| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is tauD [H]
Identifier: 158316489
GI number: 158316489
Start: 5638886
End: 5639716
Strand: Reverse
Name: tauD [H]
Synonym: Franean1_4724
Alternate gene names: 158316489
Gene position: 5639716-5638886 (Counterclockwise)
Preceding gene: 158316490
Following gene: 158316488
Centisome position: 62.79
GC content: 62.58
Gene sequence:
>831_bases ATGGGTGTAGAAACTACGCCGGCGCAGAGACTCTCGACAGTCGGCAGTATCAGATTCGAGAAGGTGACGGGGAACATCGG TGCGATCGTCCACGGTGTCGACGTCCACGTTGCCCACGGCGACGAGGTGGCGTCGGTGCTGCTGCGATCGTTGCATGAAC ACGGCGTGCTGTTCTTCCATTCGGACACGGCGATCAGCAGCGAGCAGTTCTCGGGGTTTTCCTCGGTCTTTGGTGAGCAA TATGTCTATCCCTATGGGAAAGGGCCTGGCCAATTCGTAACCGAGGAGGGCGCCGACGCGGTGCGACTCCGGACGAGCTA CTGGCACACGGACGGGAGTCCTCAGGAGAAGCCCCCCCAAGCCGCGCTCTTATGTGCGGTGGAGGTCCCGGCCTTCGGTG GTGACACCATGTGGGCAAGCATGACCGCGGCATTCGACGCCCTATCGTCCCGATACCAGCGGCTGTTCGAAGGCATGGAG GCTGTGCACAGCACCGCCACGGTGGCACGGTACCACGACGCCTTCGGCCAGGGGGAAAGCCACGCGCATCCTGTCGTGAT CACCGATCCGGTGACTCGGCGGAAGGCTCTTTACGTCAACTCGGTTTACACGGAGCGGCTCGTCGGGATGAGCGAGCGGG AGAACGAGACGCTCCTGCGGATGCTGTACGAACACGTCAATACGCCGGAGTTCCACGTCCGTCTGCGTTGGCAGCCGAAC ATGATCGCAGTGTGGGAAGAGCGGGTTACGCAACATCGTGCGGTCGCCGACTACGCGGAACGTCGGGTCCTGCGCCGCAT CACCATCACTGGCGACCGTCCGAAGGCCTGA
Upstream 100 bases:
>100_bases CGCGCGAGCCGTATCCGCTCCGAGCCCCGGCGTCAGCAGAGTCCGCCTGGCGAACGGGTGCGCGTGTTCTGACATCGTCA GCTAAAGGAGGTCGGTATCC
Downstream 100 bases:
>100_bases CTGCGTTCAGAGCGCTTAGCCAGCGTCTGCGACGCCGACCCGTTTCGCGTGCCAGCCAGCCAGCGGTGCTGCCTGTGAGC CCGCCGAGGTATGGGAATTA
Product: taurine dioxygenase
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MGVETTPAQRLSTVGSIRFEKVTGNIGAIVHGVDVHVAHGDEVASVLLRSLHEHGVLFFHSDTAISSEQFSGFSSVFGEQ YVYPYGKGPGQFVTEEGADAVRLRTSYWHTDGSPQEKPPQAALLCAVEVPAFGGDTMWASMTAAFDALSSRYQRLFEGME AVHSTATVARYHDAFGQGESHAHPVVITDPVTRRKALYVNSVYTERLVGMSERENETLLRMLYEHVNTPEFHVRLRWQPN MIAVWEERVTQHRAVADYAERRVLRRITITGDRPKA
Sequences:
>Translated_276_residues MGVETTPAQRLSTVGSIRFEKVTGNIGAIVHGVDVHVAHGDEVASVLLRSLHEHGVLFFHSDTAISSEQFSGFSSVFGEQ YVYPYGKGPGQFVTEEGADAVRLRTSYWHTDGSPQEKPPQAALLCAVEVPAFGGDTMWASMTAAFDALSSRYQRLFEGME AVHSTATVARYHDAFGQGESHAHPVVITDPVTRRKALYVNSVYTERLVGMSERENETLLRMLYEHVNTPEFHVRLRWQPN MIAVWEERVTQHRAVADYAERRVLRRITITGDRPKA >Mature_275_residues GVETTPAQRLSTVGSIRFEKVTGNIGAIVHGVDVHVAHGDEVASVLLRSLHEHGVLFFHSDTAISSEQFSGFSSVFGEQY VYPYGKGPGQFVTEEGADAVRLRTSYWHTDGSPQEKPPQAALLCAVEVPAFGGDTMWASMTAAFDALSSRYQRLFEGMEA VHSTATVARYHDAFGQGESHAHPVVITDPVTRRKALYVNSVYTERLVGMSERENETLLRMLYEHVNTPEFHVRLRWQPNM IAVWEERVTQHRAVADYAERRVLRRITITGDRPKA
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=266, Percent_Identity=38.3458646616541, Blast_Score=182, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6322971, Length=287, Percent_Identity=28.2229965156794, Blast_Score=119, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 30829; Mature: 30698
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVETTPAQRLSTVGSIRFEKVTGNIGAIVHGVDVHVAHGDEVASVLLRSLHEHGVLFFH CCCCCCHHHHHHHHHCEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHCCEEEEE SDTAISSEQFSGFSSVFGEQYVYPYGKGPGQFVTEEGADAVRLRTSYWHTDGSPQEKPPQ CCCCCCHHHHCCHHHHHCCCEECCCCCCCCCEECCCCCCEEEEEEEEECCCCCCCCCCCC AALLCAVEVPAFGGDTMWASMTAAFDALSSRYQRLFEGMEAVHSTATVARYHDAFGQGES EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC HAHPVVITDPVTRRKALYVNSVYTERLVGMSERENETLLRMLYEHVNTPEFHVRLRWQPN CCCCEEEECCCCCHHEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCC MIAVWEERVTQHRAVADYAERRVLRRITITGDRPKA EEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC >Mature Secondary Structure GVETTPAQRLSTVGSIRFEKVTGNIGAIVHGVDVHVAHGDEVASVLLRSLHEHGVLFFH CCCCCHHHHHHHHHCEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHCCEEEEE SDTAISSEQFSGFSSVFGEQYVYPYGKGPGQFVTEEGADAVRLRTSYWHTDGSPQEKPPQ CCCCCCHHHHCCHHHHHCCCEECCCCCCCCCEECCCCCCEEEEEEEEECCCCCCCCCCCC AALLCAVEVPAFGGDTMWASMTAAFDALSSRYQRLFEGMEAVHSTATVARYHDAFGQGES EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC HAHPVVITDPVTRRKALYVNSVYTERLVGMSERENETLLRMLYEHVNTPEFHVRLRWQPN CCCCEEEECCCCCHHEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCC MIAVWEERVTQHRAVADYAERRVLRRITITGDRPKA EEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]