| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316124
Identifier: 158316124
GI number: 158316124
Start: 5185616
End: 5186164
Strand: Reverse
Name: 158316124
Synonym: Franean1_4342
Alternate gene names: NA
Gene position: 5186164-5185616 (Counterclockwise)
Preceding gene: 158316125
Following gene: 158316121
Centisome position: 57.74
GC content: 75.41
Gene sequence:
>549_bases ATGAGCCCGGTACCGCTGCGTGTCCAGACGCCCTCCGCCCAGGCGACGTCCGCCCAGGTGATACTGCCCGGCGAACGACT GGCCGTCGTCGGGCGTGGGCGGGACGCGGACGTCGTCGTCGCCGACAGCCGGGTGTCGCGGCGACACGTCGAGCTCGAAC CCAGCGGGGACGGGTGGACGGTGCGTGACCTCAGCGCCAACGGCATATGGTGCGACGGGCGGCGGACCGCGACCGTGCGC ATCCAGTTCGATGAGGTCCGATTGCGGCTCGGCGCGGCCGACGGCCCGGAACTGGTGCTCGTCCCGCAACGGGCGGCCGG ACCACCAGCCCAGCCCGGACCGGGTCTCGACGTCGGCGACATGGCGACCCGGTTGGCCGTCGGCGGCCCGCTGGCACCCG CGCGGCCACGCCCGGTGGGACCCGGACCCGCCGCCGTCCCGGCCCCGGTCAAGACGGCAGCGCCACCGCGCTGGGCTCGC GCGTTCCCCACCCTGGCGTGGCTGGCGGCAGCCGCCTTCGCCGTCGGCGCACTGATCGCGCTTACCTGA
Upstream 100 bases:
>100_bases TCGTCGTCCAGGACGACACCGTGTTCACCGCCTGACCTCGAACAACCGGCCCTGACCGGCCCGACCGGCCCGACCTGCCG ACCGAAGAAATGGGGAACCG
Downstream 100 bases:
>100_bases TCAACTCTGACAGGGCGTCAGCTGGGTGCGGGCGTCAGCCTCGACCCGTAAACCGCGGTTTCGAGGTCCGGCGTCGCGTC CACGCCCCCGCGACCCTTGT
Product: FHA domain-containing protein
Products: NA
Alternate protein names: Forkhead-Associated Protein
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSPVPLRVQTPSAQATSAQVILPGERLAVVGRGRDADVVVADSRVSRRHVELEPSGDGWTVRDLSANGIWCDGRRTATVR IQFDEVRLRLGAADGPELVLVPQRAAGPPAQPGPGLDVGDMATRLAVGGPLAPARPRPVGPGPAAVPAPVKTAAPPRWAR AFPTLAWLAAAAFAVGALIALT
Sequences:
>Translated_182_residues MSPVPLRVQTPSAQATSAQVILPGERLAVVGRGRDADVVVADSRVSRRHVELEPSGDGWTVRDLSANGIWCDGRRTATVR IQFDEVRLRLGAADGPELVLVPQRAAGPPAQPGPGLDVGDMATRLAVGGPLAPARPRPVGPGPAAVPAPVKTAAPPRWAR AFPTLAWLAAAAFAVGALIALT >Mature_181_residues SPVPLRVQTPSAQATSAQVILPGERLAVVGRGRDADVVVADSRVSRRHVELEPSGDGWTVRDLSANGIWCDGRRTATVRI QFDEVRLRLGAADGPELVLVPQRAAGPPAQPGPGLDVGDMATRLAVGGPLAPARPRPVGPGPAAVPAPVKTAAPPRWARA FPTLAWLAAAAFAVGALIALT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18785; Mature: 18654
Theoretical pI: Translated: 11.60; Mature: 11.60
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPVPLRVQTPSAQATSAQVILPGERLAVVGRGRDADVVVADSRVSRRHVELEPSGDGWT CCCCCEEEECCCCCCCCEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEECCCCCCEE VRDLSANGIWCDGRRTATVRIQFDEVRLRLGAADGPELVLVPQRAAGPPAQPGPGLDVGD EEEECCCCEEECCCEEEEEEEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCHHH MATRLAVGGPLAPARPRPVGPGPAAVPAPVKTAAPPRWARAFPTLAWLAAAAFAVGALIA HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEE LT CC >Mature Secondary Structure SPVPLRVQTPSAQATSAQVILPGERLAVVGRGRDADVVVADSRVSRRHVELEPSGDGWT CCCCEEEECCCCCCCCEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEECCCCCCEE VRDLSANGIWCDGRRTATVRIQFDEVRLRLGAADGPELVLVPQRAAGPPAQPGPGLDVGD EEEECCCCEEECCCEEEEEEEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCHHH MATRLAVGGPLAPARPRPVGPGPAAVPAPVKTAAPPRWARAFPTLAWLAAAAFAVGALIA HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEE LT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA