Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316180

Identifier: 158316180

GI number: 158316180

Start: 5253477

End: 5255843

Strand: Reverse

Name: 158316180

Synonym: Franean1_4403

Alternate gene names: NA

Gene position: 5255843-5253477 (Counterclockwise)

Preceding gene: 158316181

Following gene: 158316179

Centisome position: 58.52

GC content: 73.64

Gene sequence:

>2367_bases
GTGGCCACCTCGGAGACGACCGACATCCCGGTCGGTGATCTACGCTTCTACGACAACTACGTGCCCGCGCTGGCCGCCGG
CAACTGGACGATCTCCGTCGGGCAGACCGTGGCCGGCGTGGACACCGGCGAGCTGACCGCGACCCAGAACCTGGTGGTGA
GCGCGCCGCAGTTCGCGCTGGACCCGACCGCGATCATCAACCAGTACCCGCCGGCCGGCAGTACCGGGCAGTTCGGGCAG
GTGCTGCCGCACATCGTGCTCAGCGACGCGTTGCTGCCCTGGGAGCGGGCCATGGCCGGCTCGTCCGCCGCCCAGCCGTG
GCTGGCGGTACTGGTGCTCGGCGAGGATGAGATCATCGGTGGCGTCGGCGCTCCCACCCGTGCGCAGACCGCCACGGTGG
CGGACTTCCTGCGGGCCGACCCGGCCGTGCTCAAACCGGCGGTGGTGCAGGAGGGCGACGTCGCCGACACCGATCCGTGC
ACCTTCATCCAGCTGGCGACGGTGCTGTTCCCCGCGCTCGTCCCGCGGCTGACCGAGCTGCGTTTCCTGGCGCACTGCCG
CCAGTCCAACATCGCTGACAAGGCCGAGCTGGGGCTGGAGACCAACGGGCTGTTCTCGGTGGTGGTGGGCAACCGGTTCC
CGGCCGCCCCGGCCGAGGACGCGCCGGCCGAGGACGGCTCGGCGGCATGCAAGAGCATCGCGCACCTGGTGTCGCTGGAG
GGCCTCGAGACGTACCTGGTGGACCAGCCGGACTTCGGCGCCCACACGTCGGTGGCGCTGCTGTCGCTGGCCAGCTGGAC
GTTCAACACCACGGCCAACCGGCACCAGGACTTCCGCGGCCTGATGGAGAACCTGGTCGGGCAGGAGTACGACGGCAGCA
GCTACACCCCGGCGAACCTGTGGCTGCGGCTGCCGGCACCGACCGCCCCGGGCGGCGGCACCGCGGCCGGCGCGGAGGTC
AGCCGCCGGCTGGCGGACGGGTTCGTCCCGCTGGAGTACCAGCTGCGCACCGGCGAGCGGACCTTCGCCTGGTACCGCGG
GCCGTGCGCGCCGGTGCTGACCACACCGCTGGGAGCGGACACGTCGTTTCCCACCTCGGACGCGGCGCTGGTCTACGACA
GCGGGTTCGGCGTCTTCGACGCCTCGCTGGCCACCGCCTGGCAGGCCGGCCGCGCGCTGGCACTGGCGGACCGGGTGTTC
GGCCAGGCCCTGTACGCCTTCCGGACCCGCGGCCACCAGGTCACCGACCGGTTGCTGGAGCGGCTGCGCAGCGACGCCTT
CCCGGCCAGCCAGATCGCCGAGCTGCGCTCGGACACCTCCGTGCAGGACGAGTTCCTGCGCTGCCTTTCGACCGACCTGC
TGACCACCCTGGCGGCCACCGACGCCACCGACGCCACCGACGCCACCGACGCCACCGACGCCACCGACACCGCCGACACC
GCCGACACGCCCGCGGATCCGGGCGCCGCCCCGCACCCGGCCCAGGACCCGGATCCGGCCGCGGCGGTGCGCGGCTTCCT
GGCCGACCCGCGGACGCGGGAGCTGATCGCGGACGGCACCCAGGCCGACCTGCTGCCGGTGACCACCTGGCTGGCCAACC
TGGTGCTGCTCTACCCGCTGCCGTTCAACCTGCTGGTGCCCGACAGCCGGATGCTCGCCCCGGAGACGCTGCGCTTCTTC
TACCTGGACGACAACTGGCTGCGCGCGCTGACCGACGGGGCGCTGAGCATCGGCACGCAGTCCAGCCGGGACGCCGTCCT
CACCGGGATCATGGGCGGCCTGATCCACCGGGCCGCCCGGACCACGGCGCAGGCGCTGCGCGCCAGGCGGACCGGGGTCG
AACCGCCGGCCACCACGGCCACCGCCTCCACCGGGGCCGGGGCCGGGGCGGCCGGGGACAGCCTGGTCAGCGGGTTCCTG
CTGCGCTCGGCGGTGGTGTCCGGCTGGCCCAACCTCGCGGTCCGCGGCAGCCTGGCCGGCGACGACCTGCGAGTGCTGCG
GATGGACCGCCTCGCCGACGACCTGCTCCTCTGCCTGTTCCAGGGCGTCCCGGACCAGGTCGAGTTCGCCGAGCCGCAGG
AGGGCTTCCGGTTCGGCGTGGACGACGACGGCGAGCTGCCGCTACGTCAGCCGACCTCCGACGGCCCGGTGCCGATCGGT
ACCCAGCTGGCCGCCCCGTTGCCGCTGCTTCCCGACAGCCTGCGCGCCGGCGGCGACACCGTGCTGGACGTCGGTGCCGC
CGCCCGGCGGATCCAGGACGCGCTGGCGGCCGCCGGTGTCGCGGTGCCCGACTTCGGCCCGGCGGACTTCGCTCTGCAGA
TGGTGAAGTCCCCCGAGGCCATCAGGTTCACCAGCCCGACCGGCTGA

Upstream 100 bases:

>100_bases
CAGGCCTGAGCAGACCCCGCTCGCCCGCCAGCGCCGCGAGGACCCGTTCGTGCGGCAGCCCTGAACGAGCTGAACCTGAA
CGAGCTGAAACGGAGCGTCC

Downstream 100 bases:

>100_bases
GCACCCCGACCGACCTGACGTTCCCGACGGACCTGACCACCTCGACGGACAAGGATCCGCGCATGCCCGGTCTGCCCCTC
GCCGTGCCCGTCACGCTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 788; Mature: 787

Protein sequence:

>788_residues
MATSETTDIPVGDLRFYDNYVPALAAGNWTISVGQTVAGVDTGELTATQNLVVSAPQFALDPTAIINQYPPAGSTGQFGQ
VLPHIVLSDALLPWERAMAGSSAAQPWLAVLVLGEDEIIGGVGAPTRAQTATVADFLRADPAVLKPAVVQEGDVADTDPC
TFIQLATVLFPALVPRLTELRFLAHCRQSNIADKAELGLETNGLFSVVVGNRFPAAPAEDAPAEDGSAACKSIAHLVSLE
GLETYLVDQPDFGAHTSVALLSLASWTFNTTANRHQDFRGLMENLVGQEYDGSSYTPANLWLRLPAPTAPGGGTAAGAEV
SRRLADGFVPLEYQLRTGERTFAWYRGPCAPVLTTPLGADTSFPTSDAALVYDSGFGVFDASLATAWQAGRALALADRVF
GQALYAFRTRGHQVTDRLLERLRSDAFPASQIAELRSDTSVQDEFLRCLSTDLLTTLAATDATDATDATDATDATDTADT
ADTPADPGAAPHPAQDPDPAAAVRGFLADPRTRELIADGTQADLLPVTTWLANLVLLYPLPFNLLVPDSRMLAPETLRFF
YLDDNWLRALTDGALSIGTQSSRDAVLTGIMGGLIHRAARTTAQALRARRTGVEPPATTATASTGAGAGAAGDSLVSGFL
LRSAVVSGWPNLAVRGSLAGDDLRVLRMDRLADDLLLCLFQGVPDQVEFAEPQEGFRFGVDDDGELPLRQPTSDGPVPIG
TQLAAPLPLLPDSLRAGGDTVLDVGAAARRIQDALAAAGVAVPDFGPADFALQMVKSPEAIRFTSPTG

Sequences:

>Translated_788_residues
MATSETTDIPVGDLRFYDNYVPALAAGNWTISVGQTVAGVDTGELTATQNLVVSAPQFALDPTAIINQYPPAGSTGQFGQ
VLPHIVLSDALLPWERAMAGSSAAQPWLAVLVLGEDEIIGGVGAPTRAQTATVADFLRADPAVLKPAVVQEGDVADTDPC
TFIQLATVLFPALVPRLTELRFLAHCRQSNIADKAELGLETNGLFSVVVGNRFPAAPAEDAPAEDGSAACKSIAHLVSLE
GLETYLVDQPDFGAHTSVALLSLASWTFNTTANRHQDFRGLMENLVGQEYDGSSYTPANLWLRLPAPTAPGGGTAAGAEV
SRRLADGFVPLEYQLRTGERTFAWYRGPCAPVLTTPLGADTSFPTSDAALVYDSGFGVFDASLATAWQAGRALALADRVF
GQALYAFRTRGHQVTDRLLERLRSDAFPASQIAELRSDTSVQDEFLRCLSTDLLTTLAATDATDATDATDATDATDTADT
ADTPADPGAAPHPAQDPDPAAAVRGFLADPRTRELIADGTQADLLPVTTWLANLVLLYPLPFNLLVPDSRMLAPETLRFF
YLDDNWLRALTDGALSIGTQSSRDAVLTGIMGGLIHRAARTTAQALRARRTGVEPPATTATASTGAGAGAAGDSLVSGFL
LRSAVVSGWPNLAVRGSLAGDDLRVLRMDRLADDLLLCLFQGVPDQVEFAEPQEGFRFGVDDDGELPLRQPTSDGPVPIG
TQLAAPLPLLPDSLRAGGDTVLDVGAAARRIQDALAAAGVAVPDFGPADFALQMVKSPEAIRFTSPTG
>Mature_787_residues
ATSETTDIPVGDLRFYDNYVPALAAGNWTISVGQTVAGVDTGELTATQNLVVSAPQFALDPTAIINQYPPAGSTGQFGQV
LPHIVLSDALLPWERAMAGSSAAQPWLAVLVLGEDEIIGGVGAPTRAQTATVADFLRADPAVLKPAVVQEGDVADTDPCT
FIQLATVLFPALVPRLTELRFLAHCRQSNIADKAELGLETNGLFSVVVGNRFPAAPAEDAPAEDGSAACKSIAHLVSLEG
LETYLVDQPDFGAHTSVALLSLASWTFNTTANRHQDFRGLMENLVGQEYDGSSYTPANLWLRLPAPTAPGGGTAAGAEVS
RRLADGFVPLEYQLRTGERTFAWYRGPCAPVLTTPLGADTSFPTSDAALVYDSGFGVFDASLATAWQAGRALALADRVFG
QALYAFRTRGHQVTDRLLERLRSDAFPASQIAELRSDTSVQDEFLRCLSTDLLTTLAATDATDATDATDATDATDTADTA
DTPADPGAAPHPAQDPDPAAAVRGFLADPRTRELIADGTQADLLPVTTWLANLVLLYPLPFNLLVPDSRMLAPETLRFFY
LDDNWLRALTDGALSIGTQSSRDAVLTGIMGGLIHRAARTTAQALRARRTGVEPPATTATASTGAGAGAAGDSLVSGFLL
RSAVVSGWPNLAVRGSLAGDDLRVLRMDRLADDLLLCLFQGVPDQVEFAEPQEGFRFGVDDDGELPLRQPTSDGPVPIGT
QLAAPLPLLPDSLRAGGDTVLDVGAAARRIQDALAAAGVAVPDFGPADFALQMVKSPEAIRFTSPTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82836; Mature: 82704

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSETTDIPVGDLRFYDNYVPALAAGNWTISVGQTVAGVDTGELTATQNLVVSAPQFAL
CCCCCCCCCCCCHHHHHHCCCCCEECCCEEEECCCEEECCCCCCCEECCCEEEECCCHHC
DPTAIINQYPPAGSTGQFGQVLPHIVLSDALLPWERAMAGSSAAQPWLAVLVLGEDEIIG
CCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEEECCCCEEC
GVGAPTRAQTATVADFLRADPAVLKPAVVQEGDVADTDPCTFIQLATVLFPALVPRLTEL
CCCCCCCCHHHHHHHHHHCCHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RFLAHCRQSNIADKAELGLETNGLFSVVVGNRFPAAPAEDAPAEDGSAACKSIAHLVSLE
HHHHHHHHCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GLETYLVDQPDFGAHTSVALLSLASWTFNTTANRHQDFRGLMENLVGQEYDGSSYTPANL
CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE
WLRLPAPTAPGGGTAAGAEVSRRLADGFVPLEYQLRTGERTFAWYRGPCAPVLTTPLGAD
EEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCHHHCCCCCCC
TSFPTSDAALVYDSGFGVFDASLATAWQAGRALALADRVFGQALYAFRTRGHQVTDRLLE
CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RLRSDAFPASQIAELRSDTSVQDEFLRCLSTDLLTTLAATDATDATDATDATDATDTADT
HHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ADTPADPGAAPHPAQDPDPAAAVRGFLADPRTRELIADGTQADLLPVTTWLANLVLLYPL
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PFNLLVPDSRMLAPETLRFFYLDDNWLRALTDGALSIGTQSSRDAVLTGIMGGLIHRAAR
CCEEECCCCCCCCCCEEEEEEECCHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
TTAQALRARRTGVEPPATTATASTGAGAGAAGDSLVSGFLLRSAVVSGWPNLAVRGSLAG
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCC
DDLRVLRMDRLADDLLLCLFQGVPDQVEFAEPQEGFRFGVDDDGELPLRQPTSDGPVPIG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
TQLAAPLPLLPDSLRAGGDTVLDVGAAARRIQDALAAAGVAVPDFGPADFALQMVKSPEA
CHHCCCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCE
IRFTSPTG
EEECCCCC
>Mature Secondary Structure 
ATSETTDIPVGDLRFYDNYVPALAAGNWTISVGQTVAGVDTGELTATQNLVVSAPQFAL
CCCCCCCCCCCHHHHHHCCCCCEECCCEEEECCCEEECCCCCCCEECCCEEEECCCHHC
DPTAIINQYPPAGSTGQFGQVLPHIVLSDALLPWERAMAGSSAAQPWLAVLVLGEDEIIG
CCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEEECCCCEEC
GVGAPTRAQTATVADFLRADPAVLKPAVVQEGDVADTDPCTFIQLATVLFPALVPRLTEL
CCCCCCCCHHHHHHHHHHCCHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RFLAHCRQSNIADKAELGLETNGLFSVVVGNRFPAAPAEDAPAEDGSAACKSIAHLVSLE
HHHHHHHHCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GLETYLVDQPDFGAHTSVALLSLASWTFNTTANRHQDFRGLMENLVGQEYDGSSYTPANL
CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE
WLRLPAPTAPGGGTAAGAEVSRRLADGFVPLEYQLRTGERTFAWYRGPCAPVLTTPLGAD
EEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCHHHCCCCCCC
TSFPTSDAALVYDSGFGVFDASLATAWQAGRALALADRVFGQALYAFRTRGHQVTDRLLE
CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RLRSDAFPASQIAELRSDTSVQDEFLRCLSTDLLTTLAATDATDATDATDATDATDTADT
HHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ADTPADPGAAPHPAQDPDPAAAVRGFLADPRTRELIADGTQADLLPVTTWLANLVLLYPL
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PFNLLVPDSRMLAPETLRFFYLDDNWLRALTDGALSIGTQSSRDAVLTGIMGGLIHRAAR
CCEEECCCCCCCCCCEEEEEEECCHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
TTAQALRARRTGVEPPATTATASTGAGAGAAGDSLVSGFLLRSAVVSGWPNLAVRGSLAG
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCC
DDLRVLRMDRLADDLLLCLFQGVPDQVEFAEPQEGFRFGVDDDGELPLRQPTSDGPVPIG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
TQLAAPLPLLPDSLRAGGDTVLDVGAAARRIQDALAAAGVAVPDFGPADFALQMVKSPEA
CHHCCCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCE
IRFTSPTG
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA