| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is yhjG [H]
Identifier: 158315918
GI number: 158315918
Start: 4915169
End: 4916608
Strand: Reverse
Name: yhjG [H]
Synonym: Franean1_4133
Alternate gene names: 158315918
Gene position: 4916608-4915169 (Counterclockwise)
Preceding gene: 158315919
Following gene: 158315916
Centisome position: 54.74
GC content: 68.61
Gene sequence:
>1440_bases ATGATTGATGTGATAGTGGTGGGCGGCGGACCGACCGGCCTGATGCTCGCCAGTGAACTGCGACTGCATGGCATCGACGT GCGGATCCTCGAGAAGGACACCGAGCCGACCCCGGTCGTCCGCTCCCTCGGCCTCCACGCCCGCAGCATCGAGATCATGG ACCAGCGTGGCCTGCTCGACCGGTTCCTCGCCCTCGGCACCCAACACCCGGTCGGTGGCTTCTTCGCCGGCATCAGCAAA CCCGCACCCGACCAGCTCGACACCGCACACCCCTACGTCCTCGGCATCCCACAGCCCACCACCGACCGCCTCCTCGCCGA ACACGCCACCGCACTCGGCGCCGACATCCGCCGCGGCCACGAACTGGTCGGACTCAACCAAGACGACGACACGGTCACCG CACACCTGGCCGACGGCACACACCTCCACGCCCGCTACCTCGTCGGCTGCGACGGCGGCCGCAGCACCGTCCGCAAACTG CTCGGCGTCCCCTTCCCCGGCGAACCCACCCGACACCAGACGCTCCTCGCCGAAGCGGAACTGACCGCCCCACCGGAGAC GATCAACGCCATAGTGACCAAGGTCCGCGAAACCCACAAACGGTTCGGCGCCGGCCCGCTGGGAAACGGGCTGTACCGCC TCATCGCACCCGCCGACGGGGTCGTCGAGGACCGCACCCCACCCACCCTCGACGAACTCAAACAGCAGATACGCAGACTC GCCGGCACCGACTTCGGCGCACACTCACCCCGCTGGCTCTCCCGCTTCGGTGACGCCACCCGCCAGGCCGAGCGGTACCG CACCGGCCGGGTTCTGCTCGCCGGCGACGCCGCGCACATCCACCCGCCGACCGGAGGACAGGGACTCAACCTCGGCGTGC AGGACGCGTTCAACCTCGGCTGGAAACTCGCCGCCACGATCAACGGCTGGGCACCGGCCGGACTGCTGGACACCTACCAC ACCGAACGACACCCGGTCGCCGCCGACGTCCTCACCAACACCCGTGCGCAGATGGAGCTGATGTCCCTCGACCCCGGCGC GCAGGCAGTACGCCGACTCCTGGTCGAACTGATGGACTTCGACGACGTCAACCGACACCTCACCGAAAAAATCATCGCGA TCGGGATCCGCTACGACTTCGGCGCCGGCCATCATCTGCTCGGCCGGCGGATGCGCGACATCGCGCTCAAACGCGGCCGC CTCTACCCGCTGATGCACCACGGCCGCGGACTGCTCCTCGACCAGACCGGACAGCTCTCCGTCACCGGCTGGGCGGACCG GGTCGACCACATCATCGACGTCAGCGACGAACTCGACGTCCCCGCCGCGCTCCTACGCCCCGACGGCCACATCGCCTGGG TCGGCGACAACCAGCAGGACCTGCTCGGCCACCTACCCACCTGGTTCGGCACCGCCACCACCCGAGCACAACGAAGCTGA
Upstream 100 bases:
>100_bases CGCGAAGCATCCGCGGGTACGTAGCCGCGCGGCCGGACCACGCAAAAAACTGGCCGAACAGAACCCTCGGTGAAATGGCA CTCTCGGTTAATGAGGATTC
Downstream 100 bases:
>100_bases TCACCATCACAGCGGAGGCAGGTCAGCCGAGGGTCCGCCGGTACCGCACGAGCCTGTCCCTGGTGGAGCCATCCGGTTCC CAACCCAGCTGGGAGTAGAA
Product: pentachlorophenol monooxygenase
Products: H2O; 3-(2,3-dihydroxyphenyl)propionate; NAD [C]
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MIDVIVVGGGPTGLMLASELRLHGIDVRILEKDTEPTPVVRSLGLHARSIEIMDQRGLLDRFLALGTQHPVGGFFAGISK PAPDQLDTAHPYVLGIPQPTTDRLLAEHATALGADIRRGHELVGLNQDDDTVTAHLADGTHLHARYLVGCDGGRSTVRKL LGVPFPGEPTRHQTLLAEAELTAPPETINAIVTKVRETHKRFGAGPLGNGLYRLIAPADGVVEDRTPPTLDELKQQIRRL AGTDFGAHSPRWLSRFGDATRQAERYRTGRVLLAGDAAHIHPPTGGQGLNLGVQDAFNLGWKLAATINGWAPAGLLDTYH TERHPVAADVLTNTRAQMELMSLDPGAQAVRRLLVELMDFDDVNRHLTEKIIAIGIRYDFGAGHHLLGRRMRDIALKRGR LYPLMHHGRGLLLDQTGQLSVTGWADRVDHIIDVSDELDVPAALLRPDGHIAWVGDNQQDLLGHLPTWFGTATTRAQRS
Sequences:
>Translated_479_residues MIDVIVVGGGPTGLMLASELRLHGIDVRILEKDTEPTPVVRSLGLHARSIEIMDQRGLLDRFLALGTQHPVGGFFAGISK PAPDQLDTAHPYVLGIPQPTTDRLLAEHATALGADIRRGHELVGLNQDDDTVTAHLADGTHLHARYLVGCDGGRSTVRKL LGVPFPGEPTRHQTLLAEAELTAPPETINAIVTKVRETHKRFGAGPLGNGLYRLIAPADGVVEDRTPPTLDELKQQIRRL AGTDFGAHSPRWLSRFGDATRQAERYRTGRVLLAGDAAHIHPPTGGQGLNLGVQDAFNLGWKLAATINGWAPAGLLDTYH TERHPVAADVLTNTRAQMELMSLDPGAQAVRRLLVELMDFDDVNRHLTEKIIAIGIRYDFGAGHHLLGRRMRDIALKRGR LYPLMHHGRGLLLDQTGQLSVTGWADRVDHIIDVSDELDVPAALLRPDGHIAWVGDNQQDLLGHLPTWFGTATTRAQRS >Mature_479_residues MIDVIVVGGGPTGLMLASELRLHGIDVRILEKDTEPTPVVRSLGLHARSIEIMDQRGLLDRFLALGTQHPVGGFFAGISK PAPDQLDTAHPYVLGIPQPTTDRLLAEHATALGADIRRGHELVGLNQDDDTVTAHLADGTHLHARYLVGCDGGRSTVRKL LGVPFPGEPTRHQTLLAEAELTAPPETINAIVTKVRETHKRFGAGPLGNGLYRLIAPADGVVEDRTPPTLDELKQQIRRL AGTDFGAHSPRWLSRFGDATRQAERYRTGRVLLAGDAAHIHPPTGGQGLNLGVQDAFNLGWKLAATINGWAPAGLLDTYH TERHPVAADVLTNTRAQMELMSLDPGAQAVRRLLVELMDFDDVNRHLTEKIIAIGIRYDFGAGHHLLGRRMRDIALKRGR LYPLMHHGRGLLLDQTGQLSVTGWADRVDHIIDVSDELDVPAALLRPDGHIAWVGDNQQDLLGHLPTWFGTATTRAQRS
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pheA/tfdB FAD monooxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786543, Length=343, Percent_Identity=34.402332361516, Blast_Score=143, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: 1.14.13.- [C]
Molecular weight: Translated: 52218; Mature: 52218
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDVIVVGGGPTGLMLASELRLHGIDVRILEKDTEPTPVVRSLGLHARSIEIMDQRGLLD CEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCEEEEEHHHCCHHH RFLALGTQHPVGGFFAGISKPAPDQLDTAHPYVLGIPQPTTDRLLAEHATALGADIRRGH HHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCC ELVGLNQDDDTVTAHLADGTHLHARYLVGCDGGRSTVRKLLGVPFPGEPTRHQTLLAEAE EEECCCCCCCCEEEEECCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCHHEEEECCC LTAPPETINAIVTKVRETHKRFGAGPLGNGLYRLIAPADGVVEDRTPPTLDELKQQIRRL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH AGTDFGAHSPRWLSRFGDATRQAERYRTGRVLLAGDAAHIHPPTGGQGLNLGVQDAFNLG HCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCHHHHHCCC WKLAATINGWAPAGLLDTYHTERHPVAADVLTNTRAQMELMSLDPGAQAVRRLLVELMDF EEEEEEECCCCCCCHHHHCCCCCCCCHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHCC DDVNRHLTEKIIAIGIRYDFGAGHHLLGRRMRDIALKRGRLYPLMHHGRGLLLDQTGQLS CHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEHHCCCEEEEECCCCEE VTGWADRVDHIIDVSDELDVPAALLRPDGHIAWVGDNQQDLLGHLPTWFGTATTRAQRS EEEHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEECCCHHHHHHCCCHHHCCCCHHCCCC >Mature Secondary Structure MIDVIVVGGGPTGLMLASELRLHGIDVRILEKDTEPTPVVRSLGLHARSIEIMDQRGLLD CEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCEEEEEHHHCCHHH RFLALGTQHPVGGFFAGISKPAPDQLDTAHPYVLGIPQPTTDRLLAEHATALGADIRRGH HHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCC ELVGLNQDDDTVTAHLADGTHLHARYLVGCDGGRSTVRKLLGVPFPGEPTRHQTLLAEAE EEECCCCCCCCEEEEECCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCHHEEEECCC LTAPPETINAIVTKVRETHKRFGAGPLGNGLYRLIAPADGVVEDRTPPTLDELKQQIRRL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH AGTDFGAHSPRWLSRFGDATRQAERYRTGRVLLAGDAAHIHPPTGGQGLNLGVQDAFNLG HCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCHHHHHCCC WKLAATINGWAPAGLLDTYHTERHPVAADVLTNTRAQMELMSLDPGAQAVRRLLVELMDF EEEEEEECCCCCCCHHHHCCCCCCCCHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHCC DDVNRHLTEKIIAIGIRYDFGAGHHLLGRRMRDIALKRGRLYPLMHHGRGLLLDQTGQLS CHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEHHCCCEEEEECCCCEE VTGWADRVDHIIDVSDELDVPAALLRPDGHIAWVGDNQQDLLGHLPTWFGTATTRAQRS EEEHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEECCCHHHHHHCCCHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3-(3-hydroxyphenyl)propionate; NADH; O2 [C]
Specific reaction: 3-(3-hydroxyphenyl)propionate + NADH + O2 = H2O + 3-(2,3-dihydroxyphenyl)propionate + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]