| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is corA [H]
Identifier: 158315896
GI number: 158315896
Start: 4894895
End: 4896148
Strand: Reverse
Name: corA [H]
Synonym: Franean1_4111
Alternate gene names: 158315896
Gene position: 4896148-4894895 (Counterclockwise)
Preceding gene: 158315899
Following gene: 158315895
Centisome position: 54.51
GC content: 70.81
Gene sequence:
>1254_bases ATGGACGCCGGGCCGGACAGGGGCCGCAGCGAGCTCGCGGAGGAGAACGGCGTGAACGGGCACGACCAGGACGGCACCGG CACCGGCGGACACCACGGGCACGGGCACGACAGCAACGGGCTCGACGACGGGCTCGACCTCGAGCACGGCGGCGGGTCGC TGCGCGACCTGCTCGCCGGTGCCCTGGCGCGCCCGGTGTCGCTGGTGCGCACCCGTCCCAAGCGGCCCCCGACGCCCACC GCCGAGCAGGTCCGTTCCGGGCAGGTCGTCGCCTGCCACGTCTACGCCGACGGCCAGCGGGTCCCCGACGGGTCGAACAT GCTGACCGCCGCGCACATCGCCCGCCGCCGCCATGGCGCGTTCGCCTGGCTGGGCCTGTTCGAGCCCACCGACTCCGAGC TGGAATCCATCGCCGGCATCTACGGCCTGCCCGCGCTCGCCGTGGAGGACGCCGTCGTCGCCCACCAGCGACCCAAGATC GAACGGTACGGCAGCACGCTGTTCGTGGTGCTCAAGACCGCCTGCTACGTCGAGCACGGCGAGCTGACCGCGGACACCGA GGTCGTCGTCACCGGCGAGGTGATGGTCTTCATCGGCTCCGACTTCGTCGTCACCGTCCGCCACGGTGCGCACGGTGGGC TCCAGCAGCTGCGCGGCGAGCTGGAGGGACGGCCGGAGATGCTGCGCCACGGGCCGTCCGCGGTGCTGCACGGCGTGTGC GACCGGGTCGTCGACGACTACCTGGCGGTCGTCGACCGCATCGAGGCCGACGTGGACGCCGCCGAGGCCTCGGTGTTCGA ACGCTCGGCGCGGCCGTCGGTGGAGAAGCTCTACCAGCTCAAGCGCGAGATCCTCGAGTTCAAGCACGCGGTGACCCCGC TGACCGCCCCGCTGCGGTCGCTGTCCGACACCCCACTGCCGATGATCGACCCGCACGTGCGTGACCACTTCCGGGACGTC TTCGACCATCTCGTGCAGGCCACGCAACGGATCACCCACCTCGACGAGCTGCTGTCGTCGATCCTGCAGGCGACACTGAC GCAGGTGACCATCGCGCAGAACGAGGACATGCGCAAGATCAGTGCGTGGGTGGCGATCGGGGCCGTGCCCACCGCGGTCG CCGGGATCTACGGAATGAACTTCGACCACATGCCCGAGCTGCGGCAGGTCTGGGGCTATCCGGCCGTGCTGGTGACAATC GCGACTGCCTGCCTGTTCCTGTACCGGGCGTTCCGCCGCAACGGCTGGCTCTGA
Upstream 100 bases:
>100_bases ACAGGGCGCGGCCACCGGCCGCCACCGTTCGTCCCGCCGCGGTCACCGCCGTGGACCCAGGGCTCATCCGGGGCCGGGGC CGCCTGCGCCGTCCGCAAGG
Downstream 100 bases:
>100_bases ACTCCTCGGGAGCCCTCGGCGGCCCCTCGGCCCGTGCCGCGGTGTGTGTGCCGCACCGGCCTGGGCATGCCGTAGCGAGG AGGTGGTGCCCATGGCGCGT
Product: Mg2 transporter protein CorA family protein
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MDAGPDRGRSELAEENGVNGHDQDGTGTGGHHGHGHDSNGLDDGLDLEHGGGSLRDLLAGALARPVSLVRTRPKRPPTPT AEQVRSGQVVACHVYADGQRVPDGSNMLTAAHIARRRHGAFAWLGLFEPTDSELESIAGIYGLPALAVEDAVVAHQRPKI ERYGSTLFVVLKTACYVEHGELTADTEVVVTGEVMVFIGSDFVVTVRHGAHGGLQQLRGELEGRPEMLRHGPSAVLHGVC DRVVDDYLAVVDRIEADVDAAEASVFERSARPSVEKLYQLKREILEFKHAVTPLTAPLRSLSDTPLPMIDPHVRDHFRDV FDHLVQATQRITHLDELLSSILQATLTQVTIAQNEDMRKISAWVAIGAVPTAVAGIYGMNFDHMPELRQVWGYPAVLVTI ATACLFLYRAFRRNGWL
Sequences:
>Translated_417_residues MDAGPDRGRSELAEENGVNGHDQDGTGTGGHHGHGHDSNGLDDGLDLEHGGGSLRDLLAGALARPVSLVRTRPKRPPTPT AEQVRSGQVVACHVYADGQRVPDGSNMLTAAHIARRRHGAFAWLGLFEPTDSELESIAGIYGLPALAVEDAVVAHQRPKI ERYGSTLFVVLKTACYVEHGELTADTEVVVTGEVMVFIGSDFVVTVRHGAHGGLQQLRGELEGRPEMLRHGPSAVLHGVC DRVVDDYLAVVDRIEADVDAAEASVFERSARPSVEKLYQLKREILEFKHAVTPLTAPLRSLSDTPLPMIDPHVRDHFRDV FDHLVQATQRITHLDELLSSILQATLTQVTIAQNEDMRKISAWVAIGAVPTAVAGIYGMNFDHMPELRQVWGYPAVLVTI ATACLFLYRAFRRNGWL >Mature_417_residues MDAGPDRGRSELAEENGVNGHDQDGTGTGGHHGHGHDSNGLDDGLDLEHGGGSLRDLLAGALARPVSLVRTRPKRPPTPT AEQVRSGQVVACHVYADGQRVPDGSNMLTAAHIARRRHGAFAWLGLFEPTDSELESIAGIYGLPALAVEDAVVAHQRPKI ERYGSTLFVVLKTACYVEHGELTADTEVVVTGEVMVFIGSDFVVTVRHGAHGGLQQLRGELEGRPEMLRHGPSAVLHGVC DRVVDDYLAVVDRIEADVDAAEASVFERSARPSVEKLYQLKREILEFKHAVTPLTAPLRSLSDTPLPMIDPHVRDHFRDV FDHLVQATQRITHLDELLSSILQATLTQVTIAQNEDMRKISAWVAIGAVPTAVAGIYGMNFDHMPELRQVWGYPAVLVTI ATACLFLYRAFRRNGWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 45467; Mature: 45467
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAGPDRGRSELAEENGVNGHDQDGTGTGGHHGHGHDSNGLDDGLDLEHGGGSLRDLLAG CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH ALARPVSLVRTRPKRPPTPTAEQVRSGQVVACHVYADGQRVPDGSNMLTAAHIARRRHGA HHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC FAWLGLFEPTDSELESIAGIYGLPALAVEDAVVAHQRPKIERYGSTLFVVLKTACYVEHG EEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCC ELTADTEVVVTGEVMVFIGSDFVVTVRHGAHGGLQQLRGELEGRPEMLRHGPSAVLHGVC CCCCCCEEEEECCEEEEECCCEEEEEECCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHH DRVVDDYLAVVDRIEADVDAAEASVFERSARPSVEKLYQLKREILEFKHAVTPLTAPLRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH LSDTPLPMIDPHVRDHFRDVFDHLVQATQRITHLDELLSSILQATLTQVTIAQNEDMRKI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SAWVAIGAVPTAVAGIYGMNFDHMPELRQVWGYPAVLVTIATACLFLYRAFRRNGWL HHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDAGPDRGRSELAEENGVNGHDQDGTGTGGHHGHGHDSNGLDDGLDLEHGGGSLRDLLAG CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH ALARPVSLVRTRPKRPPTPTAEQVRSGQVVACHVYADGQRVPDGSNMLTAAHIARRRHGA HHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC FAWLGLFEPTDSELESIAGIYGLPALAVEDAVVAHQRPKIERYGSTLFVVLKTACYVEHG EEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCC ELTADTEVVVTGEVMVFIGSDFVVTVRHGAHGGLQQLRGELEGRPEMLRHGPSAVLHGVC CCCCCCEEEEECCEEEEECCCEEEEEECCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHH DRVVDDYLAVVDRIEADVDAAEASVFERSARPSVEKLYQLKREILEFKHAVTPLTAPLRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH LSDTPLPMIDPHVRDHFRDVFDHLVQATQRITHLDELLSSILQATLTQVTIAQNEDMRKI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SAWVAIGAVPTAVAGIYGMNFDHMPELRQVWGYPAVLVTIATACLFLYRAFRRNGWL HHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]