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The map label for this gene is insF1 [H]

Identifier: 158316244

GI number: 158316244

Start: 5334239

End: 5335042

Strand: Reverse

Name: insF1 [H]

Synonym: Franean1_4468

Alternate gene names: 158316244

Gene position: 5335042-5334239 (Counterclockwise)

Preceding gene: 158316245

Following gene: 158316243

Centisome position: 59.4

GC content: 68.41

Gene sequence:

>804_bases
GTGAGCGACACGTTCGAGTTCATCGATGCGGAGTACGCCGCCCGCACCACCACGAACACCAGTGCACCAGCGCCGTCGGT
CATCCAGATGTGCGCCTGGCTTAGTGTCTCCCGTTCGGGTTTCTACGAGTGGCGTGACCGCCCCGCCTCCGCGACCGCGA
CCCGCCGCGGCGCACTCGCCACACTCGTCGTTCGGTCGTTCACCGCCTCCGACGGCACCTACGGCTACCGCCGTGTGCAC
GCTGACCTGCTCGCCTGGGGCCGCCCCTGCAGCCCCGAGCTCGTCCGCGCCCTCATGCGCGAGCAGGGCCTGGTGCCCTG
CCAGCCCCGCCCCTGGCGACACACCCTGACCGAGCCCGGCCAGACCCCGGCCGCGATCCCCGACCTGCTGCAGCGCGACT
TCACCGCCGACACTCCCGGAACCAAAATGGTCGGCGACATCACCTACATTCCCACCTGGGAAGGCTGGCTGTATCTCGCG
ACCGTCATCGACTGCCACACGAAAGCCGTCATCGGCTGGGCAATGGACGACAACTACAAGACCGGGCTCATCGAAACAGC
CATCACCATGGCCGCCCGTAACCACCAGCTCACCGACGGGGCGATTTTTCATTCGGACCGCGGAAGCAACGGCGGATTCA
ATTGGTCGTCGCAACACCTCGATCCGGAGGTGTGGGAATGGGACGGCCGGCGGATTGGACGCAGACGGTCACGGGGCGGG
CGGGGATGTGCTCGCCGGGGCGGCCGCCGGTGGCGCGGTGGGAGCATCAGCAGCGGTTCTGGGCCGCGGTCGCGCGTGGG
CTGA

Upstream 100 bases:

>100_bases
AACGCGCCCGGCTACGTGAACTCGAGCGGCAGAACCGCGAGCTGCGCATGGAAAACGAGTTCCTGAAAAAAGCCGCAGCG
TACTTCGCCAAGGATCATCG

Downstream 100 bases:

>100_bases
GCAGCGAGGATGCCGGTGTCGCGGCCGGCGTGTCGCCGGCGGTCGGGACCCGGTGGTTCCGCAACTGTGGCGGGATGCCC
CCTTCGGACTTCCCCGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSDTFEFIDAEYAARTTTNTSAPAPSVIQMCAWLSVSRSGFYEWRDRPASATATRRGALATLVVRSFTASDGTYGYRRVH
ADLLAWGRPCSPELVRALMREQGLVPCQPRPWRHTLTEPGQTPAAIPDLLQRDFTADTPGTKMVGDITYIPTWEGWLYLA
TVIDCHTKAVIGWAMDDNYKTGLIETAITMAARNHQLTDGAIFHSDRGSNGGFNWSSQHLDPEVWEWDGRRIGRRRSRGG
RGCARRGGRRWRGGSISSGSGPRSRVG

Sequences:

>Translated_267_residues
MSDTFEFIDAEYAARTTTNTSAPAPSVIQMCAWLSVSRSGFYEWRDRPASATATRRGALATLVVRSFTASDGTYGYRRVH
ADLLAWGRPCSPELVRALMREQGLVPCQPRPWRHTLTEPGQTPAAIPDLLQRDFTADTPGTKMVGDITYIPTWEGWLYLA
TVIDCHTKAVIGWAMDDNYKTGLIETAITMAARNHQLTDGAIFHSDRGSNGGFNWSSQHLDPEVWEWDGRRIGRRRSRGG
RGCARRGGRRWRGGSISSGSGPRSRVG
>Mature_266_residues
SDTFEFIDAEYAARTTTNTSAPAPSVIQMCAWLSVSRSGFYEWRDRPASATATRRGALATLVVRSFTASDGTYGYRRVHA
DLLAWGRPCSPELVRALMREQGLVPCQPRPWRHTLTEPGQTPAAIPDLLQRDFTADTPGTKMVGDITYIPTWEGWLYLAT
VIDCHTKAVIGWAMDDNYKTGLIETAITMAARNHQLTDGAIFHSDRGSNGGFNWSSQHLDPEVWEWDGRRIGRRRSRGGR
GCARRGGRRWRGGSISSGSGPRSRVG

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=187, Percent_Identity=29.9465240641711, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI1788405, Length=185, Percent_Identity=37.8378378378378, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1787263, Length=185, Percent_Identity=37.8378378378378, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1786753, Length=185, Percent_Identity=37.8378378378378, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1786570, Length=185, Percent_Identity=37.8378378378378, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1786490, Length=185, Percent_Identity=37.8378378378378, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1789981, Length=175, Percent_Identity=28, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 29620; Mature: 29488

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTFEFIDAEYAARTTTNTSAPAPSVIQMCAWLSVSRSGFYEWRDRPASATATRRGALA
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHH
TLVVRSFTASDGTYGYRRVHADLLAWGRPCSPELVRALMREQGLVPCQPRPWRHTLTEPG
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QTPAAIPDLLQRDFTADTPGTKMVGDITYIPTWEGWLYLATVIDCHTKAVIGWAMDDNYK
CCCHHHHHHHHHCCCCCCCCCEEEECEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCC
TGLIETAITMAARNHQLTDGAIFHSDRGSNGGFNWSSQHLDPEVWEWDGRRIGRRRSRGG
HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHEECCCHHHHHHHCCCC
RGCARRGGRRWRGGSISSGSGPRSRVG
CCHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDTFEFIDAEYAARTTTNTSAPAPSVIQMCAWLSVSRSGFYEWRDRPASATATRRGALA
CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHH
TLVVRSFTASDGTYGYRRVHADLLAWGRPCSPELVRALMREQGLVPCQPRPWRHTLTEPG
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QTPAAIPDLLQRDFTADTPGTKMVGDITYIPTWEGWLYLATVIDCHTKAVIGWAMDDNYK
CCCHHHHHHHHHCCCCCCCCCEEEECEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCC
TGLIETAITMAARNHQLTDGAIFHSDRGSNGGFNWSSQHLDPEVWEWDGRRIGRRRSRGG
HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHEECCCHHHHHHHCCCC
RGCARRGGRRWRGGSISSGSGPRSRVG
CCHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]