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The map label for this gene is yegE [C]

Identifier: 158316281

GI number: 158316281

Start: 5378942

End: 5380561

Strand: Reverse

Name: yegE [C]

Synonym: Franean1_4508

Alternate gene names: 158316281

Gene position: 5380561-5378942 (Counterclockwise)

Preceding gene: 158316283

Following gene: 158316274

Centisome position: 59.9

GC content: 63.7

Gene sequence:

>1620_bases
ATGTGCGACATTCTAGGCCGGTCGAGATTCGATCTTATCGGCGGTACCTGGGACGCTCTGGAGCCTCCCCCTGACGGTAA
CGGCTGGGAGGATGTGTCGCAGCTGCTGAACGGCGAACGGATTGTGTTGCGGCATCTGACCCGGTTCGCCCGCCTCGATG
GCAGCGTGATTCATATCGTGATAACGACCCGAGTTGAGAAGTACGCAGACGAGCCCTGCTGTCTCGGCCAGATACTAGAC
GTGACCGACGCTGCCGTTACTCGCGACCAATTGCAGCTGATATTGGAAAACAGTCCTGTTTCCATGGGGCTTACAGATCT
ATCCGGCCGGATCTTAGTATCAGGTGGCGGCTCCGTTCCTGCCCTGGCCGAGGACCTGGAGGCTGCTGGGCGGACGTCCA
TCTTCGAGGTTTTCAAGCACACCCCGGATACGCTGACAATGATGCGACGAGCGATGGACGGCGAGCCGTCCATCGGAATG
ATCCAGGCCTACGGACACTCCTACGACCTCCACATTAGGCCGATCCGTAATCCGGCCGGGCAGGTCAGCCACGTTGCTTC
GATCGCCACAGACGTGACGGAGCGCGAACGAGCACATGATGAGCAGAGCACCGTCACCGAACTGGCTCATCAGGCGTTGC
AGATCGTGGAGCCGGAACGGTTGTGGAACCACGCCGCCGCCGTCCTAGCCAGCCGGCTGGACGCGGCCGTCACCGTGCAT
ATGACCGAACCAGGACACGGACCTGACCTGATCGCCGCGGTTGGAGTGCTGCCACCGGCTCCCGTCACCGCTGCGGCTGT
CCGGGACGCCCTCCTAATCGGGCCGCCGGACCAGGGCAACGTAACAGGCGCGCGGAACCTCCGCCGGACGGGGCGCTGGT
TAACTGTGTCCCTGCCGCTCGGCCGACCCAACGCGCCCGCCGCCATCCTCACCATCCACCGGACGGACCGGGAGCTTCAC
GAAGACGACAGCCAGGAAACGGCAGCCGAGCCGTTCACACCTGGCGAGGTGGAATTCGTCGATGCGGTCGCCAGTGTGCT
TGGTGCCGCAGCGGTCCGGTTCGCGATGGAACGCGAAGCCAACTACCGTGCGTTGCACGACAGCCTGACCGACCTCCCCA
ACCGCGTCGCCCTGCTCGACCGGCTCAAGTGCAACCTCGAACAAAGCCGGAGCGACGGTCTCCGTACCGGCGTCATATTC
ATCGATTTGGACGGTTTTAAGATTGTAAATGACAGCCTCGGTCATCTTGTCGGCGACGACGTCCTGCGTGAGGTAGCCGA
CCGCCTGCGCGCCTCGGCCCGGCCGAATGACGTCGTGGCCCGGCTTGCCGGCGACGAGTTCGCGATCCTCTGCGAACAGG
TCTCCACGATCATGGAACTCGAGCGAGCGGCGCACGGTGTCATCACCGCACTTGCCAAGCCGATCGCGCTACCGGAAGCC
GACGTTACAATTACCGCCAGTGCCGGAGTGGCAATCTCGGGTACCGGCCTCGCCAATGCCGATCGGCTCCTCAACGCCTC
CGACGTCGCGATGTACGTTGCGAAACGAGCCGGACCCGGCCACTGCGTCGCTTACCAGCCGGCCATGCGCCTCGACCAGG
CGACGTCACCGGCCCGGTAG

Upstream 100 bases:

>100_bases
GACGGCGTGGGTTTGGGATGATGAGCTGTTCGATCGCCTTGAGATCGGACTGAGTCTTACCTGCCTTCGAAATCGGCAGA
TCTGGCGAGTCAATGCGGCC

Downstream 100 bases:

>100_bases
GTCAACGGCGCTAACCGTCGGCGGCACGCTACTTGGGAGTGTCCGGCTGCCGGCGAGGGCGTGCAGGCGAGACTAACACA
GAGGGCGCGCCCCGGCCCGT

Product: PAS/PAC sensor-containing diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MCDILGRSRFDLIGGTWDALEPPPDGNGWEDVSQLLNGERIVLRHLTRFARLDGSVIHIVITTRVEKYADEPCCLGQILD
VTDAAVTRDQLQLILENSPVSMGLTDLSGRILVSGGGSVPALAEDLEAAGRTSIFEVFKHTPDTLTMMRRAMDGEPSIGM
IQAYGHSYDLHIRPIRNPAGQVSHVASIATDVTERERAHDEQSTVTELAHQALQIVEPERLWNHAAAVLASRLDAAVTVH
MTEPGHGPDLIAAVGVLPPAPVTAAAVRDALLIGPPDQGNVTGARNLRRTGRWLTVSLPLGRPNAPAAILTIHRTDRELH
EDDSQETAAEPFTPGEVEFVDAVASVLGAAAVRFAMEREANYRALHDSLTDLPNRVALLDRLKCNLEQSRSDGLRTGVIF
IDLDGFKIVNDSLGHLVGDDVLREVADRLRASARPNDVVARLAGDEFAILCEQVSTIMELERAAHGVITALAKPIALPEA
DVTITASAGVAISGTGLANADRLLNASDVAMYVAKRAGPGHCVAYQPAMRLDQATSPAR

Sequences:

>Translated_539_residues
MCDILGRSRFDLIGGTWDALEPPPDGNGWEDVSQLLNGERIVLRHLTRFARLDGSVIHIVITTRVEKYADEPCCLGQILD
VTDAAVTRDQLQLILENSPVSMGLTDLSGRILVSGGGSVPALAEDLEAAGRTSIFEVFKHTPDTLTMMRRAMDGEPSIGM
IQAYGHSYDLHIRPIRNPAGQVSHVASIATDVTERERAHDEQSTVTELAHQALQIVEPERLWNHAAAVLASRLDAAVTVH
MTEPGHGPDLIAAVGVLPPAPVTAAAVRDALLIGPPDQGNVTGARNLRRTGRWLTVSLPLGRPNAPAAILTIHRTDRELH
EDDSQETAAEPFTPGEVEFVDAVASVLGAAAVRFAMEREANYRALHDSLTDLPNRVALLDRLKCNLEQSRSDGLRTGVIF
IDLDGFKIVNDSLGHLVGDDVLREVADRLRASARPNDVVARLAGDEFAILCEQVSTIMELERAAHGVITALAKPIALPEA
DVTITASAGVAISGTGLANADRLLNASDVAMYVAKRAGPGHCVAYQPAMRLDQATSPAR
>Mature_539_residues
MCDILGRSRFDLIGGTWDALEPPPDGNGWEDVSQLLNGERIVLRHLTRFARLDGSVIHIVITTRVEKYADEPCCLGQILD
VTDAAVTRDQLQLILENSPVSMGLTDLSGRILVSGGGSVPALAEDLEAAGRTSIFEVFKHTPDTLTMMRRAMDGEPSIGM
IQAYGHSYDLHIRPIRNPAGQVSHVASIATDVTERERAHDEQSTVTELAHQALQIVEPERLWNHAAAVLASRLDAAVTVH
MTEPGHGPDLIAAVGVLPPAPVTAAAVRDALLIGPPDQGNVTGARNLRRTGRWLTVSLPLGRPNAPAAILTIHRTDRELH
EDDSQETAAEPFTPGEVEFVDAVASVLGAAAVRFAMEREANYRALHDSLTDLPNRVALLDRLKCNLEQSRSDGLRTGVIF
IDLDGFKIVNDSLGHLVGDDVLREVADRLRASARPNDVVARLAGDEFAILCEQVSTIMELERAAHGVITALAKPIALPEA
DVTITASAGVAISGTGLANADRLLNASDVAMYVAKRAGPGHCVAYQPAMRLDQATSPAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1788381, Length=173, Percent_Identity=36.4161849710983, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787541, Length=177, Percent_Identity=35.5932203389831, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87082007, Length=174, Percent_Identity=31.0344827586207, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI145693134, Length=165, Percent_Identity=32.1212121212121, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87081977, Length=179, Percent_Identity=32.9608938547486, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1788956, Length=154, Percent_Identity=36.3636363636364, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1786584, Length=166, Percent_Identity=30.1204819277108, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1787816, Length=251, Percent_Identity=29.4820717131474, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787262, Length=215, Percent_Identity=26.9767441860465, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1788085, Length=165, Percent_Identity=29.6969696969697, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081881, Length=175, Percent_Identity=32, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 57828; Mature: 57828

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50113 PAC ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDILGRSRFDLIGGTWDALEPPPDGNGWEDVSQLLNGERIVLRHLTRFARLDGSVIHIV
CCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
ITTRVEKYADEPCCLGQILDVTDAAVTRDQLQLILENSPVSMGLTDLSGRILVSGGGSVP
EEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECEECCCCEEEEECCCCCC
ALAEDLEAAGRTSIFEVFKHTPDTLTMMRRAMDGEPSIGMIQAYGHSYDLHIRPIRNPAG
HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCH
QVSHVASIATDVTERERAHDEQSTVTELAHQALQIVEPERLWNHAAAVLASRLDAAVTVH
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEE
MTEPGHGPDLIAAVGVLPPAPVTAAAVRDALLIGPPDQGNVTGARNLRRTGRWLTVSLPL
EECCCCCHHHHHHHCCCCCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCEEEEEECC
GRPNAPAAILTIHRTDRELHEDDSQETAAEPFTPGEVEFVDAVASVLGAAAVRFAMEREA
CCCCCCEEEEEEECCCHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
NYRALHDSLTDLPNRVALLDRLKCNLEQSRSDGLRTGVIFIDLDGFKIVNDSLGHLVGDD
CHHHHHHHHHHCCHHHHHHHHHHHCHHHHCCCCCEEEEEEEECCCCEEECHHHHHHHHHH
VLREVADRLRASARPNDVVARLAGDEFAILCEQVSTIMELERAAHGVITALAKPIALPEA
HHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DVTITASAGVAISGTGLANADRLLNASDVAMYVAKRAGPGHCVAYQPAMRLDQATSPAR
CEEEEECCCEEEECCCCCCHHHHCCHHHHHHHHHHCCCCCCEEEECCHHHHHCCCCCCC
>Mature Secondary Structure
MCDILGRSRFDLIGGTWDALEPPPDGNGWEDVSQLLNGERIVLRHLTRFARLDGSVIHIV
CCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
ITTRVEKYADEPCCLGQILDVTDAAVTRDQLQLILENSPVSMGLTDLSGRILVSGGGSVP
EEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECEECCCCEEEEECCCCCC
ALAEDLEAAGRTSIFEVFKHTPDTLTMMRRAMDGEPSIGMIQAYGHSYDLHIRPIRNPAG
HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCH
QVSHVASIATDVTERERAHDEQSTVTELAHQALQIVEPERLWNHAAAVLASRLDAAVTVH
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEE
MTEPGHGPDLIAAVGVLPPAPVTAAAVRDALLIGPPDQGNVTGARNLRRTGRWLTVSLPL
EECCCCCHHHHHHHCCCCCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCEEEEEECC
GRPNAPAAILTIHRTDRELHEDDSQETAAEPFTPGEVEFVDAVASVLGAAAVRFAMEREA
CCCCCCEEEEEEECCCHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
NYRALHDSLTDLPNRVALLDRLKCNLEQSRSDGLRTGVIFIDLDGFKIVNDSLGHLVGDD
CHHHHHHHHHHCCHHHHHHHHHHHCHHHHCCCCCEEEEEEEECCCCEEECHHHHHHHHHH
VLREVADRLRASARPNDVVARLAGDEFAILCEQVSTIMELERAAHGVITALAKPIALPEA
HHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DVTITASAGVAISGTGLANADRLLNASDVAMYVAKRAGPGHCVAYQPAMRLDQATSPAR
CEEEEECCCEEEECCCCCCHHHHCCHHHHHHHHHHCCCCCCEEEECCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]