The gene/protein map for NC_012489 is currently unavailable.
Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316404

Identifier: 158316404

GI number: 158316404

Start: 5531972

End: 5532127

Strand: Reverse

Name: 158316404

Synonym: Franean1_4638

Alternate gene names: NA

Gene position: 5532127-5531972 (Counterclockwise)

Preceding gene: 158316405

Following gene: 158316402

Centisome position: 61.59

GC content: 64.74

Gene sequence:

>156_bases
ATGGTCCTCCATCCACTGGTCTCACTCACTCTGTGCGGCATCGTCGTCGCAACCCTGGTCCAGAACATCCACCGTGGCCA
CTACGAGATCGCCGCCGACACCGACCCACAGCTCCGGCTGGCCGCCGCGTTCACCGAACTCGCCCACGCTGTGTGA

Upstream 100 bases:

>100_bases
GCCCTCCTCAGCCACTACCAACACCGAGGCGACCCCACGCCCCTCACCCTACGCATCTAACAAGATCTAGGAATGTAGTG
CTGGAGACTCAGTAACGTCC

Downstream 100 bases:

>100_bases
CCGCGGTCGCCGGAGCCTCTGGCGTGCGCCGGATCCTCCGAATGCAACAACGCCGCGGCGCACATCTTCCACCTGGAGCT
TTGGATGATCCGTCTGTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MVLHPLVSLTLCGIVVATLVQNIHRGHYEIAADTDPQLRLAAAFTELAHAV

Sequences:

>Translated_51_residues
MVLHPLVSLTLCGIVVATLVQNIHRGHYEIAADTDPQLRLAAAFTELAHAV
>Mature_51_residues
MVLHPLVSLTLCGIVVATLVQNIHRGHYEIAADTDPQLRLAAAFTELAHAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5491; Mature: 5491

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLHPLVSLTLCGIVVATLVQNIHRGHYEIAADTDPQLRLAAAFTELAHAV
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLHPLVSLTLCGIVVATLVQNIHRGHYEIAADTDPQLRLAAAFTELAHAV
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA