| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316420
Identifier: 158316420
GI number: 158316420
Start: 5553477
End: 5553692
Strand: Reverse
Name: 158316420
Synonym: Franean1_4654
Alternate gene names: NA
Gene position: 5553692-5553477 (Counterclockwise)
Preceding gene: 158316421
Following gene: 158316417
Centisome position: 61.83
GC content: 63.89
Gene sequence:
>216_bases GTGACCGACGCCGAGGCTGGAGCGTCCAGCGCGAGGCCGTGGTTTACGTCTGTGACGGAACGCGTCAGCCAGGTCGATCT CAAAGTGGACGTTGCGCACACGGCGCGCATGTACGACTACTACCTGGGTGGTAAGGACAATTTCCCCGCCGACCGGCAGG CCGCGGAGCATGTGGGGTGCCAGAACTCGGCCACCGGCGTTGACCTGGGATTTTAG
Upstream 100 bases:
>100_bases ACGAGCCGCAGGCTGTCTGCGGTGGTCCTGCGGGGGAAAGGTCCGGCTGCCCGTTAAGGCGATTCCAGACGATTACGCCG GAACGTGGGGGGTGTGCGCG
Downstream 100 bases:
>100_bases GCTGCTCGTTCGTATTCGTTGATCAGGCCGCCGAGGACGGGCTGGCGCCTGATCCGTTCCTGGCTCAGGTCGGCGACGGG GTGGTCGGGCCGGGGCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MTDAEAGASSARPWFTSVTERVSQVDLKVDVAHTARMYDYYLGGKDNFPADRQAAEHVGCQNSATGVDLGF
Sequences:
>Translated_71_residues MTDAEAGASSARPWFTSVTERVSQVDLKVDVAHTARMYDYYLGGKDNFPADRQAAEHVGCQNSATGVDLGF >Mature_70_residues TDAEAGASSARPWFTSVTERVSQVDLKVDVAHTARMYDYYLGGKDNFPADRQAAEHVGCQNSATGVDLGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7683; Mature: 7552
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAEAGASSARPWFTSVTERVSQVDLKVDVAHTARMYDYYLGGKDNFPADRQAAEHVGC CCCCCCCCCCCCCHHHHHHHHHHHCCCEECHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC QNSATGVDLGF CCCCCCCCCCC >Mature Secondary Structure TDAEAGASSARPWFTSVTERVSQVDLKVDVAHTARMYDYYLGGKDNFPADRQAAEHVGC CCCCCCCCCCCCHHHHHHHHHHHCCCEECHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC QNSATGVDLGF CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA