Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158315903

Identifier: 158315903

GI number: 158315903

Start: 4902183

End: 4902941

Strand: Reverse

Name: 158315903

Synonym: Franean1_4118

Alternate gene names: NA

Gene position: 4902941-4902183 (Counterclockwise)

Preceding gene: 158315904

Following gene: 158315900

Centisome position: 54.59

GC content: 70.88

Gene sequence:

>759_bases
GTGGGCGCGCCTACCACTACCAGCACCGGCCTGAGCTTCGGCCCGTTCGTCACCCTCGGCGTCGTCGTCTACCCGCTGCC
GATCCTCGCGTTCACCGCCGCCGCGTGCGGCGCCCGGCGCGCCGCACGCGCACTGCTGGGGCTCACCTGCCTCGCGGTAT
TCGCCACGGTGCCGGCCGCCGCGCACAGCGACGCCGAACGACCCCAGATGTACCTGCTCGTCGTCCTGTGCCTGCTGGCC
GCGATGGCGGCCGCCGGCCTGCCACCGACGATCCGCCGCCGCGACCTGTTCGCCGCGGCGGCGGTGTTCGGCCTGTTGTT
CGCCATGGCTACCGCCCGCAGCATCTCGCTCTTCCACCAGGCGTACTCCGGCGCTCCCTGGAACTACTGGAGCTACCCGT
TGCTCGCCTACCGCGGCCCCACCGGGCTCCTCGACACCCTCGAGATGACCATCCCGGCTGCCGTCGTCATCGGCGCCCTC
GCCGCGACCATGGTCAGCGTGCGACATCCCGGCTGGATCCTCACGACCTCCGTGATCGGCGGAACATTGTCACTCATGCC
GATCGCGGACTCGGTCCGCTACGGGCGCTGGGCATGGGAGGACAACTACGCCGGGAGCGGATTCGTCCTCCTGTTCGGCC
TCATCACGATCGCAGCCACCATCGACCTGTTCCGCGCCGCCGGGCTGAGAGTTGTCCGGACCGACACGGCCGTCACTCCG
GAAGCGAACCCGGGGGAGCCGGCGGACGGGTGCAGGTGA

Upstream 100 bases:

>100_bases
TTCCCGCGGCGGTGTGGCACCGCATCGCCACGACGGCCTTCGCGTCCCTCGCCGTGCTGTCGGCGGGCCTGCTCGTCGTC
GCGGAGTGGCTCCCTGAACC

Downstream 100 bases:

>100_bases
GGTCGGCGCTGGGCAGGGTGCCCGACCGCAGGTAGGCATTGACTGCGTCGTCGACACAGCCGCTGCGCACGCCGTACACG
CCGTGCACCCGTGCTCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MGAPTTTSTGLSFGPFVTLGVVVYPLPILAFTAAACGARRAARALLGLTCLAVFATVPAAAHSDAERPQMYLLVVLCLLA
AMAAAGLPPTIRRRDLFAAAAVFGLLFAMATARSISLFHQAYSGAPWNYWSYPLLAYRGPTGLLDTLEMTIPAAVVIGAL
AATMVSVRHPGWILTTSVIGGTLSLMPIADSVRYGRWAWEDNYAGSGFVLLFGLITIAATIDLFRAAGLRVVRTDTAVTP
EANPGEPADGCR

Sequences:

>Translated_252_residues
MGAPTTTSTGLSFGPFVTLGVVVYPLPILAFTAAACGARRAARALLGLTCLAVFATVPAAAHSDAERPQMYLLVVLCLLA
AMAAAGLPPTIRRRDLFAAAAVFGLLFAMATARSISLFHQAYSGAPWNYWSYPLLAYRGPTGLLDTLEMTIPAAVVIGAL
AATMVSVRHPGWILTTSVIGGTLSLMPIADSVRYGRWAWEDNYAGSGFVLLFGLITIAATIDLFRAAGLRVVRTDTAVTP
EANPGEPADGCR
>Mature_251_residues
GAPTTTSTGLSFGPFVTLGVVVYPLPILAFTAAACGARRAARALLGLTCLAVFATVPAAAHSDAERPQMYLLVVLCLLAA
MAAAGLPPTIRRRDLFAAAAVFGLLFAMATARSISLFHQAYSGAPWNYWSYPLLAYRGPTGLLDTLEMTIPAAVVIGALA
ATMVSVRHPGWILTTSVIGGTLSLMPIADSVRYGRWAWEDNYAGSGFVLLFGLITIAATIDLFRAAGLRVVRTDTAVTPE
ANPGEPADGCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26403; Mature: 26272

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAPTTTSTGLSFGPFVTLGVVVYPLPILAFTAAACGARRAARALLGLTCLAVFATVPAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AHSDAERPQMYLLVVLCLLAAMAAAGLPPTIRRRDLFAAAAVFGLLFAMATARSISLFHQ
HCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYSGAPWNYWSYPLLAYRGPTGLLDTLEMTIPAAVVIGALAATMVSVRHPGWILTTSVIG
HHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHC
GTLSLMPIADSVRYGRWAWEDNYAGSGFVLLFGLITIAATIDLFRAAGLRVVRTDTAVTP
CHHEEEECHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
EANPGEPADGCR
CCCCCCCCCCCC
>Mature Secondary Structure 
GAPTTTSTGLSFGPFVTLGVVVYPLPILAFTAAACGARRAARALLGLTCLAVFATVPAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AHSDAERPQMYLLVVLCLLAAMAAAGLPPTIRRRDLFAAAAVFGLLFAMATARSISLFHQ
HCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYSGAPWNYWSYPLLAYRGPTGLLDTLEMTIPAAVVIGALAATMVSVRHPGWILTTSVIG
HHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHC
GTLSLMPIADSVRYGRWAWEDNYAGSGFVLLFGLITIAATIDLFRAAGLRVVRTDTAVTP
CHHEEEECHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
EANPGEPADGCR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA