEEEEEHHHHHCCC
PRIIYVRGTGQGERGPDADRGSYDSLAFWARAGIASGLTRPEYGHVPSPPAPGFGDSIGA
CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
MTIAGGIMGALFHRERTGVASIVDVSLLGTGLWAMGQALGLSLVLNMPWEPLPLNAMANP
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHCCC
LVGNYLTKDGRWLAFSCLQAGRYWPPMCEGIGRPELAVDPRFADHAALRDNSTEAIALLR
HHHHHCCCCCCEEEHHHHHCCCCCCHHHHCCCCCCEEECCCCCCHHHHCCCCHHHHHHHH
EAFAERTLEEWRSRLAGFVGQWAVVQDTQEVAVDPQSVANGYIQDLETAAGVPFQLAAAP
HHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCC
VQFDERPSATRRAPQFNEHGDEILAELGLDWDTVVDLKVRGVVA
CCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEECC
>Mature Secondary Structure 
TGVMEGVRILEVAEHTFVPAASALLADWGAEVIKIEHVERGDAMRGLASAGVAAVPADV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCEECCCCE
HVLLEHSNRGKRSLGLDLTSAEGRDLLYRLAATSDVFLTNKLPKVRAKLQIDVESIREHN
EEEEECCCCCCCCCCCEEECCCCHHHHHHHHCCCCEEEECCCCHHHEEEEEEHHHHHCCC
PRIIYVRGTGQGERGPDADRGSYDSLAFWARAGIASGLTRPEYGHVPSPPAPGFGDSIGA
CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
MTIAGGIMGALFHRERTGVASIVDVSLLGTGLWAMGQALGLSLVLNMPWEPLPLNAMANP
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHCCC
LVGNYLTKDGRWLAFSCLQAGRYWPPMCEGIGRPELAVDPRFADHAALRDNSTEAIALLR
HHHHHCCCCCCEEEHHHHHCCCCCCHHHHCCCCCCEEECCCCCCHHHHCCCCHHHHHHHH
EAFAERTLEEWRSRLAGFVGQWAVVQDTQEVAVDPQSVANGYIQDLETAAGVPFQLAAAP
HHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCC
VQFDERPSATRRAPQFNEHGDEILAELGLDWDTVVDLKVRGVVA
CCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]