Click here to switch to the map view.

The map label for this gene is yxeQ [H]

Identifier: 158316286

GI number: 158316286

Start: 5383364

End: 5384746

Strand: Reverse

Name: yxeQ [H]

Synonym: Franean1_4513

Alternate gene names: 158316286

Gene position: 5384746-5383364 (Counterclockwise)

Preceding gene: 158316287

Following gene: 158316285

Centisome position: 59.95

GC content: 65.58

Gene sequence:

>1383_bases
ATGAACGAGACGAGGCGCACGGGCCTGGTGAACCTCACGAGGATCGTCGCGGAGTACGCCGCCTCGACCTCGATCGACGC
GTTACCTGCCGACGTCCGGGAACGTGGGCGTCTCATCGTTATGGATGAGCTGGCCTGCGCGGTCTTCGGACAGACCCGGA
CAGCGGGGAAGCTAGCCACCGGCTACGCGGCCTCTATGGGCGGAGCGGGGGCGTGCCGAATTCTCGGAACTGAGTACCGC
ACAACCGCGCCATACGCGGCTCTCGCGAATGGCACGGCCGGGCACGCCGACGAGGTCGACGGTGCTCACGTCGTCGGTGG
GCATCCCGGGGCGACGATCGTCCACGCCGTGGCGGCGATTGCCGAGCAGCGGCGGGCGACGGGCGGCACTCTGCTCAACG
CCGTCGTTCTCGGCTACGAGATCGGCAACCGGCTCATCCGCGCGTGCGGTGGGGTCTTCGGGGTGAAGTCGCGCCTTCAC
ATGCATGCGGACTTTCTTCATGCGATCGGTGCGACCGTCGCGGCGTGCCGCATCCTCGGCCTCGGCCCGGAATCGTACGG
CAACGCGATGGCCCTCGCGACATTCCAGGCCAACGGCCTGGTCGCGCTCTTCCAGGAGCAGCGCCACATCAGCAAGTCGT
TCTGCAACGGCCAGTACGCCTTCGCCGGCGTTTCGGCCGCGCTGATGGCGAATGCCGGGCTGGAAGGATGCGAGGACGTG
CTCGGCTCGGAGAACGGGCTGCTTGCGGCGTGGGGCCTTGGGGACGGCGCGAGTTCGCTGACCGACGGACTCGGCCACGA
CTACGCCGTGATGGGCGCGAACTTCAAGTTCGTCAACGCGGGCTACCCGATCCACGCGGCGGTCGAGGCAGCGATGACGG
TGATCCACGATCATCGAATTCAGACGGCCGAGATCGACACGGTCGAGGTCGGTATGCCTACCAATGCGCTGCGCGTAGTC
GACAATCGTGCCATGCACAACATCTGTCTTCAGGACATGCTTGGCGCGGCAATCGTACAGGGCGGGCTGAAGTTGCGGGA
GAGCCCCTTTCCGCTCCTTCTGTCGGACTCCGGCTTCCAGTCGATGAGGCGACGCATCCAGCTTCGGTCTGACGCTGAAC
TGGACACCGAGCAGCCGAACGGCCGCGGGGCCCGTGTGACCTTTGTGATGCGCGATGGCTTGAGGCTTTCACATCGGGTC
GATCAGCCCAAGGGTCACAGCGCGGGAGATCCCATTGGTTGGGACGACTTGCGCGACAAGTGGGTCGAAGCCCTGCCGAC
AGTCGACGTCGATCGCCTGGTTCGACTTTCCCAGGCTGTCGAGGAGCTGGACGACGTCGAGGAACTGCTCCGGATCTTCG
ACCCTCCTCGACGTACTGCATGA

Upstream 100 bases:

>100_bases
GTCGCGACGTGGGGCAGAATGACGCGCTCATCGAGATCGACGTAAGCTGTCGCTTAGTGATCGACGCGAGCACACTCGCG
ATCCAGAGAGCGTGGATTTG

Downstream 100 bases:

>100_bases
AGTATCCGAGGGCTACTTGCCCCGGCGCGCCAAACAGTGCAATGACTTCAATGCTGCACCCAGGACTACTCGGCTGAGGT
CTGCTTCGGTCGGAGCTGGT

Product: MmgE/PrpD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MNETRRTGLVNLTRIVAEYAASTSIDALPADVRERGRLIVMDELACAVFGQTRTAGKLATGYAASMGGAGACRILGTEYR
TTAPYAALANGTAGHADEVDGAHVVGGHPGATIVHAVAAIAEQRRATGGTLLNAVVLGYEIGNRLIRACGGVFGVKSRLH
MHADFLHAIGATVAACRILGLGPESYGNAMALATFQANGLVALFQEQRHISKSFCNGQYAFAGVSAALMANAGLEGCEDV
LGSENGLLAAWGLGDGASSLTDGLGHDYAVMGANFKFVNAGYPIHAAVEAAMTVIHDHRIQTAEIDTVEVGMPTNALRVV
DNRAMHNICLQDMLGAAIVQGGLKLRESPFPLLLSDSGFQSMRRRIQLRSDAELDTEQPNGRGARVTFVMRDGLRLSHRV
DQPKGHSAGDPIGWDDLRDKWVEALPTVDVDRLVRLSQAVEELDDVEELLRIFDPPRRTA

Sequences:

>Translated_460_residues
MNETRRTGLVNLTRIVAEYAASTSIDALPADVRERGRLIVMDELACAVFGQTRTAGKLATGYAASMGGAGACRILGTEYR
TTAPYAALANGTAGHADEVDGAHVVGGHPGATIVHAVAAIAEQRRATGGTLLNAVVLGYEIGNRLIRACGGVFGVKSRLH
MHADFLHAIGATVAACRILGLGPESYGNAMALATFQANGLVALFQEQRHISKSFCNGQYAFAGVSAALMANAGLEGCEDV
LGSENGLLAAWGLGDGASSLTDGLGHDYAVMGANFKFVNAGYPIHAAVEAAMTVIHDHRIQTAEIDTVEVGMPTNALRVV
DNRAMHNICLQDMLGAAIVQGGLKLRESPFPLLLSDSGFQSMRRRIQLRSDAELDTEQPNGRGARVTFVMRDGLRLSHRV
DQPKGHSAGDPIGWDDLRDKWVEALPTVDVDRLVRLSQAVEELDDVEELLRIFDPPRRTA
>Mature_460_residues
MNETRRTGLVNLTRIVAEYAASTSIDALPADVRERGRLIVMDELACAVFGQTRTAGKLATGYAASMGGAGACRILGTEYR
TTAPYAALANGTAGHADEVDGAHVVGGHPGATIVHAVAAIAEQRRATGGTLLNAVVLGYEIGNRLIRACGGVFGVKSRLH
MHADFLHAIGATVAACRILGLGPESYGNAMALATFQANGLVALFQEQRHISKSFCNGQYAFAGVSAALMANAGLEGCEDV
LGSENGLLAAWGLGDGASSLTDGLGHDYAVMGANFKFVNAGYPIHAAVEAAMTVIHDHRIQTAEIDTVEVGMPTNALRVV
DNRAMHNICLQDMLGAAIVQGGLKLRESPFPLLLSDSGFQSMRRRIQLRSDAELDTEQPNGRGARVTFVMRDGLRLSHRV
DQPKGHSAGDPIGWDDLRDKWVEALPTVDVDRLVRLSQAVEELDDVEELLRIFDPPRRTA

Specific function: Unknown

COG id: COG2079

COG function: function code R; Uncharacterized protein involved in propionate catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prpD family [H]

Homologues:

Organism=Homo sapiens, GI310129732, Length=455, Percent_Identity=23.0769230769231, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI310110533, Length=455, Percent_Identity=23.0769230769231, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI310123058, Length=458, Percent_Identity=23.3624454148472, Blast_Score=78, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005656 [H]

Pfam domain/function: PF03972 MmgE_PrpD [H]

EC number: NA

Molecular weight: Translated: 48857; Mature: 48857

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETRRTGLVNLTRIVAEYAASTSIDALPADVRERGRLIVMDELACAVFGQTRTAGKLAT
CCCCHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEHHHHHHHCCCCCCCHHHC
GYAASMGGAGACRILGTEYRTTAPYAALANGTAGHADEVDGAHVVGGHPGATIVHAVAAI
CHHHHCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH
AEQRRATGGTLLNAVVLGYEIGNRLIRACGGVFGVKSRLHMHADFLHAIGATVAACRILG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LGPESYGNAMALATFQANGLVALFQEQRHISKSFCNGQYAFAGVSAALMANAGLEGCEDV
CCCHHHCCEEEEEEEECCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHH
LGSENGLLAAWGLGDGASSLTDGLGHDYAVMGANFKFVNAGYPIHAAVEAAMTVIHDHRI
HCCCCCEEEEECCCCCHHHHHHCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHCCC
QTAEIDTVEVGMPTNALRVVDNRAMHNICLQDMLGAAIVQGGLKLRESPFPLLLSDSGFQ
EEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHH
SMRRRIQLRSDAELDTEQPNGRGARVTFVMRDGLRLSHRVDQPKGHSAGDPIGWDDLRDK
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCCCCHHHHHHH
WVEALPTVDVDRLVRLSQAVEELDDVEELLRIFDPPRRTA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNETRRTGLVNLTRIVAEYAASTSIDALPADVRERGRLIVMDELACAVFGQTRTAGKLAT
CCCCHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEHHHHHHHCCCCCCCHHHC
GYAASMGGAGACRILGTEYRTTAPYAALANGTAGHADEVDGAHVVGGHPGATIVHAVAAI
CHHHHCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH
AEQRRATGGTLLNAVVLGYEIGNRLIRACGGVFGVKSRLHMHADFLHAIGATVAACRILG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LGPESYGNAMALATFQANGLVALFQEQRHISKSFCNGQYAFAGVSAALMANAGLEGCEDV
CCCHHHCCEEEEEEEECCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHH
LGSENGLLAAWGLGDGASSLTDGLGHDYAVMGANFKFVNAGYPIHAAVEAAMTVIHDHRI
HCCCCCEEEEECCCCCHHHHHHCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHCCC
QTAEIDTVEVGMPTNALRVVDNRAMHNICLQDMLGAAIVQGGLKLRESPFPLLLSDSGFQ
EEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHH
SMRRRIQLRSDAELDTEQPNGRGARVTFVMRDGLRLSHRVDQPKGHSAGDPIGWDDLRDK
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCCCCHHHHHHH
WVEALPTVDVDRLVRLSQAVEELDDVEELLRIFDPPRRTA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]