Click here to switch to the map view.

The map label for this gene is 158316001

Identifier: 158316001

GI number: 158316001

Start: 5025438

End: 5026196

Strand: Reverse

Name: 158316001

Synonym: Franean1_4219

Alternate gene names: NA

Gene position: 5026196-5025438 (Counterclockwise)

Preceding gene: 158316003

Following gene: 158315997

Centisome position: 55.96

GC content: 67.72

Gene sequence:

>759_bases
GTGGGCAACACAGCCGCAGAGCAATGCTTCCGTGAGGTCATGACCGTCGAACCACCTGATGTGGCGACGCCCTTCGAGGT
GGCGACCCGCGACTTCGTGTTCGGGGAGGTGTGGCGCCGGCCCGGTCTGAGCCGGCGCGACCGGCGGTGGGTCACCCTGA
CCTGTGTGGCCGCTGCTGACGCGCCCGAGCCGATCGACGCCCACGTCTACGCGGCGCTCAACAGCAGTGACATCGAGCTC
GAGGCCATGCTGGAGTTCGTCCTCCATTTCGCCGTGTACTGCGGGTGGCCCAAGGCCTCTCATCTCGAGGGCGTGATAGT
CCGGCAGTGGGCTCGCATCCAGCAGGAACAGGGCAGGTCAGTGGCCCCGTGGCCGTCGCTCGACAACGGCGGGCTCGGGC
CCAACGACTGGGAACAGCGGCTGGAGCGAGGGGTCAAGGAGTTCATCGACGTGAATCTGACGCCGGCGCCGCGGCCCGAG
ACACCCTACCGTCACGCCGGAATCCTCAACTTCGTGTTCGGTCATGTCTGGCAGCGGCCGGGCCTCACCCGTCGCGAGCG
CCGCATCATCACCGTCGCCTGCGTCGCCATCGACGACTCGCCCATGCCGTTGAAGACGCACGTCACCTCCGCCCTGCACT
CCGGCGACCTCACGAAGGTGGAGATGGACGAGATCGTTCTACAGTTCTCCGCCTACTACGGCTTCGCCAAGGGCGCGGCG
CTGGGCGACACCGTGGAGGCGGCCGGGCTACCGGCGTAG

Upstream 100 bases:

>100_bases
GAATGCGTGGGAGCGTATGCGATCTGTCGTGGCCCCGCAGATCCGATCAGATTTCTCGGCCTTCAACTGGACGACTGTGC
GTGATCGGAGGGCTCATCCC

Downstream 100 bases:

>100_bases
ACGAGGCGGCAGGGGTGCAGGCAAGGGGGTGGCGTCAGGCGGAGAACAACCTGGCGGGTCTCCCGACTACGGCGATGCCC
TGACCTGGGTCGGGCATCGC

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: 4-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Protein

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MGNTAAEQCFREVMTVEPPDVATPFEVATRDFVFGEVWRRPGLSRRDRRWVTLTCVAAADAPEPIDAHVYAALNSSDIEL
EAMLEFVLHFAVYCGWPKASHLEGVIVRQWARIQQEQGRSVAPWPSLDNGGLGPNDWEQRLERGVKEFIDVNLTPAPRPE
TPYRHAGILNFVFGHVWQRPGLTRRERRIITVACVAIDDSPMPLKTHVTSALHSGDLTKVEMDEIVLQFSAYYGFAKGAA
LGDTVEAAGLPA

Sequences:

>Translated_252_residues
MGNTAAEQCFREVMTVEPPDVATPFEVATRDFVFGEVWRRPGLSRRDRRWVTLTCVAAADAPEPIDAHVYAALNSSDIEL
EAMLEFVLHFAVYCGWPKASHLEGVIVRQWARIQQEQGRSVAPWPSLDNGGLGPNDWEQRLERGVKEFIDVNLTPAPRPE
TPYRHAGILNFVFGHVWQRPGLTRRERRIITVACVAIDDSPMPLKTHVTSALHSGDLTKVEMDEIVLQFSAYYGFAKGAA
LGDTVEAAGLPA
>Mature_251_residues
GNTAAEQCFREVMTVEPPDVATPFEVATRDFVFGEVWRRPGLSRRDRRWVTLTCVAAADAPEPIDAHVYAALNSSDIELE
AMLEFVLHFAVYCGWPKASHLEGVIVRQWARIQQEQGRSVAPWPSLDNGGLGPNDWEQRLERGVKEFIDVNLTPAPRPET
PYRHAGILNFVFGHVWQRPGLTRRERRIITVACVAIDDSPMPLKTHVTSALHSGDLTKVEMDEIVLQFSAYYGFAKGAAL
GDTVEAAGLPA

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28036; Mature: 27905

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNTAAEQCFREVMTVEPPDVATPFEVATRDFVFGEVWRRPGLSRRDRRWVTLTCVAAAD
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECC
APEPIDAHVYAALNSSDIELEAMLEFVLHFAVYCGWPKASHLEGVIVRQWARIQQEQGRS
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
VAPWPSLDNGGLGPNDWEQRLERGVKEFIDVNLTPAPRPETPYRHAGILNFVFGHVWQRP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
GLTRRERRIITVACVAIDDSPMPLKTHVTSALHSGDLTKVEMDEIVLQFSAYYGFAKGAA
CCCHHHCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCHHCCCC
LGDTVEAAGLPA
CCCCHHHCCCCC
>Mature Secondary Structure 
GNTAAEQCFREVMTVEPPDVATPFEVATRDFVFGEVWRRPGLSRRDRRWVTLTCVAAAD
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECC
APEPIDAHVYAALNSSDIELEAMLEFVLHFAVYCGWPKASHLEGVIVRQWARIQQEQGRS
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
VAPWPSLDNGGLGPNDWEQRLERGVKEFIDVNLTPAPRPETPYRHAGILNFVFGHVWQRP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
GLTRRERRIITVACVAIDDSPMPLKTHVTSALHSGDLTKVEMDEIVLQFSAYYGFAKGAA
CCCHHHCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCHHCCCC
LGDTVEAAGLPA
CCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA