| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cyp144 [H]
Identifier: 158316454
GI number: 158316454
Start: 5603347
End: 5604681
Strand: Reverse
Name: cyp144 [H]
Synonym: Franean1_4689
Alternate gene names: 158316454
Gene position: 5604681-5603347 (Counterclockwise)
Preceding gene: 158316455
Following gene: 158316453
Centisome position: 62.4
GC content: 68.39
Gene sequence:
>1335_bases GTGCGCGAATTCGAGGCAATGGACTTCTTCCGCGACGAGACTCTCGTCGCGGACCCGTACCCTTACCTCGACGCCCTGCG GCGGAAATGCCCCGTACAACGGGAACGCCACCACGACGTGGTGATGGTGACCGGCTACGAGGAGGCGGTGGAGGTCTTCC ACGACTCCGAGGCGTTCTCGTCCTGCGTCTCGGTGACAGGCCCGTTCCCCGGCTTCCCGGTCCCGCTCGACGGTGACGAC GTCTCCGCGCTGATCGAACGGCATCGCCATGAGCTGCCGATGAACGACCAGCTCCCGACGATGGACCCGCCCACCCACAC CGATCATCGCGCGCTGCTGATGCGGCTGATCACCCCTAAGCGCCTCAAGGAGAACGAGGCGCTGATGTGGGACCTTGCCG ACCGCATGCTCGACCCGTTCCTCACTCCTGGTGAGGGAGAGTTCATCAGCGGATTCGCCGGACCGTTCACACTGCTCGTC ATCGCGGACCTTCTGGGCGTCCCCGAGGAGGACCAGGACGAGTTTCTCGACAAACTGCAGCGCCAGCCGGCACAGACCGG CGGCGTCGGCGGCACCGGAGCGGAGACCCTGGCCCACAGCCCGCTGGAGTTTCTCTACGGGAAGTTCACCGGCTACATCG AGGACCGTCGCCGCAACCCCCGCGCCGACGTGCTGACCGGTCTGGCCGGCGCGACGTTCCCGGACGGATCGACACCCGAG GTTATCGACGTGGTGCGGGTGGCCGCGAACCTCTTCTCCGCCGGTCAGGAAACCACGGTGCGCCTGCTCAGCTCGGCGCT GAAGATCCTCGCCGAGCGGCCCGACCTCCAGCGGCAGCTTCGTGTCGAGCGGGAGCGCATCCCGGCCTTCATCGAGGAGA CCCTGCGCTGGGAGAGCCCGGTCAAGGGCGACTTCCGGCTCTCCCGTGTGCCGGTCACCGTGGGTGGGGTGCAGCTGCCC GCCGGCACCACGGTGATGGTGGTCAACGGGGCGGCCAACCGCGACCCACGCCGCTTCGAGAACCCGGAGACGTTCGACGT CGCCCGTTCCAACGCCCGCCAGCACCTGGCCTTCGGGCGTGGGATCCACAGCTGCCCCGGCGCGCCGTTGGCACGGGCCG AGGCACGGGCGAGTCTTGAACGGCTGTTGGACCGCACCACCGACATCCGCGTCAACGAGCGGGTGCACGGCCCGGCCGGC AACCGCCGCTACGAGTACATGCCCACCTTCATCCTGCGTGGGCTGACCGCCCTGCACCTGGAGTTCGACCTCGCGCCAGC ACCGCCACGTGACTTCCCGCCCGCCGGCTCACCTGTCGGATGGATCAAGGGCTGA
Upstream 100 bases:
>100_bases TCGGACACGCTTGTGCGGGGAAGTCAGATCTGCGGGCACGGTCGTCCACCAGACAGAACGACCACCGGCTCCGGCTCGTA TGAAGGGATCTGTAGAGACT
Downstream 100 bases:
>100_bases CGCTGCCTTCTGGCATGGTGTCGTACCCGGAGGGGCGCACGGTTCCCGCGGCCGAGACGTTCGTCCCCGGTGAACCCCTG TTGCCGCACGAGCCGACCGC
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MREFEAMDFFRDETLVADPYPYLDALRRKCPVQRERHHDVVMVTGYEEAVEVFHDSEAFSSCVSVTGPFPGFPVPLDGDD VSALIERHRHELPMNDQLPTMDPPTHTDHRALLMRLITPKRLKENEALMWDLADRMLDPFLTPGEGEFISGFAGPFTLLV IADLLGVPEEDQDEFLDKLQRQPAQTGGVGGTGAETLAHSPLEFLYGKFTGYIEDRRRNPRADVLTGLAGATFPDGSTPE VIDVVRVAANLFSAGQETTVRLLSSALKILAERPDLQRQLRVERERIPAFIEETLRWESPVKGDFRLSRVPVTVGGVQLP AGTTVMVVNGAANRDPRRFENPETFDVARSNARQHLAFGRGIHSCPGAPLARAEARASLERLLDRTTDIRVNERVHGPAG NRRYEYMPTFILRGLTALHLEFDLAPAPPRDFPPAGSPVGWIKG
Sequences:
>Translated_444_residues MREFEAMDFFRDETLVADPYPYLDALRRKCPVQRERHHDVVMVTGYEEAVEVFHDSEAFSSCVSVTGPFPGFPVPLDGDD VSALIERHRHELPMNDQLPTMDPPTHTDHRALLMRLITPKRLKENEALMWDLADRMLDPFLTPGEGEFISGFAGPFTLLV IADLLGVPEEDQDEFLDKLQRQPAQTGGVGGTGAETLAHSPLEFLYGKFTGYIEDRRRNPRADVLTGLAGATFPDGSTPE VIDVVRVAANLFSAGQETTVRLLSSALKILAERPDLQRQLRVERERIPAFIEETLRWESPVKGDFRLSRVPVTVGGVQLP AGTTVMVVNGAANRDPRRFENPETFDVARSNARQHLAFGRGIHSCPGAPLARAEARASLERLLDRTTDIRVNERVHGPAG NRRYEYMPTFILRGLTALHLEFDLAPAPPRDFPPAGSPVGWIKG >Mature_444_residues MREFEAMDFFRDETLVADPYPYLDALRRKCPVQRERHHDVVMVTGYEEAVEVFHDSEAFSSCVSVTGPFPGFPVPLDGDD VSALIERHRHELPMNDQLPTMDPPTHTDHRALLMRLITPKRLKENEALMWDLADRMLDPFLTPGEGEFISGFAGPFTLLV IADLLGVPEEDQDEFLDKLQRQPAQTGGVGGTGAETLAHSPLEFLYGKFTGYIEDRRRNPRADVLTGLAGATFPDGSTPE VIDVVRVAANLFSAGQETTVRLLSSALKILAERPDLQRQLRVERERIPAFIEETLRWESPVKGDFRLSRVPVTVGGVQLP AGTTVMVVNGAANRDPRRFENPETFDVARSNARQHLAFGRGIHSCPGAPLARAEARASLERLLDRTTDIRVNERVHGPAG NRRYEYMPTFILRGLTALHLEFDLAPAPPRDFPPAGSPVGWIKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 49458; Mature: 49458
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREFEAMDFFRDETLVADPYPYLDALRRKCPVQRERHHDVVMVTGYEEAVEVFHDSEAFS CCCCHHHHHHCCCCEEECCCHHHHHHHHHCCCCHHCCCCEEEEECHHHHHHHHHCHHHHH SCVSVTGPFPGFPVPLDGDDVSALIERHRHELPMNDQLPTMDPPTHTDHRALLMRLITPK HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCHH RLKENEALMWDLADRMLDPFLTPGEGEFISGFAGPFTLLVIADLLGVPEEDQDEFLDKLQ HHCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH RQPAQTGGVGGTGAETLAHSPLEFLYGKFTGYIEDRRRNPRADVLTGLAGATFPDGSTPE HCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHH VIDVVRVAANLFSAGQETTVRLLSSALKILAERPDLQRQLRVERERIPAFIEETLRWESP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC VKGDFRLSRVPVTVGGVQLPAGTTVMVVNGAANRDPRRFENPETFDVARSNARQHLAFGR CCCCEEEEECCEEECCEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GIHSCPGAPLARAEARASLERLLDRTTDIRVNERVHGPAGNRRYEYMPTFILRGLTALHL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCEECCCCCCCCCHHHHHHHHCCHHEEEE EFDLAPAPPRDFPPAGSPVGWIKG EEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MREFEAMDFFRDETLVADPYPYLDALRRKCPVQRERHHDVVMVTGYEEAVEVFHDSEAFS CCCCHHHHHHCCCCEEECCCHHHHHHHHHCCCCHHCCCCEEEEECHHHHHHHHHCHHHHH SCVSVTGPFPGFPVPLDGDDVSALIERHRHELPMNDQLPTMDPPTHTDHRALLMRLITPK HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCHH RLKENEALMWDLADRMLDPFLTPGEGEFISGFAGPFTLLVIADLLGVPEEDQDEFLDKLQ HHCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH RQPAQTGGVGGTGAETLAHSPLEFLYGKFTGYIEDRRRNPRADVLTGLAGATFPDGSTPE HCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHH VIDVVRVAANLFSAGQETTVRLLSSALKILAERPDLQRQLRVERERIPAFIEETLRWESP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC VKGDFRLSRVPVTVGGVQLPAGTTVMVVNGAANRDPRRFENPETFDVARSNARQHLAFGR CCCCEEEEECCEEECCEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GIHSCPGAPLARAEARASLERLLDRTTDIRVNERVHGPAGNRRYEYMPTFILRGLTALHL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCEECCCCCCCCCHHHHHHHHCCHHEEEE EFDLAPAPPRDFPPAGSPVGWIKG EEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]