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The map label for this gene is yhcA [H]

Identifier: 158316452

GI number: 158316452

Start: 5600243

End: 5601682

Strand: Reverse

Name: yhcA [H]

Synonym: Franean1_4687

Alternate gene names: 158316452

Gene position: 5601682-5600243 (Counterclockwise)

Preceding gene: 158316453

Following gene: 158316450

Centisome position: 62.37

GC content: 67.64

Gene sequence:

>1440_bases
ATGACAGTAACCGCGGTGCCGTCCCAGACGGAACCAGGACGGTCCAGCTTCACCGCGCGGAATGCGCTGATCCTGATAGT
GCTGATGTGGGCTGCACAGCTTCTGGGGCTGGTCGGCCTGCTTTCCGGCAATGTTCAGGCGGAGATCGCCGTACACTTTC
ACACCGCCAGGATCTCGTGGTTCACGCTGATCACGGGCCTGGTCGGCACCTTCGCCACGCCCTTCGCGATCAAGGCCGCG
GCGATGTACGGCAAGAAGCGAGTCATGGTGGTCATCACCGTCCTCGGGTTGGTGGGAGACCTGATCGCCGCCCTTGCGAC
GAACTACTCCATGCTGCTGATCGGACGCGGCATCGCCGGGTGCTATGGCCCGATCGGGGCACTGGCCTACTCGATGGTCC
GTGACGTCCTCCCGCGCCGGCTCATCGGTCCCGCCAGCGGCCTGCTGGGCGGCGGCGTCGGGCTGGTTGCGCTGGGGGGC
CCGTTCCTGTCCGCGTGGCTCGTGGACGGTTCCGGCTTCCGTGGCGCGCTGTGGTTCATGGCCGCAGCCAGCGCGCTCAG
CCTCGTGGCGCTCGTGGTCCTCGTGCCCGAGAGTCCCGTGCGCGAGGAACGCACCAGCATCGACTGGCTGGGCGGGCTCC
TGCTCGGCGGTGGCCTGACCGCGGTCGTCTACGGGATCGGTGAAGGCGCCGGCTGGGGCTGGACCAGTGCTCGCACTCTT
TTCTTCATCGGAGGCGGTCTGGCCGCCGTGGTGGGCTTCGTCTTCACCGAAAGCCGGGTCCCGCACCCGATGATCCCACT
GCCCCTGCTGAGGCGACGGCCGGTCTGGACCATGCTGCTGACGACGTCCCTGGTCGGAGGCGCGGCGTACGCCGTCGGCA
CGGTGATGTTCCTGCTCGCCCTCATGCCGACCATTCCGGGCGTCTCCGACGGCCTGGGATTCTCCGCAACCAGGAATGCG
CTGGTCGGCGCACCCAGCAGCGTACTGATCCTCACGGGTGCGGGCGCGGCCGGAATGCTGGCCCGTAGATTCGATGCCTG
GTTCCTCCTGGCCGCCGGCGGCCTACTCGTCGCCGGTGGATATGGACTGATCTCCGTGTACCACCACACTGTGCCGCAGC
TGATGCTCCTCGGTGCCGTGACCGCGGTGGGCATGGGTCTCGTGGTGGCCACAATTCCCATCCTGGTCATCCAGGCGGTG
CACCCGGCCGAACAGGCACTGGCCAACGGTGCCCAGTCAATGGCGCAAGGGGTCACCCAGACCGTCCTCAGCCAGCTGGC
GTTCATCATCCTCGCCCGGGACAGCCAGGTCGTCCACGGAATCCGGTTCTACCGGGACGCCGGGTACTCCAACGGTCTTC
TGTTCACCGCCGGTGTCGCCGCGACCGGGACAGCGCTGGCCCTGATACTGCCGAAACGCCATGCGGCCCGGGAGCTCTGA

Upstream 100 bases:

>100_bases
CCCGAACGGCACTTCTGTCGTCTTTTTTTGATGTTTTGCGGCGCTGTCGACGTGCCCCGTGTAACCGGGGTTCGGCCATT
CTAAAGGGCAGGAGCCGTTC

Downstream 100 bases:

>100_bases
AGGTCTGAGGGCCTGGAGGACGACTGCTTCGACCGCGGGGTGACACGAGACCGGCCGGCATCGGGCCCTGGCCGGCACTG
CGGGCCGGCGGTGACTACTA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MTVTAVPSQTEPGRSSFTARNALILIVLMWAAQLLGLVGLLSGNVQAEIAVHFHTARISWFTLITGLVGTFATPFAIKAA
AMYGKKRVMVVITVLGLVGDLIAALATNYSMLLIGRGIAGCYGPIGALAYSMVRDVLPRRLIGPASGLLGGGVGLVALGG
PFLSAWLVDGSGFRGALWFMAAASALSLVALVVLVPESPVREERTSIDWLGGLLLGGGLTAVVYGIGEGAGWGWTSARTL
FFIGGGLAAVVGFVFTESRVPHPMIPLPLLRRRPVWTMLLTTSLVGGAAYAVGTVMFLLALMPTIPGVSDGLGFSATRNA
LVGAPSSVLILTGAGAAGMLARRFDAWFLLAAGGLLVAGGYGLISVYHHTVPQLMLLGAVTAVGMGLVVATIPILVIQAV
HPAEQALANGAQSMAQGVTQTVLSQLAFIILARDSQVVHGIRFYRDAGYSNGLLFTAGVAATGTALALILPKRHAAREL

Sequences:

>Translated_479_residues
MTVTAVPSQTEPGRSSFTARNALILIVLMWAAQLLGLVGLLSGNVQAEIAVHFHTARISWFTLITGLVGTFATPFAIKAA
AMYGKKRVMVVITVLGLVGDLIAALATNYSMLLIGRGIAGCYGPIGALAYSMVRDVLPRRLIGPASGLLGGGVGLVALGG
PFLSAWLVDGSGFRGALWFMAAASALSLVALVVLVPESPVREERTSIDWLGGLLLGGGLTAVVYGIGEGAGWGWTSARTL
FFIGGGLAAVVGFVFTESRVPHPMIPLPLLRRRPVWTMLLTTSLVGGAAYAVGTVMFLLALMPTIPGVSDGLGFSATRNA
LVGAPSSVLILTGAGAAGMLARRFDAWFLLAAGGLLVAGGYGLISVYHHTVPQLMLLGAVTAVGMGLVVATIPILVIQAV
HPAEQALANGAQSMAQGVTQTVLSQLAFIILARDSQVVHGIRFYRDAGYSNGLLFTAGVAATGTALALILPKRHAAREL
>Mature_478_residues
TVTAVPSQTEPGRSSFTARNALILIVLMWAAQLLGLVGLLSGNVQAEIAVHFHTARISWFTLITGLVGTFATPFAIKAAA
MYGKKRVMVVITVLGLVGDLIAALATNYSMLLIGRGIAGCYGPIGALAYSMVRDVLPRRLIGPASGLLGGGVGLVALGGP
FLSAWLVDGSGFRGALWFMAAASALSLVALVVLVPESPVREERTSIDWLGGLLLGGGLTAVVYGIGEGAGWGWTSARTLF
FIGGGLAAVVGFVFTESRVPHPMIPLPLLRRRPVWTMLLTTSLVGGAAYAVGTVMFLLALMPTIPGVSDGLGFSATRNAL
VGAPSSVLILTGAGAAGMLARRFDAWFLLAAGGLLVAGGYGLISVYHHTVPQLMLLGAVTAVGMGLVVATIPILVIQAVH
PAEQALANGAQSMAQGVTQTVLSQLAFIILARDSQVVHGIRFYRDAGYSNGLLFTAGVAATGTALALILPKRHAAREL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. EmrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004638
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49414; Mature: 49283

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTAVPSQTEPGRSSFTARNALILIVLMWAAQLLGLVGLLSGNVQAEIAVHFHTARISW
CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHH
FTLITGLVGTFATPFAIKAAAMYGKKRVMVVITVLGLVGDLIAALATNYSMLLIGRGIAG
HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHH
CYGPIGALAYSMVRDVLPRRLIGPASGLLGGGVGLVALGGPFLSAWLVDGSGFRGALWFM
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEECCHHHEEEEECCCCCCHHHHHH
AAASALSLVALVVLVPESPVREERTSIDWLGGLLLGGGLTAVVYGIGEGAGWGWTSARTL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCEE
FFIGGGLAAVVGFVFTESRVPHPMIPLPLLRRRPVWTMLLTTSLVGGAAYAVGTVMFLLA
EEECCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LMPTIPGVSDGLGFSATRNALVGAPSSVLILTGAGAAGMLARRFDAWFLLAAGGLLVAGG
HHHCCCCCCCCCCCCHHCCHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEECC
YGLISVYHHTVPQLMLLGAVTAVGMGLVVATIPILVIQAVHPAEQALANGAQSMAQGVTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
TVLSQLAFIILARDSQVVHGIRFYRDAGYSNGLLFTAGVAATGTALALILPKRHAAREL
HHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCEEEECCCHHCCCEEEEEECCHHHCCCC
>Mature Secondary Structure 
TVTAVPSQTEPGRSSFTARNALILIVLMWAAQLLGLVGLLSGNVQAEIAVHFHTARISW
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHH
FTLITGLVGTFATPFAIKAAAMYGKKRVMVVITVLGLVGDLIAALATNYSMLLIGRGIAG
HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHH
CYGPIGALAYSMVRDVLPRRLIGPASGLLGGGVGLVALGGPFLSAWLVDGSGFRGALWFM
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEECCHHHEEEEECCCCCCHHHHHH
AAASALSLVALVVLVPESPVREERTSIDWLGGLLLGGGLTAVVYGIGEGAGWGWTSARTL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCEE
FFIGGGLAAVVGFVFTESRVPHPMIPLPLLRRRPVWTMLLTTSLVGGAAYAVGTVMFLLA
EEECCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LMPTIPGVSDGLGFSATRNALVGAPSSVLILTGAGAAGMLARRFDAWFLLAAGGLLVAGG
HHHCCCCCCCCCCCCHHCCHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEECC
YGLISVYHHTVPQLMLLGAVTAVGMGLVVATIPILVIQAVHPAEQALANGAQSMAQGVTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
TVLSQLAFIILARDSQVVHGIRFYRDAGYSNGLLFTAGVAATGTALALILPKRHAAREL
HHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCEEEECCCHHCCCEEEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 8969498 [H]