| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cysD [H]
Identifier: 158316008
GI number: 158316008
Start: 5033145
End: 5034080
Strand: Reverse
Name: cysD [H]
Synonym: Franean1_4226
Alternate gene names: 158316008
Gene position: 5034080-5033145 (Counterclockwise)
Preceding gene: 158316009
Following gene: 158316007
Centisome position: 56.05
GC content: 65.81
Gene sequence:
>936_bases ATGGAAAGAAGTCCATTCATGAGAACTCCACTGATGCCGAGGATGACGCATCTGCAGCGGCTGGAGGCGGAGAGCATCCA GATCTTCCGGGAGGCGGTGTCCGAGAGCGAGCGGCCGGTGATGCTGTACTCGGTCGGCAAGGACAGCTCGGTGATGCTGC ACCTGGCGATGAAGGCGTTCTACCCGTCGAAGCCGCCGTTCTCCCTGCTGCACGTGGACACGACCTGGAAGTTCCGGGAG ATGTACGAGTTCCGCGACAGTGTCGTCGACCAGCTCGGCGTCGAGCTGCTGGTGCACCAGAACCCGGAGTGCGTCAAGCG GGGGATCAATCCGTTCGACCACGGTTCGGCGACGCATACCGACCTGTGGAAGACCGAGGGTCTCAAGCAGGCGCTGGACA GGTACGGCTTCGACCTGGCGTTCGGGGGTGCGCGCCGCGACGAGGAGAAGTCCCGGGCGAAGGAGCGGGTGTTCTCCATC CGGTCCGCCCAGCACCGGTGGGATCCCAAGGCACAGCGGCCGGAGCTGTGGCGTCTCTACAACGCGCGCACGCAGCCCGG GCAGAGCGTCCGCGTGTTCCCGCTGTCCAACTGGACCGAACTGGACGTGTGGCAGTACATCCACCGCGAGCGGATCCCGA TCGTTCCCCTCTACTTCGCCGCGCACCGCCCCGTCGTCGAACGGGACGGCGCGCTGATCATGGTCGACGACGACCGCATG CCGCTGCGTCCCGGCGAGGTGCCGGCCCGACGCAGCGTCCGTTTCCGCACGCTGGGGTGCTACCCGCTGACCGGCGCGGT GGAGAGCACCGCCGGTACTCTCCCGCAGATCATCCAGGAGATGTTGCTGACGACGAGCTCGGAACGCCAGGGCCGGGTGA TCGACCATGACTCGTCCGGGTCGATGGAGAAGAAGAAGCAGGAGGGGTACTTCTGA
Upstream 100 bases:
>100_bases TTCGCGCTTCTGACCCGCAGGACACCCGGCCGAGACTCGATCCGGATCGCCCTGCGCCTCACCTAGTCTCCCACCGCGGT ATCCGGGGGTGCGTCCCTTG
Downstream 100 bases:
>100_bases TGGCGCACGCGGCCAGCGACCTCGTCGCGGACGACATCGAGGCATACCTGTCGGCGCACGAGCACAAGTCGATGCTGCGG TTCATCACCTGCGGCAGTGT
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MERSPFMRTPLMPRMTHLQRLEAESIQIFREAVSESERPVMLYSVGKDSSVMLHLAMKAFYPSKPPFSLLHVDTTWKFRE MYEFRDSVVDQLGVELLVHQNPECVKRGINPFDHGSATHTDLWKTEGLKQALDRYGFDLAFGGARRDEEKSRAKERVFSI RSAQHRWDPKAQRPELWRLYNARTQPGQSVRVFPLSNWTELDVWQYIHRERIPIVPLYFAAHRPVVERDGALIMVDDDRM PLRPGEVPARRSVRFRTLGCYPLTGAVESTAGTLPQIIQEMLLTTSSERQGRVIDHDSSGSMEKKKQEGYF
Sequences:
>Translated_311_residues MERSPFMRTPLMPRMTHLQRLEAESIQIFREAVSESERPVMLYSVGKDSSVMLHLAMKAFYPSKPPFSLLHVDTTWKFRE MYEFRDSVVDQLGVELLVHQNPECVKRGINPFDHGSATHTDLWKTEGLKQALDRYGFDLAFGGARRDEEKSRAKERVFSI RSAQHRWDPKAQRPELWRLYNARTQPGQSVRVFPLSNWTELDVWQYIHRERIPIVPLYFAAHRPVVERDGALIMVDDDRM PLRPGEVPARRSVRFRTLGCYPLTGAVESTAGTLPQIIQEMLLTTSSERQGRVIDHDSSGSMEKKKQEGYF >Mature_311_residues MERSPFMRTPLMPRMTHLQRLEAESIQIFREAVSESERPVMLYSVGKDSSVMLHLAMKAFYPSKPPFSLLHVDTTWKFRE MYEFRDSVVDQLGVELLVHQNPECVKRGINPFDHGSATHTDLWKTEGLKQALDRYGFDLAFGGARRDEEKSRAKERVFSI RSAQHRWDPKAQRPELWRLYNARTQPGQSVRVFPLSNWTELDVWQYIHRERIPIVPLYFAAHRPVVERDGALIMVDDDRM PLRPGEVPARRSVRFRTLGCYPLTGAVESTAGTLPQIIQEMLLTTSSERQGRVIDHDSSGSMEKKKQEGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=298, Percent_Identity=71.1409395973154, Blast_Score=449, Evalue=1e-127,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 36076; Mature: 36076
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERSPFMRTPLMPRMTHLQRLEAESIQIFREAVSESERPVMLYSVGKDSSVMLHLAMKAF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHH YPSKPPFSLLHVDTTWKFREMYEFRDSVVDQLGVELLVHQNPECVKRGINPFDHGSATHT CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHCCCCCCCCCCCCC DLWKTEGLKQALDRYGFDLAFGGARRDEEKSRAKERVFSIRSAQHRWDPKAQRPELWRLY HHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH NARTQPGQSVRVFPLSNWTELDVWQYIHRERIPIVPLYFAAHRPVVERDGALIMVDDDRM CCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEHHCCCCEEECCCEEEEECCCCC PLRPGEVPARRSVRFRTLGCYPLTGAVESTAGTLPQIIQEMLLTTSSERQGRVIDHDSSG CCCCCCCCCCCCEEEEEECCEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCC SMEKKKQEGYF CHHHHHHCCCC >Mature Secondary Structure MERSPFMRTPLMPRMTHLQRLEAESIQIFREAVSESERPVMLYSVGKDSSVMLHLAMKAF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHH YPSKPPFSLLHVDTTWKFREMYEFRDSVVDQLGVELLVHQNPECVKRGINPFDHGSATHT CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHCCCCCCCCCCCCC DLWKTEGLKQALDRYGFDLAFGGARRDEEKSRAKERVFSIRSAQHRWDPKAQRPELWRLY HHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH NARTQPGQSVRVFPLSNWTELDVWQYIHRERIPIVPLYFAAHRPVVERDGALIMVDDDRM CCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEHHCCCCEEECCCEEEEECCCCC PLRPGEVPARRSVRFRTLGCYPLTGAVESTAGTLPQIIQEMLLTTSSERQGRVIDHDSSG CCCCCCCCCCCCEEEEEECCEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCC SMEKKKQEGYF CHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]