| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is atsA [H]
Identifier: 158316140
GI number: 158316140
Start: 5202607
End: 5204484
Strand: Reverse
Name: atsA [H]
Synonym: Franean1_4358
Alternate gene names: 158316140
Gene position: 5204484-5202607 (Counterclockwise)
Preceding gene: 158316141
Following gene: 158316138
Centisome position: 57.94
GC content: 68.69
Gene sequence:
>1878_bases GTGGGGCTCCGAAATTCGGGTTTCGGAGCCCCACACGGCCCGCTCGACCGGTGGCCCCTCGGTCTGGGATTCGAGCGCTA CTACGGGTTCCTGCAGGGCGACACCAACCACTGGACACCCAACCTGGTGTCGGACAACCAGTACATCGACCCGCCGGCAC GGCCCGAAGACGGCCACCATCTCACCGAGGATCTCGCGGACACCGCCATCCGGATGGTGACCGACCAGCAGCACGCTGCC CCCGGTAAGCCGTTCCTCCTCTACTTCTCCCTGGGCGCGATGCACGCACCCCACCAGGTCGCGCCGGAGTGGGTGGATCC CTACCGTGGACAGTTCGACCTGGGCTGGGACCGTTGGCGCGAGAACGTCTTCGCCCGTCAGGTCGAGGCCGGCGTCGTGC CGGGCGGAACCGTCCTCACCGAACGGCCGTCCTGGGTGGCGGGATGGAACGGGCTGACGCCGGACGCCCGGCGCATGCAC GCCCGGGCCCACGAGGTGTACGCAGGCTTCCTCACCCACGCCGACGCCCAGATCGGACGTCTCCTCGACGCACTCGGACG CCTCGGCGCACTCGACAACACCATCGTGCTACTGATGTCAGACAACGGCGCCAGCGCCGAGGGCGGCCAGCACGGAACCT TCAACGAGCACCGCTTCTCCTCCCGGCTCCCGGAAACGGTCGAGAACAACCTCGCCCATCTCGACGACTGGGGAGGTTCT CGCACCTACAGCCACTACTCGTGGGGATGGGCGTGGGCGGGCAACACACCGCTGCGACTGTGGAAGCGCTACACCTGGCT CGGCGGCACCCGGGTGCCGCTGGTCGTCCACTGGCCCGCCGGAATCACTGCCCGAGGGGAGAACCGCGACCAGTTCTGCC ACGCCGTCGATGTGCTGCCCACCATTCTCGACGCCTGCGGCATACCGGCACCGGAGACGGTGGATGGCGTGTCCCAGCAG CCGCTGGACGGCGCCAGCTTCACGGCGAGCTTCCACGACGCCGACGCGCCGGCCCCGCGATCCACCCAGTACTTCGAGAT TCTCGGCTCCCGCTCGATCGTCAGTGGCCGGTGGAAGGCGACCACCGACCATGTGTCGAAAGGCGTGGTCGACGAGGAGG AGCTCATGAGCGGTAGCCGTGACTTCGTCGCCGACCACTGGTCGCTGTTCGACATCGAGCAGGACTTCTCCGAGGCGGTG GACCTCTCCGCCGAGCACCCCGACGTCGTCCGCCGACTGCGGGAGCTGTGGCTCCTCGAGGCCGGGCGCAACAACGTCAT GCCGATGTCGGAGGGCCTCACCGACCGAGTCGGAGCGATCATTCCCCGGGACTACCCGATCGGCAACCGAGCCGTGTTCC GGCCGGGCGGCTCGCCGATCTCCGAGGAGGCACTCCCGATGCTGCCCTTTGGTTTCCGGATGTCCGTCGACACCGAGGTG GCACCCGAAGCCGAAGGGGTGCTCTTCGCCCTCGGAGACTGGAACGGCGGGTACGCGCTCTACGCGGTCGGGAGCATGCT CCGTTTCACATACTGCCCTGCCGGTGAGCCGGTCACGGTGGCGGCGGCGCGTGCGCTCCCCCCGGGGCTCCACCGCCTGT CCGTCGCCTTTGAGCCCGGCGGGAGCCCGGGGGGCAGGTTCACCCTCACCTGCGACGACGAGGTGCTCGGCGCTGCCACC ACGGCCGTCGCGATGCCCTTCGCCCTACAGCACGGTGGCACGCACCTCTGCCTGGGCCGCGACCGCGGTTTCCCGGTATC CGAGGACTACACGTCTCCGTTCCCGTGGAACGGAGTGATCCACAGGATGGTCGTGGAGACACCCGGGTTCGACCGGCCAG GAACCACCGAGGTACGAGCAGCTCTCCACGCGGACTGA
Upstream 100 bases:
>100_bases CCGCCACCAGGGACCCGCGCATGCCGAGCGTCGCCCTGCCCGCGCCACCACCGGTCCAGCAATACAGCCTTTGATGAGAC GGGGGAGTGATCCCGATGCT
Downstream 100 bases:
>100_bases CCAGGGCCGCGCGACCAGATCGGTTCGCGTCCGCTATACCTGGGCCGGTGGCCTGCGGGGCTTCCCCGCCGCCCACCCGG GGTGCCTGCGGCACGGGGGC
Product: sulfatase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MGLRNSGFGAPHGPLDRWPLGLGFERYYGFLQGDTNHWTPNLVSDNQYIDPPARPEDGHHLTEDLADTAIRMVTDQQHAA PGKPFLLYFSLGAMHAPHQVAPEWVDPYRGQFDLGWDRWRENVFARQVEAGVVPGGTVLTERPSWVAGWNGLTPDARRMH ARAHEVYAGFLTHADAQIGRLLDALGRLGALDNTIVLLMSDNGASAEGGQHGTFNEHRFSSRLPETVENNLAHLDDWGGS RTYSHYSWGWAWAGNTPLRLWKRYTWLGGTRVPLVVHWPAGITARGENRDQFCHAVDVLPTILDACGIPAPETVDGVSQQ PLDGASFTASFHDADAPAPRSTQYFEILGSRSIVSGRWKATTDHVSKGVVDEEELMSGSRDFVADHWSLFDIEQDFSEAV DLSAEHPDVVRRLRELWLLEAGRNNVMPMSEGLTDRVGAIIPRDYPIGNRAVFRPGGSPISEEALPMLPFGFRMSVDTEV APEAEGVLFALGDWNGGYALYAVGSMLRFTYCPAGEPVTVAAARALPPGLHRLSVAFEPGGSPGGRFTLTCDDEVLGAAT TAVAMPFALQHGGTHLCLGRDRGFPVSEDYTSPFPWNGVIHRMVVETPGFDRPGTTEVRAALHAD
Sequences:
>Translated_625_residues MGLRNSGFGAPHGPLDRWPLGLGFERYYGFLQGDTNHWTPNLVSDNQYIDPPARPEDGHHLTEDLADTAIRMVTDQQHAA PGKPFLLYFSLGAMHAPHQVAPEWVDPYRGQFDLGWDRWRENVFARQVEAGVVPGGTVLTERPSWVAGWNGLTPDARRMH ARAHEVYAGFLTHADAQIGRLLDALGRLGALDNTIVLLMSDNGASAEGGQHGTFNEHRFSSRLPETVENNLAHLDDWGGS RTYSHYSWGWAWAGNTPLRLWKRYTWLGGTRVPLVVHWPAGITARGENRDQFCHAVDVLPTILDACGIPAPETVDGVSQQ PLDGASFTASFHDADAPAPRSTQYFEILGSRSIVSGRWKATTDHVSKGVVDEEELMSGSRDFVADHWSLFDIEQDFSEAV DLSAEHPDVVRRLRELWLLEAGRNNVMPMSEGLTDRVGAIIPRDYPIGNRAVFRPGGSPISEEALPMLPFGFRMSVDTEV APEAEGVLFALGDWNGGYALYAVGSMLRFTYCPAGEPVTVAAARALPPGLHRLSVAFEPGGSPGGRFTLTCDDEVLGAAT TAVAMPFALQHGGTHLCLGRDRGFPVSEDYTSPFPWNGVIHRMVVETPGFDRPGTTEVRAALHAD >Mature_624_residues GLRNSGFGAPHGPLDRWPLGLGFERYYGFLQGDTNHWTPNLVSDNQYIDPPARPEDGHHLTEDLADTAIRMVTDQQHAAP GKPFLLYFSLGAMHAPHQVAPEWVDPYRGQFDLGWDRWRENVFARQVEAGVVPGGTVLTERPSWVAGWNGLTPDARRMHA RAHEVYAGFLTHADAQIGRLLDALGRLGALDNTIVLLMSDNGASAEGGQHGTFNEHRFSSRLPETVENNLAHLDDWGGSR TYSHYSWGWAWAGNTPLRLWKRYTWLGGTRVPLVVHWPAGITARGENRDQFCHAVDVLPTILDACGIPAPETVDGVSQQP LDGASFTASFHDADAPAPRSTQYFEILGSRSIVSGRWKATTDHVSKGVVDEEELMSGSRDFVADHWSLFDIEQDFSEAVD LSAEHPDVVRRLRELWLLEAGRNNVMPMSEGLTDRVGAIIPRDYPIGNRAVFRPGGSPISEEALPMLPFGFRMSVDTEVA PEAEGVLFALGDWNGGYALYAVGSMLRFTYCPAGEPVTVAAARALPPGLHRLSVAFEPGGSPGGRFTLTCDDEVLGAATT AVAMPFALQHGGTHLCLGRDRGFPVSEDYTSPFPWNGVIHRMVVETPGFDRPGTTEVRAALHAD
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 68465; Mature: 68334
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRNSGFGAPHGPLDRWPLGLGFERYYGFLQGDTNHWTPNLVSDNQYIDPPARPEDGHH CCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCH LTEDLADTAIRMVTDQQHAAPGKPFLLYFSLGAMHAPHQVAPEWVDPYRGQFDLGWDRWR HHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCCCCHHCCCHHCCCCCCCCCCCHHHHH ENVFARQVEAGVVPGGTVLTERPSWVAGWNGLTPDARRMHARAHEVYAGFLTHADAQIGR HHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHH LLDALGRLGALDNTIVLLMSDNGASAEGGQHGTFNEHRFSSRLPETVENNLAHLDDWGGS HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCHHHCCCCCCC RTYSHYSWGWAWAGNTPLRLWKRYTWLGGTRVPLVVHWPAGITARGENRDQFCHAVDVLP CCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCHHHHHHHHHHHH TILDACGIPAPETVDGVSQQPLDGASFTASFHDADAPAPRSTQYFEILGSRSIVSGRWKA HHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEECCCCCC TTDHVSKGVVDEEELMSGSRDFVADHWSLFDIEQDFSEAVDLSAEHPDVVRRLRELWLLE CHHHHHCCCCCHHHHHCCCCCHHHCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AGRNNVMPMSEGLTDRVGAIIPRDYPIGNRAVFRPGGSPISEEALPMLPFGFRMSVDTEV CCCCCCCCCCCCCHHHHCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCC APEAEGVLFALGDWNGGYALYAVGSMLRFTYCPAGEPVTVAAARALPPGLHRLSVAFEPG CCCCCCEEEEEECCCCCCHHEEHHHHHHEEECCCCCCEEEEEHHCCCCCCEEEEEEECCC GSPGGRFTLTCDDEVLGAATTAVAMPFALQHGGTHLCLGRDRGFPVSEDYTSPFPWNGVI CCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHE HRMVVETPGFDRPGTTEVRAALHAD EEEEEECCCCCCCCCHHHHHEECCC >Mature Secondary Structure GLRNSGFGAPHGPLDRWPLGLGFERYYGFLQGDTNHWTPNLVSDNQYIDPPARPEDGHH CCCCCCCCCCCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCH LTEDLADTAIRMVTDQQHAAPGKPFLLYFSLGAMHAPHQVAPEWVDPYRGQFDLGWDRWR HHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCCCCHHCCCHHCCCCCCCCCCCHHHHH ENVFARQVEAGVVPGGTVLTERPSWVAGWNGLTPDARRMHARAHEVYAGFLTHADAQIGR HHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHH LLDALGRLGALDNTIVLLMSDNGASAEGGQHGTFNEHRFSSRLPETVENNLAHLDDWGGS HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCHHHCCCCCCC RTYSHYSWGWAWAGNTPLRLWKRYTWLGGTRVPLVVHWPAGITARGENRDQFCHAVDVLP CCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCHHHHHHHHHHHH TILDACGIPAPETVDGVSQQPLDGASFTASFHDADAPAPRSTQYFEILGSRSIVSGRWKA HHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEECCCCCC TTDHVSKGVVDEEELMSGSRDFVADHWSLFDIEQDFSEAVDLSAEHPDVVRRLRELWLLE CHHHHHCCCCCHHHHHCCCCCHHHCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AGRNNVMPMSEGLTDRVGAIIPRDYPIGNRAVFRPGGSPISEEALPMLPFGFRMSVDTEV CCCCCCCCCCCCCHHHHCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCC APEAEGVLFALGDWNGGYALYAVGSMLRFTYCPAGEPVTVAAARALPPGLHRLSVAFEPG CCCCCCEEEEEECCCCCCHHEEHHHHHHEEECCCCCCEEEEEHHCCCCCCEEEEEEECCC GSPGGRFTLTCDDEVLGAATTAVAMPFALQHGGTHLCLGRDRGFPVSEDYTSPFPWNGVI CCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHE HRMVVETPGFDRPGTTEVRAALHAD EEEEEECCCCCCCCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7744061; 10984043 [H]