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The map label for this gene is 158316240

Identifier: 158316240

GI number: 158316240

Start: 5331565

End: 5332086

Strand: Reverse

Name: 158316240

Synonym: Franean1_4464

Alternate gene names: NA

Gene position: 5332086-5331565 (Counterclockwise)

Preceding gene: 158316241

Following gene: 158316237

Centisome position: 59.36

GC content: 68.01

Gene sequence:

>522_bases
GTGGACACCGTGTTCCTGCGGCGGATCTACGTGTTCTTCGTCGTCGAGCACGCCACCTGCCGTGTCCACGTCCTCGGGGT
CACGAAGCGCCCGACCGCGGCGTGGGTCACCCAGCGTGCACGGAACCTGCTGATGGATCTCGAGGAGCGTGGCCACCGGT
TCCGGTTCCTCCTCCGTGACCGCGATACGAAGTTCGCGGCTTCCTTCGACGCTGTCTTCGCCGGGGCCGGCATCGACGTG
GTACGCACACCCCCGCAAGCCCCGCAGGCGAACGCGATCGCGGAACGCTGGGTCGGCACCGTCCGCAGGGAATGCACCGA
CAGACTGTTGATCGTCTCCGAACGGCACCTGACGTCGGTCCTCGGCGGCTACGCCGAGCATTTCAACACCCACCGGCCTC
ACCGCTCCCTCGGTCAGCACCCGCCCGACTCGCCACCCGTGGTCGCCCCGACGCTGGGGTTCGCCGTCCGTCGCACACGC
ATCCTCGGCGGCATGATCAACGAATACCGCAACGCCGCCTGA

Upstream 100 bases:

>100_bases
CCGCGCCGGTGTCGATCCCGTGCCCCGCCGGGCCGACGCCTCCTGGCGCACGTTCCTGTCTGCCCAGGCCTCCGGCCTGC
TGGCCTGAGATTTCTTCACC

Downstream 100 bases:

>100_bases
CATCTCCCGCGGAAGATCACTTCAACCGCAAAAGGGCAGATCACAGGCCGAAATCCGGTTTTTGGAGCCTCGCAAGATCG
AAGGGCTCGGCGCGGAGCTG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase; Transposase; Integrase Catalytic Subunit; LOW QUALITY PROTEIN Integrase; LOW QUALITY PROTEIN Integrase Catalytic Region; Transposase IS; Tranposase

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MDTVFLRRIYVFFVVEHATCRVHVLGVTKRPTAAWVTQRARNLLMDLEERGHRFRFLLRDRDTKFAASFDAVFAGAGIDV
VRTPPQAPQANAIAERWVGTVRRECTDRLLIVSERHLTSVLGGYAEHFNTHRPHRSLGQHPPDSPPVVAPTLGFAVRRTR
ILGGMINEYRNAA

Sequences:

>Translated_173_residues
MDTVFLRRIYVFFVVEHATCRVHVLGVTKRPTAAWVTQRARNLLMDLEERGHRFRFLLRDRDTKFAASFDAVFAGAGIDV
VRTPPQAPQANAIAERWVGTVRRECTDRLLIVSERHLTSVLGGYAEHFNTHRPHRSLGQHPPDSPPVVAPTLGFAVRRTR
ILGGMINEYRNAA
>Mature_173_residues
MDTVFLRRIYVFFVVEHATCRVHVLGVTKRPTAAWVTQRARNLLMDLEERGHRFRFLLRDRDTKFAASFDAVFAGAGIDV
VRTPPQAPQANAIAERWVGTVRRECTDRLLIVSERHLTSVLGGYAEHFNTHRPHRSLGQHPPDSPPVVAPTLGFAVRRTR
ILGGMINEYRNAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19610; Mature: 19610

Theoretical pI: Translated: 11.37; Mature: 11.37

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTVFLRRIYVFFVVEHATCRVHVLGVTKRPTAAWVTQRARNLLMDLEERGHRFRFLLRD
CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
RDTKFAASFDAVFAGAGIDVVRTPPQAPQANAIAERWVGTVRRECTDRLLIVSERHLTSV
CCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHH
LGGYAEHFNTHRPHRSLGQHPPDSPPVVAPTLGFAVRRTRILGGMINEYRNAA
HHHHHHHHCCCCCCHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDTVFLRRIYVFFVVEHATCRVHVLGVTKRPTAAWVTQRARNLLMDLEERGHRFRFLLRD
CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
RDTKFAASFDAVFAGAGIDVVRTPPQAPQANAIAERWVGTVRRECTDRLLIVSERHLTSV
CCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHH
LGGYAEHFNTHRPHRSLGQHPPDSPPVVAPTLGFAVRRTRILGGMINEYRNAA
HHHHHHHHCCCCCCHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA