Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315853

Identifier: 158315853

GI number: 158315853

Start: 4849403

End: 4850707

Strand: Reverse

Name: 158315853

Synonym: Franean1_4068

Alternate gene names: NA

Gene position: 4850707-4849403 (Counterclockwise)

Preceding gene: 158315854

Following gene: 158315851

Centisome position: 54.0

GC content: 74.33

Gene sequence:

>1305_bases
ATGTCCACGCCAGCGACGAGCGCGACACGAAGGCGGCCGGTAACGATGACCCCCCTCCCCCAGGCCCACGCCGAGGAGAC
CGAGCAGTGGCTGACCCGGGTCGAGAAGGTCACCGGCCTGCTCGCCGAGCACCGGTCCCGGGCCGAGGAGGACCGCGCCA
CATCCCCGGAGGTCATCGACGCGTTGCGGGAGCAGGGCTTCCACCGGATGTGGGTGTCCCGCGCGTTCGGTGGCGCGGGG
GTGAGCCTGCGCACCGGATCGGCGGTGCTGCAGGCGATCGCGCGCACCGACCCGTCCGCCGCCTGGCAGATGGGCGTGCA
GGGCGCGATCGGGCGCATCTCCGACTACCTGTCCGACCAGGCCGCCTGCCGCCTGTTCTGCAGCAGCCACGGGCTCGTCG
TCGGCGGCATCAACCCGACCGGCCAGGCCGTGCCGGTACCCGGCGGGTACCGGCTCCGGGGCCGCTGGTCGTTCGCCAGC
GGTGCCACCCACGCCGACTGGCTCGTCGCCAGCGCGGTCGTCACCGGCGGCTGCGCCCAGACGTCCACGAACACCCCGGC
GCGCAGGTCGACACCCGCGCACGCCCCGACCCAGGTTCCGGCCCAGGCCCAGGTTCCGGGCAGTGCGCCGACGGGGAGCG
CGCCGATCCGGATGCTGTGCGTCCCGCGCGGCGCCGCCACCTTCACCGACGACTGGCACGCGCTGGGCCTGCGCGGCACC
GGCAGCGGGACCTTCACCGTGGACAACATCGTCGTCCCCGAAAGCCAGACCGTCGACGGCTCGCTGCTGCGGCGGCCACC
CACCGCACGAAAGTCCCGGGGTTACGCCATCGCCTACTACGACTTCGCACCGTTCACCACCGCCTCCACCGCGCTCGGCA
TAGCCCAGGACGCACTGCGCGCCTTCCGCCAGCTCGCCCTCCAGACCGTTCCCGCCCGCGCGACCGAGACCCTCGCCGGC
GGCCACACCGTGCAGGCCACGTTCGCCCGCGCCACCGCGCTCGTCCGCGCCAGCCGGCTGATGCTCGAGGACGCCGCCGA
CCAGGCGACGGAGCGCGGCGAGAACGGCGGCGACGAGCTGAGCGGGGTGATCCGGCTCGCCGCGGCCGCCGTCGGGGAGA
ACTGCGTCCAGGCCGTCACCATGCTGCACACCGCGGCCGGCGCGAGCGCGCTGCGCTCCGGCGGGGACCTCGACCGCTGC
TTCCGCGACGTCCACACCGCGGCCCGCCACATCACCCTCGCCGCGACGAACTTCGAGATGGTCGGCGCGCATCTGTTCGG
CGGCACACTGCTCATGCGCCGCTGA

Upstream 100 bases:

>100_bases
GCACACACGGCACTATTTCCTTTCAGCCGTCGATCCTGCGGGAGATTCCCTACCATCAGATCGTGGATGCGGATCTTCCC
CAGCGCGCGGCCCCGGCCAG

Downstream 100 bases:

>100_bases
CGTCCCCATCCGCCGCTGGCGCCGCTGCCTGCCGCCACCGTCACCCGGCCGGGGTCAGCCTCAGCTCGCGGCCGGGCCAC
CGGGAGCGCAGCCAGCGGTC

Product: acyl-CoA dehydrogenase type 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MSTPATSATRRRPVTMTPLPQAHAEETEQWLTRVEKVTGLLAEHRSRAEEDRATSPEVIDALREQGFHRMWVSRAFGGAG
VSLRTGSAVLQAIARTDPSAAWQMGVQGAIGRISDYLSDQAACRLFCSSHGLVVGGINPTGQAVPVPGGYRLRGRWSFAS
GATHADWLVASAVVTGGCAQTSTNTPARRSTPAHAPTQVPAQAQVPGSAPTGSAPIRMLCVPRGAATFTDDWHALGLRGT
GSGTFTVDNIVVPESQTVDGSLLRRPPTARKSRGYAIAYYDFAPFTTASTALGIAQDALRAFRQLALQTVPARATETLAG
GHTVQATFARATALVRASRLMLEDAADQATERGENGGDELSGVIRLAAAAVGENCVQAVTMLHTAAGASALRSGGDLDRC
FRDVHTAARHITLAATNFEMVGAHLFGGTLLMRR

Sequences:

>Translated_434_residues
MSTPATSATRRRPVTMTPLPQAHAEETEQWLTRVEKVTGLLAEHRSRAEEDRATSPEVIDALREQGFHRMWVSRAFGGAG
VSLRTGSAVLQAIARTDPSAAWQMGVQGAIGRISDYLSDQAACRLFCSSHGLVVGGINPTGQAVPVPGGYRLRGRWSFAS
GATHADWLVASAVVTGGCAQTSTNTPARRSTPAHAPTQVPAQAQVPGSAPTGSAPIRMLCVPRGAATFTDDWHALGLRGT
GSGTFTVDNIVVPESQTVDGSLLRRPPTARKSRGYAIAYYDFAPFTTASTALGIAQDALRAFRQLALQTVPARATETLAG
GHTVQATFARATALVRASRLMLEDAADQATERGENGGDELSGVIRLAAAAVGENCVQAVTMLHTAAGASALRSGGDLDRC
FRDVHTAARHITLAATNFEMVGAHLFGGTLLMRR
>Mature_433_residues
STPATSATRRRPVTMTPLPQAHAEETEQWLTRVEKVTGLLAEHRSRAEEDRATSPEVIDALREQGFHRMWVSRAFGGAGV
SLRTGSAVLQAIARTDPSAAWQMGVQGAIGRISDYLSDQAACRLFCSSHGLVVGGINPTGQAVPVPGGYRLRGRWSFASG
ATHADWLVASAVVTGGCAQTSTNTPARRSTPAHAPTQVPAQAQVPGSAPTGSAPIRMLCVPRGAATFTDDWHALGLRGTG
SGTFTVDNIVVPESQTVDGSLLRRPPTARKSRGYAIAYYDFAPFTTASTALGIAQDALRAFRQLALQTVPARATETLAGG
HTVQATFARATALVRASRLMLEDAADQATERGENGGDELSGVIRLAAAAVGENCVQAVTMLHTAAGASALRSGGDLDRCF
RDVHTAARHITLAATNFEMVGAHLFGGTLLMRR

Specific function: Gives rise to a blue or pink color to bacterial colonies. May have an hydroxylase activity, resulting in the observed pigment production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 45659; Mature: 45528

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPATSATRRRPVTMTPLPQAHAEETEQWLTRVEKVTGLLAEHRSRAEEDRATSPEVID
CCCCCCCHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALREQGFHRMWVSRAFGGAGVSLRTGSAVLQAIARTDPSAAWQMGVQGAIGRISDYLSDQ
HHHHCCHHHHHHHHHCCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AACRLFCSSHGLVVGGINPTGQAVPVPGGYRLRGRWSFASGATHADWLVASAVVTGGCAQ
HHHHHHCCCCCEEEECCCCCCCEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCC
TSTNTPARRSTPAHAPTQVPAQAQVPGSAPTGSAPIRMLCVPRGAATFTDDWHALGLRGT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEC
GSGTFTVDNIVVPESQTVDGSLLRRPPTARKSRGYAIAYYDFAPFTTASTALGIAQDALR
CCCCEEEEEEECCCCCCCCCHHHCCCCCCHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
AFRQLALQTVPARATETLAGGHTVQATFARATALVRASRLMLEDAADQATERGENGGDEL
HHHHHHHHHCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
SGVIRLAAAAVGENCVQAVTMLHTAAGASALRSGGDLDRCFRDVHTAARHITLAATNFEM
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHEEEEEECCHHH
VGAHLFGGTLLMRR
HHHHHHCCEEEECC
>Mature Secondary Structure 
STPATSATRRRPVTMTPLPQAHAEETEQWLTRVEKVTGLLAEHRSRAEEDRATSPEVID
CCCCCCHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALREQGFHRMWVSRAFGGAGVSLRTGSAVLQAIARTDPSAAWQMGVQGAIGRISDYLSDQ
HHHHCCHHHHHHHHHCCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AACRLFCSSHGLVVGGINPTGQAVPVPGGYRLRGRWSFASGATHADWLVASAVVTGGCAQ
HHHHHHCCCCCEEEECCCCCCCEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCC
TSTNTPARRSTPAHAPTQVPAQAQVPGSAPTGSAPIRMLCVPRGAATFTDDWHALGLRGT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEC
GSGTFTVDNIVVPESQTVDGSLLRRPPTARKSRGYAIAYYDFAPFTTASTALGIAQDALR
CCCCEEEEEEECCCCCCCCCHHHCCCCCCHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
AFRQLALQTVPARATETLAGGHTVQATFARATALVRASRLMLEDAADQATERGENGGDEL
HHHHHHHHHCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
SGVIRLAAAAVGENCVQAVTMLHTAAGASALRSGGDLDRCFRDVHTAARHITLAATNFEM
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHEEEEEECCHHH
VGAHLFGGTLLMRR
HHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2230720 [H]