| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315871
Identifier: 158315871
GI number: 158315871
Start: 4867369
End: 4867728
Strand: Reverse
Name: 158315871
Synonym: Franean1_4086
Alternate gene names: NA
Gene position: 4867728-4867369 (Counterclockwise)
Preceding gene: 158315872
Following gene: 158315869
Centisome position: 54.19
GC content: 57.22
Gene sequence:
>360_bases ATGACCTGCGCCGGCGCCCTCCGGCTGCTCTATCTGGCGTTCATTCTCGGCCCAAATATCCCAACCCTCACCCGGGTCAC CCGGCGGATTCTCCGAGACGTAGATATGCCAACCCGTTCCGGTTCTGTCTTTTTCTATGTAGATATAACGGCCATCACAC TCTCCGGCTACAACCCTTCCAGCCACGCCTGTCCGCCACAATGGAGACGAAGACCGTTCGCACTTATTCTACCGACATCC GTCGAACGGGAGCCGTCACCTACCAACATACGCCCCGCTAGCGCGGAATTAGGGCGCGAAGCTCGTCCCGCGATATTGAA CATCTTGGATCCGGTGCGAGCAAGTCTCACAATACGATAG
Upstream 100 bases:
>100_bases TCGCCGCAGGACGATGTGCGGTAGTCGGTCTGTCCTACCGGCTCGCTGAGGGCACCGTCGGCGTTGTCACCAGCCACGGG CCTGTACCCGCAGCCACCCG
Downstream 100 bases:
>100_bases GCCCTATACGCCGTGACCGCGCCCCCTGCCACTGGGATAAAGGAGGCTGCCGTCCCAGAAGGCGACAGGCCGCTCAGGAT CCGCGGGTGTGTGGCCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTCAGALRLLYLAFILGPNIPTLTRVTRRILRDVDMPTRSGSVFFYVDITAITLSGYNPSSHACPPQWRRRPFALILPTS VEREPSPTNIRPASAELGREARPAILNILDPVRASLTIR
Sequences:
>Translated_119_residues MTCAGALRLLYLAFILGPNIPTLTRVTRRILRDVDMPTRSGSVFFYVDITAITLSGYNPSSHACPPQWRRRPFALILPTS VEREPSPTNIRPASAELGREARPAILNILDPVRASLTIR >Mature_118_residues TCAGALRLLYLAFILGPNIPTLTRVTRRILRDVDMPTRSGSVFFYVDITAITLSGYNPSSHACPPQWRRRPFALILPTSV EREPSPTNIRPASAELGREARPAILNILDPVRASLTIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13228; Mature: 13096
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCAGALRLLYLAFILGPNIPTLTRVTRRILRDVDMPTRSGSVFFYVDITAITLSGYNPS CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCCCC SHACPPQWRRRPFALILPTSVEREPSPTNIRPASAELGREARPAILNILDPVRASLTIR CCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCEEEECC >Mature Secondary Structure TCAGALRLLYLAFILGPNIPTLTRVTRRILRDVDMPTRSGSVFFYVDITAITLSGYNPS CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCCCC SHACPPQWRRRPFALILPTSVEREPSPTNIRPASAELGREARPAILNILDPVRASLTIR CCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA