Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316226

Identifier: 158316226

GI number: 158316226

Start: 5315832

End: 5316692

Strand: Reverse

Name: 158316226

Synonym: Franean1_4450

Alternate gene names: NA

Gene position: 5316692-5315832 (Counterclockwise)

Preceding gene: 158316227

Following gene: 158316225

Centisome position: 59.19

GC content: 73.05

Gene sequence:

>861_bases
GTGACCCACTTCGGCATCTCCCTCCTGCGCGTGTCACCAGGCGCATGGACGGAGGTGGCCCAGGAGGCCGAGCGGCTCGG
TTTCGAGTCAGTGTGGATGTCGGACCACCTGGTGCTGCCCGCCGAGATGGACGCCGCGGACTACCCGGACGGTCGCCTGC
CGATCCGCCCCGAGACCCCGGTGTTCGACTCGCTGGTCTACCTCGCCGCGATCGCGGCGAGGACGCGGACGCTGCGCCTC
GGAACGTACGTCTACCAGCTCGGCCTGCGGCACCCGCTGGCGGTGGCGCGGGCGGTGGCGACGCTGGACGTGGTGTCCGC
CGGTCGGGTCGAGCTGGGGATCGGCGCCGGGTGGATGCCGGCGGAGTGGGCCGCCGCCGGCATGCCGCAGTCTGTGGACG
GAGCCCGTCCCGCGGCACGACGGCGAGTTCTTCCGGTTCCCAGCCGTCCGGTTCGAACCGAAGCCAGTCCAGGATCCCCT
GCTGGTGCACGTCGGCGGAGAGTCACCGCCCGCCCTGCGCAGGGCCGTCCGGTCCGGCGACGGATGGATCGGGATGCACG
ATACGCCCGCCTCCGTCGAGGCGCCGCTGGCCAGCCTGCGCAACGCCGCCGCCCGGCACGGCCGCACCCGGCCGCTGACC
ACCACCGTCGCAGCCCCGCCGGGGGAGGATGTGGACGTCGCCGGCTGGCTCGCCTCGGGGGTGGACCGGGTCATCGTGAC
ACCCTGGGCGCGGTCCCGAGACGCGATCCCCGGGATGCGCCGGTTCGCCGAGCGCATCCCCGCGAGACGTGCGGCCAGCT
AGCTACTGTAATGGTCGGCGCCGGCCATGAGCTGGAGCAGTACCCGACAGCAATCAGGTGA

Upstream 100 bases:

>100_bases
ACCCCACGGTCGCGTCGATCGCCCTGATCATGTCGTTCGTGACCGCTGCCGGGGTCGCGGTGGCGACCTTCATCGGCGGC
TCGGACGCGCTGCGGCGCCT

Downstream 100 bases:

>100_bases
CGGCGGCGTGCCATTCGACGCGAGCGCGGACCCCACGTGTTGGACACGCTGGCAGCCTCCAGACGCTCCCCAGCTCGACG
CCTCGTCGCCACGCCACGGC

Product: coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein

Products: NA

Alternate protein names: Hybride Transferase/; Luciferase-Like Protein; Luciferase-Like Subgroup

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTHFGISLLRVSPGAWTEVAQEAERLGFESVWMSDHLVLPAEMDAADYPDGRLPIRPETPVFDSLVYLAAIAARTRTLRL
GTYVYQLGLRHPLAVARAVATLDVVSAGRVELGIGAGWMPAEWAAAGMPQSVDGARPAARRRVLPVPSRPVRTEASPGSP
AGARRRRVTARPAQGRPVRRRMDRDARYARLRRGAAGQPAQRRRPARPHPAADHHRRSPAGGGCGRRRLARLGGGPGHRD
TLGAVPRRDPRDAPVRRAHPRETCGQLATVMVGAGHELEQYPTAIR

Sequences:

>Translated_286_residues
MTHFGISLLRVSPGAWTEVAQEAERLGFESVWMSDHLVLPAEMDAADYPDGRLPIRPETPVFDSLVYLAAIAARTRTLRL
GTYVYQLGLRHPLAVARAVATLDVVSAGRVELGIGAGWMPAEWAAAGMPQSVDGARPAARRRVLPVPSRPVRTEASPGSP
AGARRRRVTARPAQGRPVRRRMDRDARYARLRRGAAGQPAQRRRPARPHPAADHHRRSPAGGGCGRRRLARLGGGPGHRD
TLGAVPRRDPRDAPVRRAHPRETCGQLATVMVGAGHELEQYPTAIR
>Mature_285_residues
THFGISLLRVSPGAWTEVAQEAERLGFESVWMSDHLVLPAEMDAADYPDGRLPIRPETPVFDSLVYLAAIAARTRTLRLG
TYVYQLGLRHPLAVARAVATLDVVSAGRVELGIGAGWMPAEWAAAGMPQSVDGARPAARRRVLPVPSRPVRTEASPGSPA
GARRRRVTARPAQGRPVRRRMDRDARYARLRRGAAGQPAQRRRPARPHPAADHHRRSPAGGGCGRRRLARLGGGPGHRDT
LGAVPRRDPRDAPVRRAHPRETCGQLATVMVGAGHELEQYPTAIR

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31120; Mature: 30989

Theoretical pI: Translated: 12.12; Mature: 12.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHFGISLLRVSPGAWTEVAQEAERLGFESVWMSDHLVLPAEMDAADYPDGRLPIRPETP
CCCCCEEEEEECCCHHHHHHHHHHHCCHHHEECCCCEEECCCCCCCCCCCCCCCCCCCCC
VFDSLVYLAAIAARTRTLRLGTYVYQLGLRHPLAVARAVATLDVVSAGRVELGIGAGWMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCC
AEWAAAGMPQSVDGARPAARRRVLPVPSRPVRTEASPGSPAGARRRRVTARPAQGRPVRR
HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHH
RMDRDARYARLRRGAAGQPAQRRRPARPHPAADHHRRSPAGGGCGRRRLARLGGGPGHRD
HHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
TLGAVPRRDPRDAPVRRAHPRETCGQLATVMVGAGHELEQYPTAIR
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCC
>Mature Secondary Structure 
THFGISLLRVSPGAWTEVAQEAERLGFESVWMSDHLVLPAEMDAADYPDGRLPIRPETP
CCCCEEEEEECCCHHHHHHHHHHHCCHHHEECCCCEEECCCCCCCCCCCCCCCCCCCCC
VFDSLVYLAAIAARTRTLRLGTYVYQLGLRHPLAVARAVATLDVVSAGRVELGIGAGWMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCC
AEWAAAGMPQSVDGARPAARRRVLPVPSRPVRTEASPGSPAGARRRRVTARPAQGRPVRR
HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHH
RMDRDARYARLRRGAAGQPAQRRRPARPHPAADHHRRSPAGGGCGRRRLARLGGGPGHRD
HHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
TLGAVPRRDPRDAPVRRAHPRETCGQLATVMVGAGHELEQYPTAIR
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA