| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316034
Identifier: 158316034
GI number: 158316034
Start: 5068674
End: 5072948
Strand: Reverse
Name: 158316034
Synonym: Franean1_4252
Alternate gene names: NA
Gene position: 5072948-5068674 (Counterclockwise)
Preceding gene: 158316036
Following gene: 158316033
Centisome position: 56.48
GC content: 70.48
Gene sequence:
>4275_bases ATGGGCAGGATTTTTGTCAGCTTTCACGCGGCCGAGGGCGGGGCGCTGGCTGACCGGGTAGTGCGTGCGCTCGAAGCGGC CGGCTACACCGACTACTACAACTATCGGGTGCCGGGGCACCGGACTGCTCCGGGGGCGGCATGGGCGCCGGACATCAGGA GAAACCTTCTGGTGAGCGAGGCGTTCATCGCCATCACGACCCCGAAAGCGCTTGACGAGTGGTGTTCAACCGAGGTCGCG ATCTTCCGTGAACGCAAGCCGCGTGCCCCGTTCCTCGAGATCGTCGTGGGCGAGGCCTCCCGACGTGCGCTGACCGGAGC CCTGCAGGGAATCCGGGTCCGCCCGGACAACGAGGAGTCCGTCGCGGCCGCGTTAGCCACGGTGATCGCGTTCCTGCAGG CGCGCGGGGTCGGGACCGGGCCCGGTCGAACCTCGCCCTACCCCGGCCTTGCGGCATTCGGGGAGCGGGACGCCGCGGTC TTCTTCGGCCGGGATGACGACATCGGCAGGCTGGCGGCCGCCATCGAGCCGCGTGCGCACGGCGCCATGGCGGTCGTCGG CCCTTCCGGGGTTGGAAAGTCGTCGCTGGTTCTGGCCGGCCTGGTGCCTCGGCTGCGTGGTATGCCCTCGTCCGCCGCAC GGACAGCGCGCTGGCATGTCCTCGGCCCGGTCACGCCGAGCACGGGCGCGGTTCGCGGGCTCGCCGAGGCGCTGTCGATC CAGCGCGCCGAGGTCGGCCTGCCCCCGGTCCCCGCGGCGACACTCGAGGCGCGCATCCGCGCCGACCGCGTTGCTCTGGC CGCCATGCTGGACGAACTCATAGCCGCGGCGTCCGCCCGACCGCCCGGCGGACAGATACGTGTGCTCATTGTCCTCGACC AGGCCGAGGAGCTCGTGTTGGCGGCATCCGAGCCGGTCCGGGGGCGGCCCGAGAAAAGGCCGGATGAGCGGTGGAACGAG TCGTCCGGCGGACGGTCCGACGACCTGTCAGTCCAGCAGGCGGAGGCCGTGGTGCTGACCGAGGCGCTCGTCGAGGCTTC GTACCGCAACGCCTGGCTGGTATACACGGTGCGGTCCGACTATCTCGACGACCTGCTTCGCGGGACGACGTTTCGTGCGC TGATGCAGCAGGCCCATCTGGTCCGTCCTCTGGATCGGCGCGAGTTGCTCGCTGTGGTCAGTGAGCCCGTCCATCAGCTG GGCTGGTCGTATGAGACGGATGCGCTGAGCGCGATCGTCGAGGACGGTGCCCGCGGCTCGCTACCAATGCTGGCGTACGC CTTGGCGCGACTGTGGGACCGGGTCAACCCGGGCGGGGACCGGGAGCCGCGCGCGATCCGCCGGGGCGAGTACGACCGCG CCGGCCGGGTGCAGGACGTGCTGCGCGAACAGGCCGAAGCGGCGCTGGCGGAGGCGCTCGAGCAGATCGGCCGGGCCGTC CTCGGCCGTTCAGGCGCGACGGTCGACCGGCGCGCCGCAGAGCATCGCATGCTCGACCTCCTCAGCAGGCTGGCGTCGGT CGGCCCGGACCGGGGCTTTACCCGGCGGCCGTTGATGATCACGGAAATTGGCGACGAGGAGCTTGGACTGCTAAGGCCGT TCGTCGAGCGCCGAGTGCTGACCACCACCCGGTCGCTGTTTGTCGCCCAGGGCACGGAACAACGGGCTGGGGAGCTCGCG GAACGGGTCCTCGGCATCGCGGACGTCGGCGACAACGCTCTGGAGGTCGCACACGAGAGCCTGTTCGGCGACTGGCCGCG GCTGCGTGCCCACCTCGGTCGGCAGCGTGAGGCCCTGCGGGCCCGCGGTGAGCTGGAGGAACTCGCGGCCGCCTGGCTGG CGGGTGGTAAGCGGGACGAGGACCTCATAGGCCAGTCCCGTGTCCAGTTCCTGCTCGCTGACCTCCTGCCGTCCCGGGAC GTGCGGGGCGATCAGACGGTGACGGCGTGGGGATGGCCGAACCTGGCGGACGCACTGGTCACGGCTGGCATCTCCGCTGA CGCCGTCCAGCTGGCTGGGCTGTCAATCCAGCGGGTTCTGGGCCGGCTCGTCCAGGAGGCGGTGCTGCTGGAGCGGCCGG AGGACGGCCTGCGTCTTCTAGTCGGCGCGGGAACCAACTCGGACCCCGAGACACTGGCTGTTCAGCTGTCCGCGCCGAGC CTCGAGGGCTGGCGGGCAGCGGTGCACCGAGCCGAGGCTCAGCTGCGGAGCACCAGGCTGCTGACAGACCGTTCCGTCGG CCGTTCCGCGGGTATGTGGGGAGTCGCCTGGTCGCCGGACGGATCGCGGGTGGCCACGGGCTCACGCGATGGCGTCATCC GGATCTGGGATCTGAGCGCCGGCGACCTCGTCAACGCGTTCGCGCACGGCGAGGACCAGATTGAGCAGGTCGATGGATGG GTGCGTTCGGTTGCCTGGTCACCGTCCGCGGATCTGGTGGCATCCGCCTCGACCGACGAGACGACACGAGTGTGGTCACT TGACACGGGGCGAGAGGTCCGGTCGTTCCGCCTGCCGGACCGTCCCTGGGCAGTCCGGTTCAGCCCGGCCGGCGACCAGG TGCTGACCGCCTGTGCCTCGGGCCATGCGGTGCTCTGGTCCACCGAGCGGCGCAGTCGTCGCCCGGACTACGAGCTTCTC AGCAAGCCATCCGAGGCGGCCACGGCGGAGGCCGGTCCGACCGAGGGGGGCCAGTCTGATGGAGGCTCTCGGGGTGGGGG CCCTCGGAGCCGGTCGGACCCGGAACGCGGCATCCGAATCTGGGACGCCGACATCGTGACCGGGGACGTCACGCGGATCG CGACGGCCTGCGAGGACGGGGTGGTCGATCTGTGGACCCTGCCCTCGGATCGGGACGCCGATGTCCCGGCGCCCCGCCGC ATCGCGGCGCATCCCGGTGTAACCGTTCGGTCTGTGCGCTTCAGCCCGGGCGGCGGGCGGATTGCGACCGCGGGGCAGGA CAACATCATCAAGGTTTTCGAGATCGAAGGCGGAGTCGAGCTGCGCCGGATGTCCGGCCACACGGACCAGGTCCGCAGGG TCGCGTGGTCACCGCTCGGCAATCGGGTTGCCAGCGCGTCGGCCGATACCTCCATCGGAGTGTGGGACGTCCATTCCGGC CGGAGGGTCCTCACTCTGCGCGGTCACCGGCAGGGCGTCTGCGACGTGGCCTGGTCCGCCGCCGGCGACCAGCTGATCTC CGTCTCGGACGACGGGACCGCTCGGGTGTGGAAAATCGGCGCGGTCGAGACGGCGTTGGTCCTGGTCGGGGCGCCGGCCA GTGCGATGGACCGGTCACGGGTCACGGGTGAAATCGCGGTGGCCGTTGCCGCGGGCCCGACCAGCGCTACCGGCAACAGT TTTGATGTCGTCGTGCTGCGGCCGGACGGCACGCGGACGCGGACGCTCTCCGCCGCGCACCGGAACACGATTCGGTCTGT GTCGTGGTCTCCGTCAGGCACCCGGCTGCTGACCGCGTCACGGGACAACACCGCCCGGATCTGGCGCGTCGACAACGTGG ACTACGCGCTGGAAAACACGCTGTACGCCCGCGAGGGCGTGGAGGACGCCCGGTGGTCGCCGGACGGCGTCGAACTGGTC ACCGCTGCCCGCGACCGGGTGGTCCGTAGATACCGTGCCGACGGTGAGTGGCTCGACCGGGACGAGCGGCGCCCGCACCC GAACTTCCTGCGAGCGGTGGCATGGCACCCGAGCCGTCCCGAGTTCGCATTGGCGGCGGAGGACAACCGGCTCACCATCA ACACCGCGGAGGCGACCGTGGACGAGCATCGCACTGACAAGGTGCTCACCTCCGTTGCCTGGAGCCCGACCGGGGAGAAG CTCGCCCTTGGCGCGACAGACGGCACGGTGCTGGTGCTCGGCGCCGCGGACGGAAGGATAGCCGGGGAGCTGCACCGACT CGTCGGTCATGAAGGTGAGATCAGTACGGTCGACTGGTCCACGGACGGCGAGCGCATCGTCACCTCGTCCGCGGACCACA CGGCGTCGGTATGGGACTCACACACCGGAGCACGGTTGACCTCGCTGGTCGGGCATACTGGCCCGGTTGTCGGGGCGGTG TGGGCCGTCGATGACGCCAGCACCACGAACATGGTCGTCACCACCGCGTCCGCCGACGGGACGATTCGGACCTGGGACGT CTCCGATATCAGGCGGACGCCGCTCAGCGGCCTGCCGGACACGGAGCCCGGCGAGCCCTCGGCCCACGCTACGGACCAGC TGATACGCGACGCGCGCGTGCGCCTCGGTCGATAG
Upstream 100 bases:
>100_bases AGGGGGACGCACGCCACATGGTCACGCGTAGTACGGTACTGCCGCGCGGTATCGGCAGGGCCAGGCCCTGGACCGCCGTG CACGGCATACGGGGGTTGCC
Downstream 100 bases:
>100_bases GAGTGCCACCTCGTCCGCATCGTTTTTTACGGGGGAATGTTGCAGGGTTGGAATGACGCCGCGGGCGTGAGTGTTGGCTA TTTCATTTCCTACGCGGGGT
Product: WD-40 repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1424; Mature: 1423
Protein sequence:
>1424_residues MGRIFVSFHAAEGGALADRVVRALEAAGYTDYYNYRVPGHRTAPGAAWAPDIRRNLLVSEAFIAITTPKALDEWCSTEVA IFRERKPRAPFLEIVVGEASRRALTGALQGIRVRPDNEESVAAALATVIAFLQARGVGTGPGRTSPYPGLAAFGERDAAV FFGRDDDIGRLAAAIEPRAHGAMAVVGPSGVGKSSLVLAGLVPRLRGMPSSAARTARWHVLGPVTPSTGAVRGLAEALSI QRAEVGLPPVPAATLEARIRADRVALAAMLDELIAAASARPPGGQIRVLIVLDQAEELVLAASEPVRGRPEKRPDERWNE SSGGRSDDLSVQQAEAVVLTEALVEASYRNAWLVYTVRSDYLDDLLRGTTFRALMQQAHLVRPLDRRELLAVVSEPVHQL GWSYETDALSAIVEDGARGSLPMLAYALARLWDRVNPGGDREPRAIRRGEYDRAGRVQDVLREQAEAALAEALEQIGRAV LGRSGATVDRRAAEHRMLDLLSRLASVGPDRGFTRRPLMITEIGDEELGLLRPFVERRVLTTTRSLFVAQGTEQRAGELA ERVLGIADVGDNALEVAHESLFGDWPRLRAHLGRQREALRARGELEELAAAWLAGGKRDEDLIGQSRVQFLLADLLPSRD VRGDQTVTAWGWPNLADALVTAGISADAVQLAGLSIQRVLGRLVQEAVLLERPEDGLRLLVGAGTNSDPETLAVQLSAPS LEGWRAAVHRAEAQLRSTRLLTDRSVGRSAGMWGVAWSPDGSRVATGSRDGVIRIWDLSAGDLVNAFAHGEDQIEQVDGW VRSVAWSPSADLVASASTDETTRVWSLDTGREVRSFRLPDRPWAVRFSPAGDQVLTACASGHAVLWSTERRSRRPDYELL SKPSEAATAEAGPTEGGQSDGGSRGGGPRSRSDPERGIRIWDADIVTGDVTRIATACEDGVVDLWTLPSDRDADVPAPRR IAAHPGVTVRSVRFSPGGGRIATAGQDNIIKVFEIEGGVELRRMSGHTDQVRRVAWSPLGNRVASASADTSIGVWDVHSG RRVLTLRGHRQGVCDVAWSAAGDQLISVSDDGTARVWKIGAVETALVLVGAPASAMDRSRVTGEIAVAVAAGPTSATGNS FDVVVLRPDGTRTRTLSAAHRNTIRSVSWSPSGTRLLTASRDNTARIWRVDNVDYALENTLYAREGVEDARWSPDGVELV TAARDRVVRRYRADGEWLDRDERRPHPNFLRAVAWHPSRPEFALAAEDNRLTINTAEATVDEHRTDKVLTSVAWSPTGEK LALGATDGTVLVLGAADGRIAGELHRLVGHEGEISTVDWSTDGERIVTSSADHTASVWDSHTGARLTSLVGHTGPVVGAV WAVDDASTTNMVVTTASADGTIRTWDVSDIRRTPLSGLPDTEPGEPSAHATDQLIRDARVRLGR
Sequences:
>Translated_1424_residues MGRIFVSFHAAEGGALADRVVRALEAAGYTDYYNYRVPGHRTAPGAAWAPDIRRNLLVSEAFIAITTPKALDEWCSTEVA IFRERKPRAPFLEIVVGEASRRALTGALQGIRVRPDNEESVAAALATVIAFLQARGVGTGPGRTSPYPGLAAFGERDAAV FFGRDDDIGRLAAAIEPRAHGAMAVVGPSGVGKSSLVLAGLVPRLRGMPSSAARTARWHVLGPVTPSTGAVRGLAEALSI QRAEVGLPPVPAATLEARIRADRVALAAMLDELIAAASARPPGGQIRVLIVLDQAEELVLAASEPVRGRPEKRPDERWNE SSGGRSDDLSVQQAEAVVLTEALVEASYRNAWLVYTVRSDYLDDLLRGTTFRALMQQAHLVRPLDRRELLAVVSEPVHQL GWSYETDALSAIVEDGARGSLPMLAYALARLWDRVNPGGDREPRAIRRGEYDRAGRVQDVLREQAEAALAEALEQIGRAV LGRSGATVDRRAAEHRMLDLLSRLASVGPDRGFTRRPLMITEIGDEELGLLRPFVERRVLTTTRSLFVAQGTEQRAGELA ERVLGIADVGDNALEVAHESLFGDWPRLRAHLGRQREALRARGELEELAAAWLAGGKRDEDLIGQSRVQFLLADLLPSRD VRGDQTVTAWGWPNLADALVTAGISADAVQLAGLSIQRVLGRLVQEAVLLERPEDGLRLLVGAGTNSDPETLAVQLSAPS LEGWRAAVHRAEAQLRSTRLLTDRSVGRSAGMWGVAWSPDGSRVATGSRDGVIRIWDLSAGDLVNAFAHGEDQIEQVDGW VRSVAWSPSADLVASASTDETTRVWSLDTGREVRSFRLPDRPWAVRFSPAGDQVLTACASGHAVLWSTERRSRRPDYELL SKPSEAATAEAGPTEGGQSDGGSRGGGPRSRSDPERGIRIWDADIVTGDVTRIATACEDGVVDLWTLPSDRDADVPAPRR IAAHPGVTVRSVRFSPGGGRIATAGQDNIIKVFEIEGGVELRRMSGHTDQVRRVAWSPLGNRVASASADTSIGVWDVHSG RRVLTLRGHRQGVCDVAWSAAGDQLISVSDDGTARVWKIGAVETALVLVGAPASAMDRSRVTGEIAVAVAAGPTSATGNS FDVVVLRPDGTRTRTLSAAHRNTIRSVSWSPSGTRLLTASRDNTARIWRVDNVDYALENTLYAREGVEDARWSPDGVELV TAARDRVVRRYRADGEWLDRDERRPHPNFLRAVAWHPSRPEFALAAEDNRLTINTAEATVDEHRTDKVLTSVAWSPTGEK LALGATDGTVLVLGAADGRIAGELHRLVGHEGEISTVDWSTDGERIVTSSADHTASVWDSHTGARLTSLVGHTGPVVGAV WAVDDASTTNMVVTTASADGTIRTWDVSDIRRTPLSGLPDTEPGEPSAHATDQLIRDARVRLGR >Mature_1423_residues GRIFVSFHAAEGGALADRVVRALEAAGYTDYYNYRVPGHRTAPGAAWAPDIRRNLLVSEAFIAITTPKALDEWCSTEVAI FRERKPRAPFLEIVVGEASRRALTGALQGIRVRPDNEESVAAALATVIAFLQARGVGTGPGRTSPYPGLAAFGERDAAVF FGRDDDIGRLAAAIEPRAHGAMAVVGPSGVGKSSLVLAGLVPRLRGMPSSAARTARWHVLGPVTPSTGAVRGLAEALSIQ RAEVGLPPVPAATLEARIRADRVALAAMLDELIAAASARPPGGQIRVLIVLDQAEELVLAASEPVRGRPEKRPDERWNES SGGRSDDLSVQQAEAVVLTEALVEASYRNAWLVYTVRSDYLDDLLRGTTFRALMQQAHLVRPLDRRELLAVVSEPVHQLG WSYETDALSAIVEDGARGSLPMLAYALARLWDRVNPGGDREPRAIRRGEYDRAGRVQDVLREQAEAALAEALEQIGRAVL GRSGATVDRRAAEHRMLDLLSRLASVGPDRGFTRRPLMITEIGDEELGLLRPFVERRVLTTTRSLFVAQGTEQRAGELAE RVLGIADVGDNALEVAHESLFGDWPRLRAHLGRQREALRARGELEELAAAWLAGGKRDEDLIGQSRVQFLLADLLPSRDV RGDQTVTAWGWPNLADALVTAGISADAVQLAGLSIQRVLGRLVQEAVLLERPEDGLRLLVGAGTNSDPETLAVQLSAPSL EGWRAAVHRAEAQLRSTRLLTDRSVGRSAGMWGVAWSPDGSRVATGSRDGVIRIWDLSAGDLVNAFAHGEDQIEQVDGWV RSVAWSPSADLVASASTDETTRVWSLDTGREVRSFRLPDRPWAVRFSPAGDQVLTACASGHAVLWSTERRSRRPDYELLS KPSEAATAEAGPTEGGQSDGGSRGGGPRSRSDPERGIRIWDADIVTGDVTRIATACEDGVVDLWTLPSDRDADVPAPRRI AAHPGVTVRSVRFSPGGGRIATAGQDNIIKVFEIEGGVELRRMSGHTDQVRRVAWSPLGNRVASASADTSIGVWDVHSGR RVLTLRGHRQGVCDVAWSAAGDQLISVSDDGTARVWKIGAVETALVLVGAPASAMDRSRVTGEIAVAVAAGPTSATGNSF DVVVLRPDGTRTRTLSAAHRNTIRSVSWSPSGTRLLTASRDNTARIWRVDNVDYALENTLYAREGVEDARWSPDGVELVT AARDRVVRRYRADGEWLDRDERRPHPNFLRAVAWHPSRPEFALAAEDNRLTINTAEATVDEHRTDKVLTSVAWSPTGEKL ALGATDGTVLVLGAADGRIAGELHRLVGHEGEISTVDWSTDGERIVTSSADHTASVWDSHTGARLTSLVGHTGPVVGAVW AVDDASTTNMVVTTASADGTIRTWDVSDIRRTPLSGLPDTEPGEPSAHATDQLIRDARVRLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 16 WD repeats [H]
Homologues:
Organism=Homo sapiens, GI32189425, Length=384, Percent_Identity=25.78125, Blast_Score=106, Evalue=2e-22, Organism=Homo sapiens, GI21536371, Length=590, Percent_Identity=26.1016949152542, Blast_Score=103, Evalue=2e-21, Organism=Homo sapiens, GI239787754, Length=348, Percent_Identity=25.8620689655172, Blast_Score=102, Evalue=2e-21, Organism=Homo sapiens, GI4757988, Length=321, Percent_Identity=25.5451713395639, Blast_Score=102, Evalue=3e-21, Organism=Homo sapiens, GI62234461, Length=394, Percent_Identity=25.3807106598985, Blast_Score=101, Evalue=4e-21, Organism=Homo sapiens, GI239787760, Length=353, Percent_Identity=25.7790368271955, Blast_Score=101, Evalue=5e-21, Organism=Homo sapiens, GI115298668, Length=312, Percent_Identity=26.9230769230769, Blast_Score=99, Evalue=2e-20, Organism=Homo sapiens, GI4557741, Length=383, Percent_Identity=24.5430809399478, Blast_Score=99, Evalue=3e-20, Organism=Homo sapiens, GI23199987, Length=294, Percent_Identity=27.2108843537415, Blast_Score=95, Evalue=6e-19, Organism=Homo sapiens, GI16554629, Length=294, Percent_Identity=27.2108843537415, Blast_Score=94, Evalue=7e-19, Organism=Homo sapiens, GI16554627, Length=294, Percent_Identity=27.2108843537415, Blast_Score=94, Evalue=7e-19, Organism=Homo sapiens, GI19913371, Length=358, Percent_Identity=23.1843575418994, Blast_Score=94, Evalue=1e-18, Organism=Homo sapiens, GI70909324, Length=392, Percent_Identity=22.1938775510204, Blast_Score=94, Evalue=1e-18, Organism=Homo sapiens, GI24431950, Length=292, Percent_Identity=27.3972602739726, Blast_Score=92, Evalue=4e-18, Organism=Homo sapiens, GI239787764, Length=321, Percent_Identity=24.9221183800623, Blast_Score=88, Evalue=5e-17, Organism=Homo sapiens, GI26665869, Length=354, Percent_Identity=23.728813559322, Blast_Score=87, Evalue=2e-16, Organism=Homo sapiens, GI113865883, Length=282, Percent_Identity=25.177304964539, Blast_Score=84, Evalue=7e-16, Organism=Homo sapiens, GI21071067, Length=328, Percent_Identity=22.8658536585366, Blast_Score=84, Evalue=9e-16, Organism=Homo sapiens, GI7657439, Length=160, Percent_Identity=30.625, Blast_Score=80, Evalue=1e-14, Organism=Homo sapiens, GI20336270, Length=244, Percent_Identity=27.8688524590164, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI62234438, Length=169, Percent_Identity=30.1775147928994, Blast_Score=78, Evalue=7e-14, Organism=Homo sapiens, GI16445438, Length=370, Percent_Identity=23.7837837837838, Blast_Score=77, Evalue=8e-14, Organism=Homo sapiens, GI5729852, Length=244, Percent_Identity=27.8688524590164, Blast_Score=77, Evalue=1e-13, Organism=Homo sapiens, GI16445436, Length=370, Percent_Identity=23.5135135135135, Blast_Score=77, Evalue=1e-13, Organism=Homo sapiens, GI109948304, Length=263, Percent_Identity=24.7148288973384, Blast_Score=77, Evalue=1e-13, Organism=Homo sapiens, GI13376840, Length=332, Percent_Identity=23.1927710843373, Blast_Score=77, Evalue=1e-13, Organism=Homo sapiens, GI56243590, Length=244, Percent_Identity=25.8196721311475, Blast_Score=77, Evalue=1e-13, Organism=Homo sapiens, GI213021186, Length=371, Percent_Identity=24.5283018867925, Blast_Score=77, Evalue=2e-13, Organism=Homo sapiens, GI5032159, Length=371, Percent_Identity=24.5283018867925, Blast_Score=77, Evalue=2e-13, Organism=Homo sapiens, GI213021190, Length=371, Percent_Identity=24.5283018867925, Blast_Score=76, Evalue=2e-13, Organism=Homo sapiens, GI213021188, Length=371, Percent_Identity=24.5283018867925, Blast_Score=76, Evalue=2e-13, Organism=Homo sapiens, GI7657381, Length=239, Percent_Identity=27.1966527196653, Blast_Score=75, Evalue=4e-13, Organism=Homo sapiens, GI4505895, Length=278, Percent_Identity=26.2589928057554, Blast_Score=75, Evalue=6e-13, Organism=Homo sapiens, GI19913367, Length=370, Percent_Identity=23.5135135135135, Blast_Score=75, Evalue=6e-13, Organism=Homo sapiens, GI19913365, Length=370, Percent_Identity=23.5135135135135, Blast_Score=75, Evalue=6e-13, Organism=Homo sapiens, GI15150805, Length=370, Percent_Identity=23.5135135135135, Blast_Score=75, Evalue=6e-13, Organism=Homo sapiens, GI8923881, Length=209, Percent_Identity=29.1866028708134, Blast_Score=74, Evalue=8e-13, Organism=Homo sapiens, GI83779014, Length=151, Percent_Identity=32.4503311258278, Blast_Score=74, Evalue=1e-12, Organism=Homo sapiens, GI4885105, Length=395, Percent_Identity=22.2784810126582, Blast_Score=72, Evalue=4e-12, Organism=Homo sapiens, GI75709220, Length=218, Percent_Identity=26.1467889908257, Blast_Score=71, Evalue=9e-12, Organism=Homo sapiens, GI4557491, Length=218, Percent_Identity=26.1467889908257, Blast_Score=71, Evalue=9e-12, Organism=Homo sapiens, GI75709217, Length=218, Percent_Identity=26.1467889908257, Blast_Score=71, Evalue=9e-12, Organism=Homo sapiens, GI31317311, Length=268, Percent_Identity=24.6268656716418, Blast_Score=70, Evalue=2e-11, Organism=Homo sapiens, GI266457048, Length=268, Percent_Identity=24.6268656716418, Blast_Score=70, Evalue=2e-11, Organism=Homo sapiens, GI18874090, Length=211, Percent_Identity=25.5924170616114, Blast_Score=69, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17536759, Length=460, Percent_Identity=22.8260869565217, Blast_Score=90, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17554220, Length=361, Percent_Identity=24.3767313019391, Blast_Score=88, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17505895, Length=331, Percent_Identity=24.773413897281, Blast_Score=86, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17535491, Length=244, Percent_Identity=25.8196721311475, Blast_Score=80, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17552164, Length=226, Percent_Identity=24.7787610619469, Blast_Score=79, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71999874, Length=302, Percent_Identity=23.841059602649, Blast_Score=75, Evalue=2e-13, Organism=Caenorhabditis elegans, GI72001544, Length=213, Percent_Identity=27.6995305164319, Blast_Score=75, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17559120, Length=257, Percent_Identity=22.1789883268482, Blast_Score=73, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17568701, Length=255, Percent_Identity=27.0588235294118, Blast_Score=73, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25144137, Length=518, Percent_Identity=20.8494208494208, Blast_Score=72, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17508727, Length=157, Percent_Identity=29.2993630573248, Blast_Score=71, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17505659, Length=275, Percent_Identity=26.5454545454545, Blast_Score=70, Evalue=7e-12, Organism=Caenorhabditis elegans, GI71982270, Length=347, Percent_Identity=22.7665706051873, Blast_Score=69, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17551498, Length=200, Percent_Identity=31.5, Blast_Score=69, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71982263, Length=347, Percent_Identity=22.7665706051873, Blast_Score=67, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6319916, Length=496, Percent_Identity=22.7822580645161, Blast_Score=96, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6319675, Length=259, Percent_Identity=25.4826254826255, Blast_Score=87, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6319903, Length=437, Percent_Identity=23.3409610983982, Blast_Score=77, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6320056, Length=306, Percent_Identity=23.8562091503268, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323237, Length=309, Percent_Identity=25.8899676375405, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324322, Length=258, Percent_Identity=27.1317829457364, Blast_Score=70, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6325106, Length=176, Percent_Identity=27.8409090909091, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6325435, Length=111, Percent_Identity=31.5315315315315, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI24663767, Length=347, Percent_Identity=26.8011527377522, Blast_Score=108, Evalue=3e-23, Organism=Drosophila melanogaster, GI45549090, Length=430, Percent_Identity=22.3255813953488, Blast_Score=87, Evalue=7e-17, Organism=Drosophila melanogaster, GI161078943, Length=275, Percent_Identity=28.3636363636364, Blast_Score=87, Evalue=9e-17, Organism=Drosophila melanogaster, GI17864654, Length=294, Percent_Identity=25.1700680272109, Blast_Score=85, Evalue=3e-16, Organism=Drosophila melanogaster, GI19922278, Length=373, Percent_Identity=25.4691689008043, Blast_Score=85, Evalue=4e-16, Organism=Drosophila melanogaster, GI45552655, Length=346, Percent_Identity=26.878612716763, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI28573462, Length=346, Percent_Identity=26.878612716763, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI28573460, Length=346, Percent_Identity=26.878612716763, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI28573458, Length=346, Percent_Identity=26.878612716763, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI28573456, Length=346, Percent_Identity=26.878612716763, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI17137196, Length=346, Percent_Identity=26.878612716763, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI21356075, Length=318, Percent_Identity=24.8427672955975, Blast_Score=78, Evalue=4e-14, Organism=Drosophila melanogaster, GI24657400, Length=238, Percent_Identity=30.2521008403361, Blast_Score=78, Evalue=5e-14, Organism=Drosophila melanogaster, GI24657405, Length=238, Percent_Identity=30.2521008403361, Blast_Score=78, Evalue=5e-14, Organism=Drosophila melanogaster, GI17737533, Length=238, Percent_Identity=30.2521008403361, Blast_Score=78, Evalue=5e-14, Organism=Drosophila melanogaster, GI20129125, Length=321, Percent_Identity=25.5451713395639, Blast_Score=78, Evalue=5e-14, Organism=Drosophila melanogaster, GI21355245, Length=245, Percent_Identity=24.4897959183673, Blast_Score=77, Evalue=1e-13, Organism=Drosophila melanogaster, GI17137500, Length=365, Percent_Identity=24.6575342465753, Blast_Score=77, Evalue=1e-13, Organism=Drosophila melanogaster, GI24652663, Length=249, Percent_Identity=24.0963855421687, Blast_Score=75, Evalue=3e-13, Organism=Drosophila melanogaster, GI24654584, Length=214, Percent_Identity=28.5046728971963, Blast_Score=75, Evalue=4e-13, Organism=Drosophila melanogaster, GI24640523, Length=227, Percent_Identity=26.431718061674, Blast_Score=73, Evalue=1e-12, Organism=Drosophila melanogaster, GI17136870, Length=251, Percent_Identity=27.0916334661355, Blast_Score=73, Evalue=1e-12, Organism=Drosophila melanogaster, GI18859793, Length=315, Percent_Identity=23.1746031746032, Blast_Score=70, Evalue=1e-11, Organism=Drosophila melanogaster, GI21357147, Length=264, Percent_Identity=25.7575757575758, Blast_Score=70, Evalue=1e-11, Organism=Drosophila melanogaster, GI21355805, Length=263, Percent_Identity=23.574144486692, Blast_Score=67, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001646 - InterPro: IPR020472 - InterPro: IPR007111 - InterPro: IPR011047 - InterPro: IPR015943 - InterPro: IPR001680 - InterPro: IPR011046 - InterPro: IPR019782 - InterPro: IPR019775 - InterPro: IPR017986 - InterPro: IPR019781 [H]
Pfam domain/function: PF00805 Pentapeptide; PF00400 WD40 [H]
EC number: NA
Molecular weight: Translated: 153253; Mature: 153122
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00678 WD_REPEATS_1 ; PS50082 WD_REPEATS_2 ; PS50294 WD_REPEATS_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRIFVSFHAAEGGALADRVVRALEAAGYTDYYNYRVPGHRTAPGAAWAPDIRRNLLVSE CCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHC AFIAITTPKALDEWCSTEVAIFRERKPRAPFLEIVVGEASRRALTGALQGIRVRPDNEES EEEEEECCHHHHHHHCCCCEEHHCCCCCCCEEEEEECCCHHHHHHHHHHCCEECCCCHHH VAAALATVIAFLQARGVGTGPGRTSPYPGLAAFGERDAAVFFGRDDDIGRLAAAIEPRAH HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCHHHHHHHCCCCCC GAMAVVGPSGVGKSSLVLAGLVPRLRGMPSSAARTARWHVLGPVTPSTGAVRGLAEALSI CCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCEEEEEECCCCCCCHHHHHHHHHHHH QRAEVGLPPVPAATLEARIRADRVALAAMLDELIAAASARPPGGQIRVLIVLDQAEELVL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEE AASEPVRGRPEKRPDERWNESSGGRSDDLSVQQAEAVVLTEALVEASYRNAWLVYTVRSD ECCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHH YLDDLLRGTTFRALMQQAHLVRPLDRRELLAVVSEPVHQLGWSYETDALSAIVEDGARGS HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC LPMLAYALARLWDRVNPGGDREPRAIRRGEYDRAGRVQDVLREQAEAALAEALEQIGRAV HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGRSGATVDRRAAEHRMLDLLSRLASVGPDRGFTRRPLMITEIGDEELGLLRPFVERRVL HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH TTTRSLFVAQGTEQRAGELAERVLGIADVGDNALEVAHESLFGDWPRLRAHLGRQREALR HHHHHHEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHH ARGELEELAAAWLAGGKRDEDLIGQSRVQFLLADLLPSRDVRGDQTVTAWGWPNLADALV HCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHH TAGISADAVQLAGLSIQRVLGRLVQEAVLLERPEDGLRLLVGAGTNSDPETLAVQLSAPS HCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEECCC LEGWRAAVHRAEAQLRSTRLLTDRSVGRSAGMWGVAWSPDGSRVATGSRDGVIRIWDLSA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCCEEEEEECCC GDLVNAFAHGEDQIEQVDGWVRSVAWSPSADLVASASTDETTRVWSLDTGREVRSFRLPD CHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCHHHHCCCCC RPWAVRFSPAGDQVLTACASGHAVLWSTERRSRRPDYELLSKPSEAATAEAGPTEGGQSD CCEEEEECCCCHHHHHHHCCCCEEEEECHHHCCCCCHHHHCCCCHHCCCCCCCCCCCCCC GGSRGGGPRSRSDPERGIRIWDADIVTGDVTRIATACEDGVVDLWTLPSDRDADVPAPRR CCCCCCCCCCCCCHHHCCEEEECCEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCE IAAHPGVTVRSVRFSPGGGRIATAGQDNIIKVFEIEGGVELRRMSGHTDQVRRVAWSPLG EECCCCCEEEEEEECCCCCEEEECCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHCCCC NRVASASADTSIGVWDVHSGRRVLTLRGHRQGVCDVAWSAAGDQLISVSDDGTARVWKIG CHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHCCCCCCEEEECCCCCEEEEEEC AVETALVLVGAPASAMDRSRVTGEIAVAVAAGPTSATGNSFDVVVLRPDGTRTRTLSAAH CCEEEEEEEECCHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEHHHH RNTIRSVSWSPSGTRLLTASRDNTARIWRVDNVDYALENTLYAREGVEDARWSPDGVELV HHHHHEEECCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHH TAARDRVVRRYRADGEWLDRDERRPHPNFLRAVAWHPSRPEFALAAEDNRLTINTAEATV HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEECCCCCCEEEEECCCEEEEEEHHHHH DEHRTDKVLTSVAWSPTGEKLALGATDGTVLVLGAADGRIAGELHRLVGHEGEISTVDWS HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECC TDGERIVTSSADHTASVWDSHTGARLTSLVGHTGPVVGAVWAVDDASTTNMVVTTASADG CCCCEEEECCCCCCHHHHCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCC TIRTWDVSDIRRTPLSGLPDTEPGEPSAHATDQLIRDARVRLGR EEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure GRIFVSFHAAEGGALADRVVRALEAAGYTDYYNYRVPGHRTAPGAAWAPDIRRNLLVSE CEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHC AFIAITTPKALDEWCSTEVAIFRERKPRAPFLEIVVGEASRRALTGALQGIRVRPDNEES EEEEEECCHHHHHHHCCCCEEHHCCCCCCCEEEEEECCCHHHHHHHHHHCCEECCCCHHH VAAALATVIAFLQARGVGTGPGRTSPYPGLAAFGERDAAVFFGRDDDIGRLAAAIEPRAH HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCHHHHHHHCCCCCC GAMAVVGPSGVGKSSLVLAGLVPRLRGMPSSAARTARWHVLGPVTPSTGAVRGLAEALSI CCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCEEEEEECCCCCCCHHHHHHHHHHHH QRAEVGLPPVPAATLEARIRADRVALAAMLDELIAAASARPPGGQIRVLIVLDQAEELVL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEE AASEPVRGRPEKRPDERWNESSGGRSDDLSVQQAEAVVLTEALVEASYRNAWLVYTVRSD ECCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHH YLDDLLRGTTFRALMQQAHLVRPLDRRELLAVVSEPVHQLGWSYETDALSAIVEDGARGS HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC LPMLAYALARLWDRVNPGGDREPRAIRRGEYDRAGRVQDVLREQAEAALAEALEQIGRAV HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGRSGATVDRRAAEHRMLDLLSRLASVGPDRGFTRRPLMITEIGDEELGLLRPFVERRVL HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH TTTRSLFVAQGTEQRAGELAERVLGIADVGDNALEVAHESLFGDWPRLRAHLGRQREALR HHHHHHEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHH ARGELEELAAAWLAGGKRDEDLIGQSRVQFLLADLLPSRDVRGDQTVTAWGWPNLADALV HCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHH TAGISADAVQLAGLSIQRVLGRLVQEAVLLERPEDGLRLLVGAGTNSDPETLAVQLSAPS HCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEECCC LEGWRAAVHRAEAQLRSTRLLTDRSVGRSAGMWGVAWSPDGSRVATGSRDGVIRIWDLSA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCCEEEEEECCC GDLVNAFAHGEDQIEQVDGWVRSVAWSPSADLVASASTDETTRVWSLDTGREVRSFRLPD CHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCHHHHCCCCC RPWAVRFSPAGDQVLTACASGHAVLWSTERRSRRPDYELLSKPSEAATAEAGPTEGGQSD CCEEEEECCCCHHHHHHHCCCCEEEEECHHHCCCCCHHHHCCCCHHCCCCCCCCCCCCCC GGSRGGGPRSRSDPERGIRIWDADIVTGDVTRIATACEDGVVDLWTLPSDRDADVPAPRR CCCCCCCCCCCCCHHHCCEEEECCEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCE IAAHPGVTVRSVRFSPGGGRIATAGQDNIIKVFEIEGGVELRRMSGHTDQVRRVAWSPLG EECCCCCEEEEEEECCCCCEEEECCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHCCCC NRVASASADTSIGVWDVHSGRRVLTLRGHRQGVCDVAWSAAGDQLISVSDDGTARVWKIG CHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHCCCCCCEEEECCCCCEEEEEEC AVETALVLVGAPASAMDRSRVTGEIAVAVAAGPTSATGNSFDVVVLRPDGTRTRTLSAAH CCEEEEEEEECCHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEHHHH RNTIRSVSWSPSGTRLLTASRDNTARIWRVDNVDYALENTLYAREGVEDARWSPDGVELV HHHHHEEECCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHH TAARDRVVRRYRADGEWLDRDERRPHPNFLRAVAWHPSRPEFALAAEDNRLTINTAEATV HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEECCCCCCEEEEECCCEEEEEEHHHHH DEHRTDKVLTSVAWSPTGEKLALGATDGTVLVLGAADGRIAGELHRLVGHEGEISTVDWS HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECC TDGERIVTSSADHTASVWDSHTGARLTSLVGHTGPVVGAVWAVDDASTTNMVVTTASADG CCCCEEEECCCCCCHHHHCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCC TIRTWDVSDIRRTPLSGLPDTEPGEPSAHATDQLIRDARVRLGR EEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]