| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is fabG [H]
Identifier: 158315899
GI number: 158315899
Start: 4897372
End: 4898133
Strand: Reverse
Name: fabG [H]
Synonym: Franean1_4114
Alternate gene names: 158315899
Gene position: 4898133-4897372 (Counterclockwise)
Preceding gene: 158315900
Following gene: 158315896
Centisome position: 54.53
GC content: 71.13
Gene sequence:
>762_bases GTGTCCGAAGCCCCGTCCCGCGTCGCGATCGTCACCGGAGCAGCCCGCGGCATCGGCGCCGCCATCGCGCAGCGCCTGGC CCGTGACGGCATGGCGGTGGCCGTGCTCGACCTCGAGGAGTCAGCGGCCAAGACCACCGTGGATGCGATCGCGGCCGCGG GCGGGAAGGCGATCGCCCTGGGTGCCGACGTCTCCGACGCCGCCGCGGTGGACGCGGCCGTCGCCCGGGTGGCCGCCGAG CTCGGCGCGCCGACGGTGCTGGTCAACAACGCCGGTATCACCCGCGACAACATGCTGTTCAAGATGACCGAGGGCGACTG GGACGCGGTCATGGGCGTCCACCTGCGTGGCTCGTTCCTGACCGCCCGGGCCACCCAGAAGTACATGGTGGACGCGAAGT GGGGCCGGATCGTCAACCTCTCCAGCATCTCCGCGCTGGGCAACCGCGGCCAGGCGAACTACTCGGCAGCCAAGGCAGGC CTGCAGGGGTTCACCAAGACGCTGGCGATCGAGCTGGGCAAGTTCGGCATCACGGTGAACTGCGTGGCGCCCGGGTTCAT CGTCAGCGACATGACGCGGGCGACCGCCGAGCGCCTGGGTGTCGGCTGGGAGGACTACCTGGCCGTGGCGAAGTCGAAGA TCCCGGTCGCCCGGCCCGGCGAGGTCGACGACATCGCCCATGCGGTGTCGTTCTTCGTCGGCGAGGGCGCCGGCTTCGTG TCCGGCCAGGTTCTCTACGTCGCCGGCGGCCCGAAGGCCTGA
Upstream 100 bases:
>100_bases TGGTCCGGTCGCACCGGCGACTCGCCCGCGGCGGACGGCTGCCGGCGTGTGTCCGATCGCCACGCCGTCGCGCGTGGCGT CTGGTGTGAGGAGCCGGTCC
Downstream 100 bases:
>100_bases GCCTGTGGGCGGCCGGTGCCGCACTGGCGCGGCGCCGGCGTCGGCTGCCCGTCGGTACGGCGCCGCCGAGCGCCGTTGCC GAACGCCATCGGGGGACGCG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSEAPSRVAIVTGAARGIGAAIAQRLARDGMAVAVLDLEESAAKTTVDAIAAAGGKAIALGADVSDAAAVDAAVARVAAE LGAPTVLVNNAGITRDNMLFKMTEGDWDAVMGVHLRGSFLTARATQKYMVDAKWGRIVNLSSISALGNRGQANYSAAKAG LQGFTKTLAIELGKFGITVNCVAPGFIVSDMTRATAERLGVGWEDYLAVAKSKIPVARPGEVDDIAHAVSFFVGEGAGFV SGQVLYVAGGPKA
Sequences:
>Translated_253_residues MSEAPSRVAIVTGAARGIGAAIAQRLARDGMAVAVLDLEESAAKTTVDAIAAAGGKAIALGADVSDAAAVDAAVARVAAE LGAPTVLVNNAGITRDNMLFKMTEGDWDAVMGVHLRGSFLTARATQKYMVDAKWGRIVNLSSISALGNRGQANYSAAKAG LQGFTKTLAIELGKFGITVNCVAPGFIVSDMTRATAERLGVGWEDYLAVAKSKIPVARPGEVDDIAHAVSFFVGEGAGFV SGQVLYVAGGPKA >Mature_252_residues SEAPSRVAIVTGAARGIGAAIAQRLARDGMAVAVLDLEESAAKTTVDAIAAAGGKAIALGADVSDAAAVDAAVARVAAEL GAPTVLVNNAGITRDNMLFKMTEGDWDAVMGVHLRGSFLTARATQKYMVDAKWGRIVNLSSISALGNRGQANYSAAKAGL QGFTKTLAIELGKFGITVNCVAPGFIVSDMTRATAERLGVGWEDYLAVAKSKIPVARPGEVDDIAHAVSFFVGEGAGFVS GQVLYVAGGPKA
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=255, Percent_Identity=39.6078431372549, Blast_Score=164, Evalue=8e-41, Organism=Homo sapiens, GI40254992, Length=245, Percent_Identity=38.7755102040816, Blast_Score=146, Evalue=2e-35, Organism=Homo sapiens, GI4504505, Length=188, Percent_Identity=43.0851063829787, Blast_Score=117, Evalue=7e-27, Organism=Homo sapiens, GI32483357, Length=252, Percent_Identity=32.5396825396825, Blast_Score=107, Evalue=7e-24, Organism=Homo sapiens, GI19923817, Length=249, Percent_Identity=29.718875502008, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI5031737, Length=251, Percent_Identity=32.2709163346614, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI4758504, Length=256, Percent_Identity=30.078125, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI10190704, Length=251, Percent_Identity=31.8725099601594, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=32.6424870466321, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI126723750, Length=256, Percent_Identity=29.296875, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI40254986, Length=192, Percent_Identity=32.2916666666667, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=27.4193548387097, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI66933014, Length=249, Percent_Identity=29.3172690763052, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI31542939, Length=214, Percent_Identity=28.5046728971963, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI142976729, Length=204, Percent_Identity=26.4705882352941, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI83715985, Length=256, Percent_Identity=28.125, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI209862901, Length=195, Percent_Identity=28.2051282051282, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI19923983, Length=195, Percent_Identity=28.2051282051282, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI4503301, Length=210, Percent_Identity=26.1904761904762, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI210032110, Length=198, Percent_Identity=26.2626262626263, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI126723191, Length=179, Percent_Identity=31.2849162011173, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI7706318, Length=196, Percent_Identity=26.0204081632653, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI25282469, Length=221, Percent_Identity=24.8868778280543, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI40807363, Length=190, Percent_Identity=26.8421052631579, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI109715829, Length=252, Percent_Identity=25.3968253968254, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=41.6326530612245, Blast_Score=181, Evalue=3e-47, Organism=Escherichia coli, GI1790717, Length=242, Percent_Identity=31.8181818181818, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=30.0395256916996, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=36, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI87082160, Length=245, Percent_Identity=31.4285714285714, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1789208, Length=249, Percent_Identity=30.5220883534137, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1789057, Length=254, Percent_Identity=31.496062992126, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1788459, Length=248, Percent_Identity=32.6612903225806, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=31.0204081632653, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI2367365, Length=247, Percent_Identity=29.5546558704453, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=30.8300395256917, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=27.4900398406374, Blast_Score=65, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=41.7004048582996, Blast_Score=155, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=40.080971659919, Blast_Score=150, Evalue=9e-37, Organism=Caenorhabditis elegans, GI17568967, Length=188, Percent_Identity=40.4255319148936, Blast_Score=120, Evalue=9e-28, Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=30.2788844621514, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=31.3492063492063, Blast_Score=103, Evalue=7e-23, Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=33.0677290836653, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=29.8507462686567, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17560676, Length=256, Percent_Identity=28.515625, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562906, Length=263, Percent_Identity=27.3764258555133, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=28.8973384030418, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=28.4090909090909, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=28.1368821292776, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=27.7777777777778, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=28.6792452830189, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17538480, Length=257, Percent_Identity=27.6264591439689, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17560150, Length=263, Percent_Identity=27.7566539923954, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=27.6515151515151, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560332, Length=264, Percent_Identity=28.4090909090909, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562990, Length=268, Percent_Identity=27.9850746268657, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17564282, Length=196, Percent_Identity=27.0408163265306, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI71982365, Length=194, Percent_Identity=30.4123711340206, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17538182, Length=205, Percent_Identity=33.1707317073171, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=27.8884462151394, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17551412, Length=257, Percent_Identity=27.2373540856031, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17531453, Length=267, Percent_Identity=25.8426966292135, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17536651, Length=252, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=26.2357414448669, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI193203117, Length=221, Percent_Identity=26.6968325791855, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17508895, Length=198, Percent_Identity=25.7575757575758, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193203115, Length=221, Percent_Identity=26.6968325791855, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17565030, Length=264, Percent_Identity=30.6818181818182, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=25.9541984732824, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71997099, Length=211, Percent_Identity=29.3838862559242, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17560220, Length=274, Percent_Identity=26.6423357664234, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17555612, Length=203, Percent_Identity=32.0197044334975, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=25.3731343283582, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17561272, Length=237, Percent_Identity=27.4261603375527, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI32563809, Length=198, Percent_Identity=29.2929292929293, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17507613, Length=194, Percent_Identity=29.8969072164948, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=188, Percent_Identity=42.5531914893617, Blast_Score=123, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6324126, Length=249, Percent_Identity=30.9236947791165, Blast_Score=82, Evalue=8e-17, Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=42.4, Blast_Score=172, Evalue=2e-43, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=36.5461847389558, Blast_Score=127, Evalue=6e-30, Organism=Drosophila melanogaster, GI28571526, Length=259, Percent_Identity=37.0656370656371, Blast_Score=120, Evalue=8e-28, Organism=Drosophila melanogaster, GI18859837, Length=188, Percent_Identity=42.0212765957447, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI21355319, Length=257, Percent_Identity=31.1284046692607, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI24644339, Length=257, Percent_Identity=33.0739299610895, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24643142, Length=253, Percent_Identity=32.0158102766798, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24649181, Length=195, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI24644337, Length=253, Percent_Identity=31.2252964426877, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI17737361, Length=256, Percent_Identity=30.078125, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI21355631, Length=168, Percent_Identity=29.7619047619048, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581726, Length=198, Percent_Identity=26.7676767676768, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21357673, Length=194, Percent_Identity=28.8659793814433, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI221510726, Length=190, Percent_Identity=27.8947368421053, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24640492, Length=167, Percent_Identity=28.7425149700599, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI161076933, Length=189, Percent_Identity=30.6878306878307, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24584748, Length=189, Percent_Identity=30.6878306878307, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI281364892, Length=169, Percent_Identity=27.810650887574, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24656154, Length=224, Percent_Identity=29.0178571428571, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI19922628, Length=224, Percent_Identity=29.0178571428571, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI21358495, Length=200, Percent_Identity=28.5, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24665243, Length=197, Percent_Identity=29.9492385786802, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI221331218, Length=197, Percent_Identity=29.9492385786802, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24641232, Length=205, Percent_Identity=29.2682926829268, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25794; Mature: 25663
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAPSRVAIVTGAARGIGAAIAQRLARDGMAVAVLDLEESAAKTTVDAIAAAGGKAIAL CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEE GADVSDAAAVDAAVARVAAELGAPTVLVNNAGITRDNMLFKMTEGDWDAVMGVHLRGSFL ECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCEE TARATQKYMVDAKWGRIVNLSSISALGNRGQANYSAAKAGLQGFTKTLAIELGKFGITVN EECCCHHEEEECCCCCEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEE CVAPGFIVSDMTRATAERLGVGWEDYLAVAKSKIPVARPGEVDDIAHAVSFFVGEGAGFV EECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC SGQVLYVAGGPKA CCEEEEEECCCCC >Mature Secondary Structure SEAPSRVAIVTGAARGIGAAIAQRLARDGMAVAVLDLEESAAKTTVDAIAAAGGKAIAL CCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEE GADVSDAAAVDAAVARVAAELGAPTVLVNNAGITRDNMLFKMTEGDWDAVMGVHLRGSFL ECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCEE TARATQKYMVDAKWGRIVNLSSISALGNRGQANYSAAKAGLQGFTKTLAIELGKFGITVN EECCCHHEEEECCCCCEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEE CVAPGFIVSDMTRATAERLGVGWEDYLAVAKSKIPVARPGEVDDIAHAVSFFVGEGAGFV EECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC SGQVLYVAGGPKA CCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]