| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316402
Identifier: 158316402
GI number: 158316402
Start: 5529278
End: 5529982
Strand: Reverse
Name: 158316402
Synonym: Franean1_4636
Alternate gene names: NA
Gene position: 5529982-5529278 (Counterclockwise)
Preceding gene: 158316404
Following gene: 158316401
Centisome position: 61.57
GC content: 67.66
Gene sequence:
>705_bases ATGACGACTCCGCTGGTCCTCGTGCACGGTGGCGGCTTTGACAGCCGCTGCTGGGATCTTCTACTGCCCTGGCTGGCCAT GCCGGTGGTCGCCGTCGACCTACCCGGACGAGGGCGGCGTCCGGCGCCCCTGGAGTCAGTGACCTTCGCCGACTGTGCGG ATGCCATTGTCGAGGACGTCGACGCGGCCGATCTCGACGAATTCGTGCTCGTCGGTCACTCTCTCGCCGGGTGCTCGCTA CCGCGAGCTGTGGCCCGGCTCGGGGACCGTGTCCGCCATGTCGTCTTCCTCGCCGCGATGGTGCCTGCGTCCGGGACCGG CACCATGCACGAACTACGACCGCACGTCAGGGCGCACGTCAAGAAGTCCACGGCCGAGCGGCAGCTGACGATGGATCCCG AGCGGGCGAAACGGTTCTTCGGCAACGACCTCGACGACGGCCGGTTCGCCTGGTGCCTCGAGCGTTTGGTCCCCGAAGCG GAGCGGCTCACGACCGAACCGGTCGACCTGACGGGTCTACGCCCACCCATCCCCCGGAGCTGGGTGCGCACCACCAGAGA CGCCATTCTCCCGCCCGAAAAGCAGACACGCTTCGCCGCCCGCGTCAACGCCAGCCCAGTGATCGACCTGGACGCCGGAC ACATGTGCATGATCAGCCAGCCGGCCGCGCTGGCTGAGATCCTTCATCGAATCGCCGACACCTGA
Upstream 100 bases:
>100_bases CACGGCGGGCGACCCCTGCTTCGCCGGCATCGACGCCCGCAGGCGCAACGACGGGAGTGCGTCGAGTGGCTGGAGGCCAT TCTCCAGAGGAGCCGGGCTG
Downstream 100 bases:
>100_bases GGTATTTTCCGCCGGACGCGGACGCGGACACGGACACGGACACGTTCGAGCCTTACGCCGAAGAAGTACTCGAGTACTGC GACCGATTCCCGACCGGACG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Esterase EstC; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold-Containing Protein; Alpha/Beta Hydrolase Fold Protein; Hydrolase; Hydrolase Alpha/Beta Fold Family Protein; Alkyl Salicylate Esterase
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTTPLVLVHGGGFDSRCWDLLLPWLAMPVVAVDLPGRGRRPAPLESVTFADCADAIVEDVDAADLDEFVLVGHSLAGCSL PRAVARLGDRVRHVVFLAAMVPASGTGTMHELRPHVRAHVKKSTAERQLTMDPERAKRFFGNDLDDGRFAWCLERLVPEA ERLTTEPVDLTGLRPPIPRSWVRTTRDAILPPEKQTRFAARVNASPVIDLDAGHMCMISQPAALAEILHRIADT
Sequences:
>Translated_234_residues MTTPLVLVHGGGFDSRCWDLLLPWLAMPVVAVDLPGRGRRPAPLESVTFADCADAIVEDVDAADLDEFVLVGHSLAGCSL PRAVARLGDRVRHVVFLAAMVPASGTGTMHELRPHVRAHVKKSTAERQLTMDPERAKRFFGNDLDDGRFAWCLERLVPEA ERLTTEPVDLTGLRPPIPRSWVRTTRDAILPPEKQTRFAARVNASPVIDLDAGHMCMISQPAALAEILHRIADT >Mature_233_residues TTPLVLVHGGGFDSRCWDLLLPWLAMPVVAVDLPGRGRRPAPLESVTFADCADAIVEDVDAADLDEFVLVGHSLAGCSLP RAVARLGDRVRHVVFLAAMVPASGTGTMHELRPHVRAHVKKSTAERQLTMDPERAKRFFGNDLDDGRFAWCLERLVPEAE RLTTEPVDLTGLRPPIPRSWVRTTRDAILPPEKQTRFAARVNASPVIDLDAGHMCMISQPAALAEILHRIADT
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25674; Mature: 25543
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPLVLVHGGGFDSRCWDLLLPWLAMPVVAVDLPGRGRRPAPLESVTFADCADAIVEDV CCCCEEEEECCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC DAADLDEFVLVGHSLAGCSLPRAVARLGDRVRHVVFLAAMVPASGTGTMHELRPHVRAHV CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH KKSTAERQLTMDPERAKRFFGNDLDDGRFAWCLERLVPEAERLTTEPVDLTGLRPPIPRS HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHH WVRTTRDAILPPEKQTRFAARVNASPVIDLDAGHMCMISQPAALAEILHRIADT HHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCEEEECCCHHHHHHHHHHHCC >Mature Secondary Structure TTPLVLVHGGGFDSRCWDLLLPWLAMPVVAVDLPGRGRRPAPLESVTFADCADAIVEDV CCCEEEEECCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC DAADLDEFVLVGHSLAGCSLPRAVARLGDRVRHVVFLAAMVPASGTGTMHELRPHVRAHV CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH KKSTAERQLTMDPERAKRFFGNDLDDGRFAWCLERLVPEAERLTTEPVDLTGLRPPIPRS HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHH WVRTTRDAILPPEKQTRFAARVNASPVIDLDAGHMCMISQPAALAEILHRIADT HHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCEEEECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA