| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315867
Identifier: 158315867
GI number: 158315867
Start: 4864597
End: 4865592
Strand: Reverse
Name: 158315867
Synonym: Franean1_4082
Alternate gene names: NA
Gene position: 4865592-4864597 (Counterclockwise)
Preceding gene: 158315868
Following gene: 158315866
Centisome position: 54.17
GC content: 76.51
Gene sequence:
>996_bases GTGACGGCGTCCACCCCCGGCCCGCTGGGACGCTGGAGCGACGGCCGACTCGCCGCGTCGACGCGGTGGCTCGCCGCCCG CCTCGAGGGCGTGGACCCCGCGTTCACCCACGACGTGGCGCTCACCGTCGCGGAGGTCGGTGCCACCCGCGGCCGGCGCG CCCACCTCGGCGAGCTCGGGTCGCTCGCCGCGCTGGCGCTGCGCCTGCGCGCACGGGCCCGCGCCGGACCGGGACCTGTC GACATCTGGCGCGGCGGCCTGTACCTCGGCGCGGTGGTGTTACTGCTCGTCATGACGGTGGACGTCTGGACCGCACAGTT CGGCGGCGCGACGCCCCGGATCACCCCCGCTCTCCTGATTGGTCCGGTTCCCGGGTGGTGGACCGCCGTGACGGGGGTGA CCGGGGCGGTAGGCGTCGGACTGGGATACAGCGGGCGGCGGGCCGGCGCGCTGACGGCAACCGCGCTCACGGTCCTGGTC ACGATCACAGCCAGTCTGACCGCCGCAAACAGCGACGGGTACGGGGATCTCGGCTGGCTTTCCGGCCTCGGCGTGGTCTT CCTGGGCCTGCTGCTGGGCCGGCCGGCGCAAAGGCCGGCGGCAGCGGCCGGGCCCTCCGTGCGGCGCTGGCCGCGGTCCG CGCGCCGGGCCGGCGTCGCCGCGACCTACGCCGCCGGCCCGCTGCTCGCACTCGCCGCGACCTGCACCGCGGGAGAGGCG GCACCGGTCGCGCTCCGCCTCGGCCTGACCGTCCTGCTGCCCGCCTTGTGCGTCCTGCTCGGCGGGCAGGATCCACGACT GGCGGCCGCCGCGGCCGTCGTGTGGTTCGGCCGGCTCGCACTGGGTGCGCTCGGGGAGCTCGGCGACGCCCTGCGGACCG TGGCGCTCGACCGTGACGGGCTGCTCCTGCTGCGCTGGCTGCTGATGGCGGCGGGAGTGGCGATCGCGGTGGCGGTGACC GGCAGTGGAAGCCGCCGCCTCACCGAACTGCACTGA
Upstream 100 bases:
>100_bases ACCGGCTGACCAACACCGGTGCCGACCTGCTTGCTCAGGAGGCCGCGAGGCTGCGTGCGAACGCCGACCTGGCCGTGGCC CGGCTCGGGCTGCGCGGCAC
Downstream 100 bases:
>100_bases ACCTCGCCTCCAGCGGGGCGGCCAGCTGTCCCGTTGCCCACTAGTACGCCTACCGTTATATTGGCGATCAGAGTACCGGC TACCGATATAGACAAGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTASTPGPLGRWSDGRLAASTRWLAARLEGVDPAFTHDVALTVAEVGATRGRRAHLGELGSLAALALRLRARARAGPGPV DIWRGGLYLGAVVLLLVMTVDVWTAQFGGATPRITPALLIGPVPGWWTAVTGVTGAVGVGLGYSGRRAGALTATALTVLV TITASLTAANSDGYGDLGWLSGLGVVFLGLLLGRPAQRPAAAAGPSVRRWPRSARRAGVAATYAAGPLLALAATCTAGEA APVALRLGLTVLLPALCVLLGGQDPRLAAAAAVVWFGRLALGALGELGDALRTVALDRDGLLLLRWLLMAAGVAIAVAVT GSGSRRLTELH
Sequences:
>Translated_331_residues MTASTPGPLGRWSDGRLAASTRWLAARLEGVDPAFTHDVALTVAEVGATRGRRAHLGELGSLAALALRLRARARAGPGPV DIWRGGLYLGAVVLLLVMTVDVWTAQFGGATPRITPALLIGPVPGWWTAVTGVTGAVGVGLGYSGRRAGALTATALTVLV TITASLTAANSDGYGDLGWLSGLGVVFLGLLLGRPAQRPAAAAGPSVRRWPRSARRAGVAATYAAGPLLALAATCTAGEA APVALRLGLTVLLPALCVLLGGQDPRLAAAAAVVWFGRLALGALGELGDALRTVALDRDGLLLLRWLLMAAGVAIAVAVT GSGSRRLTELH >Mature_330_residues TASTPGPLGRWSDGRLAASTRWLAARLEGVDPAFTHDVALTVAEVGATRGRRAHLGELGSLAALALRLRARARAGPGPVD IWRGGLYLGAVVLLLVMTVDVWTAQFGGATPRITPALLIGPVPGWWTAVTGVTGAVGVGLGYSGRRAGALTATALTVLVT ITASLTAANSDGYGDLGWLSGLGVVFLGLLLGRPAQRPAAAAGPSVRRWPRSARRAGVAATYAAGPLLALAATCTAGEAA PVALRLGLTVLLPALCVLLGGQDPRLAAAAAVVWFGRLALGALGELGDALRTVALDRDGLLLLRWLLMAAGVAIAVAVTG SGSRRLTELH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33591; Mature: 33459
Theoretical pI: Translated: 11.90; Mature: 11.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASTPGPLGRWSDGRLAASTRWLAARLEGVDPAFTHDVALTVAEVGATRGRRAHLGELG CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH SLAALALRLRARARAGPGPVDIWRGGLYLGAVVLLLVMTVDVWTAQFGGATPRITPALLI HHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE GPVPGWWTAVTGVTGAVGVGLGYSGRRAGALTATALTVLVTITASLTAANSDGYGDLGWL ECCCCHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHH SGLGVVFLGLLLGRPAQRPAAAAGPSVRRWPRSARRAGVAATYAAGPLLALAATCTAGEA HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC APVALRLGLTVLLPALCVLLGGQDPRLAAAAAVVWFGRLALGALGELGDALRTVALDRDG CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LLLLRWLLMAAGVAIAVAVTGSGSRRLTELH HHHHHHHHHHCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure TASTPGPLGRWSDGRLAASTRWLAARLEGVDPAFTHDVALTVAEVGATRGRRAHLGELG CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH SLAALALRLRARARAGPGPVDIWRGGLYLGAVVLLLVMTVDVWTAQFGGATPRITPALLI HHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE GPVPGWWTAVTGVTGAVGVGLGYSGRRAGALTATALTVLVTITASLTAANSDGYGDLGWL ECCCCHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHH SGLGVVFLGLLLGRPAQRPAAAAGPSVRRWPRSARRAGVAATYAAGPLLALAATCTAGEA HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC APVALRLGLTVLLPALCVLLGGQDPRLAAAAAVVWFGRLALGALGELGDALRTVALDRDG CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LLLLRWLLMAAGVAIAVAVTGSGSRRLTELH HHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA