| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316466
Identifier: 158316466
GI number: 158316466
Start: 5616941
End: 5617372
Strand: Reverse
Name: 158316466
Synonym: Franean1_4701
Alternate gene names: NA
Gene position: 5617372-5616941 (Counterclockwise)
Preceding gene: 158316467
Following gene: 158316465
Centisome position: 62.54
GC content: 67.36
Gene sequence:
>432_bases ATGATCGATCCGAACCTCGACCACGTCGGCCTCGTGGTGCCGGAGCTCGAGCCGGCGATGGCGGCGCTGTCCGCCCAGCT CGGCCTGGAGTGGATGGGGATCTTCGAGCCCACGCTGGCGATGCGCGACGCCGAGCACGGCACCCGTGACGTCCAGCTCA AGATTGCCGTCACGACGCAGTACCCGCGCCTGGAGTTGATCCAGATGATTCCGGACTCGCCGTGGGCGCTTGCCGAGAGC CGCATGCTCCTGCACCACCTCGCCTACTACGCGGGCGACCTCGCGGCGGACAGCAGCCGGGTGGCCGGGCCGTGCCCGAT CGAGATCTATGGCGTCGGCGCGGACGGGAAGACCCCGAAGAGGTTCACCTACCATCTGCACAACGGGCTGCGGTTCGAAC TCCTGGATCAGCGTTCCGGTAGGGCAGAGTAA
Upstream 100 bases:
>100_bases CGAAGACCCAGCAGTACATCGCCGAGCTGACCCCAGGCCTCGACGACGACCGCAAGCACGCCATCCTCGCGGGGAACGCT GTGCGGGTGTTCAACCTCGC
Downstream 100 bases:
>100_bases GAGCGGTGACACAGCCGACGCCGACACAGAGTTCGCCTGCTCGCAGCAACGTGCAGGCACTCGTCGATACCATCCGCGGA CGGATCATCCGCGGCCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MIDPNLDHVGLVVPELEPAMAALSAQLGLEWMGIFEPTLAMRDAEHGTRDVQLKIAVTTQYPRLELIQMIPDSPWALAES RMLLHHLAYYAGDLAADSSRVAGPCPIEIYGVGADGKTPKRFTYHLHNGLRFELLDQRSGRAE
Sequences:
>Translated_143_residues MIDPNLDHVGLVVPELEPAMAALSAQLGLEWMGIFEPTLAMRDAEHGTRDVQLKIAVTTQYPRLELIQMIPDSPWALAES RMLLHHLAYYAGDLAADSSRVAGPCPIEIYGVGADGKTPKRFTYHLHNGLRFELLDQRSGRAE >Mature_143_residues MIDPNLDHVGLVVPELEPAMAALSAQLGLEWMGIFEPTLAMRDAEHGTRDVQLKIAVTTQYPRLELIQMIPDSPWALAES RMLLHHLAYYAGDLAADSSRVAGPCPIEIYGVGADGKTPKRFTYHLHNGLRFELLDQRSGRAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15848; Mature: 15848
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPNLDHVGLVVPELEPAMAALSAQLGLEWMGIFEPTLAMRDAEHGTRDVQLKIAVTTQ CCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCEEEEEEEEEECC YPRLELIQMIPDSPWALAESRMLLHHLAYYAGDLAADSSRVAGPCPIEIYGVGADGKTPK CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCC RFTYHLHNGLRFELLDQRSGRAE EEEEEECCCEEEEEECCCCCCCC >Mature Secondary Structure MIDPNLDHVGLVVPELEPAMAALSAQLGLEWMGIFEPTLAMRDAEHGTRDVQLKIAVTTQ CCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCEEEEEEEEEECC YPRLELIQMIPDSPWALAESRMLLHHLAYYAGDLAADSSRVAGPCPIEIYGVGADGKTPK CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCC RFTYHLHNGLRFELLDQRSGRAE EEEEEECCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA