| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pckG [H]
Identifier: 158316160
GI number: 158316160
Start: 5227800
End: 5229218
Strand: Reverse
Name: pckG [H]
Synonym: Franean1_4382
Alternate gene names: 158316160
Gene position: 5229218-5227800 (Counterclockwise)
Preceding gene: 158316164
Following gene: 158316159
Centisome position: 58.22
GC content: 68.08
Gene sequence:
>1419_bases ATGCCCGTCACGATCCCGGGCCTACAGCCGACGCCGACGACACACCCGGCACTGTTGGAGTGGGTCGCCACGATCGCCGA CCTCACCCGGCCCGACCGGGTTCACTGGTGCGACGGCAGCGACGCCGAGTACGACCAGCTCTGCGCGGAGCTCGTCGACA AGGGCACGTTCCTCCGTCTCGCCGAGGACAAGCGGCCCGGCAGCTACTACGCCGCGAGCGACCCCAGCGACGTCGCCCGC GTCGAGGACCGCACCTTCATCTGCTCGAGGAGCCAGGACGACGCCGGTCCGACGAACAACTGGACCGACCCGGACGAGAT GCGCATCACCCTGCGGGGCCTGTTCGCGGGTTGCATGCGGGGCCGCACCATGTACGTCGTCCCGTTCTGCATGGGATCGC TAGGCTCACCGATCTCCGCACTCGGCGTCGAGATCACCGACTCGGCCTACGTCGCGGTCTCGATGCGTGTAATGACCCGA ATGGGCCAACCGGCACTCGACCAGCTCGGACAGGACGGCTTCTTCGTCCCCGCCGTGCACAGCGTCGGCGCGCCGCGCCA GCCCGAGCAACCCGACGTCGCCTGGCCCTGCAACGCCACCAAGTACATCGTCCACTTCCCCGAGACACGAGAAATCTGGA GCTACGGCTCCGGCTACGGCGGCAACGCCCTGCTCGGCAAGAAGTACTACGCGCTACGGATCGCCTCGGTGATGGCCCGC GACGACGGCTGGCTCGCCGAGCACATGCTGATCCTCAAGCTCACCGGACCCGACGGGAACACCCATTACATCGCGGCCGG CTTTCCGAGCGCCTGCGGCAAAACCAACCTCGCCATGCTCGTCCCGACCATCCCCGGCTGGAAGGTCGAGACCATCGGGG ACGACATCGCCTGGATGCGCTTCGGAGACGACGGACGGCTCTACGCCGTCAACCCCGAGGCCGGCTTCTTCGGCGTCGCG CCGGGCACCGGCCGGACGACCAACCCCAACGCCATCGACACGATCCACAGCAATGCGATCTTTACGAATGTCGCGCGCAC CGATGACGGAGACGTGTGGTGGGAAGGGCTGACCAAGGAACCCCCGGCACATCTCATCGACTGGCAGGGCCGCGACTGGA CACCACAGTCCGCGACGCCGGCCGCGCATCCCAACGCCCGTTTCACCGCCCCCGCCAGCCAATGCCCGACGATCGCTGCG GAATGGGCCGGCCCGGCGGGCGTTCCGATCTCCGTTGACTGTGCCGCCTGGGAACACGAAAACCGACACGATCCGTCGAT ACTTCACCGACCTCGGCCCCCGCATGCCCGACGCTCTCTGGGTCGAACTCGCGGCCCTCGCCGACCGGCTGCGCTGACAC CGTCTCCCACGCCTCACACCCTCCGTGAGCCAACGGGTTCGGCCGCCGCCACAGCCTGA
Upstream 100 bases:
>100_bases CGACGACATGTTGACGATCTTTAGGGTCGATAACCTGACAACTTCGTCAGATAGACGAGGTACAGTTCAACCATCCGACA GTCTGTCGAAGGAGTGGGAG
Downstream 100 bases:
>100_bases CAGCAATGCTGCCGACCGACGCCGTCCACACCCCTGCCCCCGGTGCGCCTAGCTAGCTGTGTCCTGTCGGCAGCATTGGT TTGGCCACGCCGTCTTCCAT
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MPVTIPGLQPTPTTHPALLEWVATIADLTRPDRVHWCDGSDAEYDQLCAELVDKGTFLRLAEDKRPGSYYAASDPSDVAR VEDRTFICSRSQDDAGPTNNWTDPDEMRITLRGLFAGCMRGRTMYVVPFCMGSLGSPISALGVEITDSAYVAVSMRVMTR MGQPALDQLGQDGFFVPAVHSVGAPRQPEQPDVAWPCNATKYIVHFPETREIWSYGSGYGGNALLGKKYYALRIASVMAR DDGWLAEHMLILKLTGPDGNTHYIAAGFPSACGKTNLAMLVPTIPGWKVETIGDDIAWMRFGDDGRLYAVNPEAGFFGVA PGTGRTTNPNAIDTIHSNAIFTNVARTDDGDVWWEGLTKEPPAHLIDWQGRDWTPQSATPAAHPNARFTAPASQCPTIAA EWAGPAGVPISVDCAAWEHENRHDPSILHRPRPPHARRSLGRTRGPRRPAALTPSPTPHTLREPTGSAAATA
Sequences:
>Translated_472_residues MPVTIPGLQPTPTTHPALLEWVATIADLTRPDRVHWCDGSDAEYDQLCAELVDKGTFLRLAEDKRPGSYYAASDPSDVAR VEDRTFICSRSQDDAGPTNNWTDPDEMRITLRGLFAGCMRGRTMYVVPFCMGSLGSPISALGVEITDSAYVAVSMRVMTR MGQPALDQLGQDGFFVPAVHSVGAPRQPEQPDVAWPCNATKYIVHFPETREIWSYGSGYGGNALLGKKYYALRIASVMAR DDGWLAEHMLILKLTGPDGNTHYIAAGFPSACGKTNLAMLVPTIPGWKVETIGDDIAWMRFGDDGRLYAVNPEAGFFGVA PGTGRTTNPNAIDTIHSNAIFTNVARTDDGDVWWEGLTKEPPAHLIDWQGRDWTPQSATPAAHPNARFTAPASQCPTIAA EWAGPAGVPISVDCAAWEHENRHDPSILHRPRPPHARRSLGRTRGPRRPAALTPSPTPHTLREPTGSAAATA >Mature_471_residues PVTIPGLQPTPTTHPALLEWVATIADLTRPDRVHWCDGSDAEYDQLCAELVDKGTFLRLAEDKRPGSYYAASDPSDVARV EDRTFICSRSQDDAGPTNNWTDPDEMRITLRGLFAGCMRGRTMYVVPFCMGSLGSPISALGVEITDSAYVAVSMRVMTRM GQPALDQLGQDGFFVPAVHSVGAPRQPEQPDVAWPCNATKYIVHFPETREIWSYGSGYGGNALLGKKYYALRIASVMARD DGWLAEHMLILKLTGPDGNTHYIAAGFPSACGKTNLAMLVPTIPGWKVETIGDDIAWMRFGDDGRLYAVNPEAGFFGVAP GTGRTTNPNAIDTIHSNAIFTNVARTDDGDVWWEGLTKEPPAHLIDWQGRDWTPQSATPAAHPNARFTAPASQCPTIAAE WAGPAGVPISVDCAAWEHENRHDPSILHRPRPPHARRSLGRTRGPRRPAALTPSPTPHTLREPTGSAAATA
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI187281517, Length=408, Percent_Identity=52.4509803921569, Blast_Score=434, Evalue=1e-122, Organism=Homo sapiens, GI66346721, Length=407, Percent_Identity=53.5626535626536, Blast_Score=424, Evalue=1e-119, Organism=Homo sapiens, GI66346723, Length=369, Percent_Identity=53.929539295393, Blast_Score=387, Evalue=1e-107, Organism=Caenorhabditis elegans, GI71989649, Length=422, Percent_Identity=49.7630331753554, Blast_Score=416, Evalue=1e-116, Organism=Caenorhabditis elegans, GI71989645, Length=422, Percent_Identity=49.7630331753554, Blast_Score=415, Evalue=1e-116, Organism=Caenorhabditis elegans, GI71989658, Length=422, Percent_Identity=49.7630331753554, Blast_Score=414, Evalue=1e-116, Organism=Caenorhabditis elegans, GI32564411, Length=418, Percent_Identity=50, Blast_Score=413, Evalue=1e-115, Organism=Caenorhabditis elegans, GI17555492, Length=418, Percent_Identity=50, Blast_Score=412, Evalue=1e-115, Organism=Caenorhabditis elegans, GI71989653, Length=396, Percent_Identity=51.2626262626263, Blast_Score=408, Evalue=1e-114, Organism=Caenorhabditis elegans, GI32564407, Length=325, Percent_Identity=55.6923076923077, Blast_Score=369, Evalue=1e-102, Organism=Caenorhabditis elegans, GI32564409, Length=171, Percent_Identity=56.7251461988304, Blast_Score=202, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17540956, Length=204, Percent_Identity=31.3725490196078, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24655082, Length=409, Percent_Identity=52.5672371638142, Blast_Score=429, Evalue=1e-120, Organism=Drosophila melanogaster, GI24655085, Length=398, Percent_Identity=54.5226130653266, Blast_Score=428, Evalue=1e-120, Organism=Drosophila melanogaster, GI161077226, Length=374, Percent_Identity=54.0106951871658, Blast_Score=399, Evalue=1e-111, Organism=Drosophila melanogaster, GI24655088, Length=310, Percent_Identity=59.0322580645161, Blast_Score=368, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 51270; Mature: 51139
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00505 PEPCK_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTIPGLQPTPTTHPALLEWVATIADLTRPDRVHWCDGSDAEYDQLCAELVDKGTFLRL CCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEE AEDKRPGSYYAASDPSDVARVEDRTFICSRSQDDAGPTNNWTDPDEMRITLRGLFAGCMR ECCCCCCCEECCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHEEHHHHHHHHHHC GRTMYVVPFCMGSLGSPISALGVEITDSAYVAVSMRVMTRMGQPALDQLGQDGFFVPAVH CCEEEEEEEHHCCCCCCHHHHCEEECCCEEEEHHHHHHHHCCCHHHHHCCCCCEEEEEHH SVGAPRQPEQPDVAWPCNATKYIVHFPETREIWSYGSGYGGNALLGKKYYALRIASVMAR HCCCCCCCCCCCEECCCCCCEEEEECCCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHC DDGWLAEHMLILKLTGPDGNTHYIAAGFPSACGKTNLAMLVPTIPGWKVETIGDDIAWMR CCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEE FGDDGRLYAVNPEAGFFGVAPGTGRTTNPNAIDTIHSNAIFTNVARTDDGDVWWEGLTKE ECCCCEEEEECCCCCEEECCCCCCCCCCCCHHHEECCCEEEEEECCCCCCCEEECCCCCC PPAHLIDWQGRDWTPQSATPAAHPNARFTAPASQCPTIAAEWAGPAGVPISVDCAAWEHE CCCCEEECCCCCCCCCCCCCCCCCCCEEECCHHHCCCEEECCCCCCCCEEEEEEECCCCC NRHDPSILHRPRPPHARRSLGRTRGPRRPAALTPSPTPHTLREPTGSAAATA CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PVTIPGLQPTPTTHPALLEWVATIADLTRPDRVHWCDGSDAEYDQLCAELVDKGTFLRL CEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEE AEDKRPGSYYAASDPSDVARVEDRTFICSRSQDDAGPTNNWTDPDEMRITLRGLFAGCMR ECCCCCCCEECCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHEEHHHHHHHHHHC GRTMYVVPFCMGSLGSPISALGVEITDSAYVAVSMRVMTRMGQPALDQLGQDGFFVPAVH CCEEEEEEEHHCCCCCCHHHHCEEECCCEEEEHHHHHHHHCCCHHHHHCCCCCEEEEEHH SVGAPRQPEQPDVAWPCNATKYIVHFPETREIWSYGSGYGGNALLGKKYYALRIASVMAR HCCCCCCCCCCCEECCCCCCEEEEECCCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHC DDGWLAEHMLILKLTGPDGNTHYIAAGFPSACGKTNLAMLVPTIPGWKVETIGDDIAWMR CCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEE FGDDGRLYAVNPEAGFFGVAPGTGRTTNPNAIDTIHSNAIFTNVARTDDGDVWWEGLTKE ECCCCEEEEECCCCCEEECCCCCCCCCCCCHHHEECCCEEEEEECCCCCCCEEECCCCCC PPAHLIDWQGRDWTPQSATPAAHPNARFTAPASQCPTIAAEWAGPAGVPISVDCAAWEHE CCCCEEECCCCCCCCCCCCCCCCCCCEEECCHHHCCCEEECCCCCCCCEEEEEEECCCCC NRHDPSILHRPRPPHARRSLGRTRGPRRPAALTPSPTPHTLREPTGSAAATA CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA