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The map label for this gene is gvpJ2 [H]

Identifier: 158315798

GI number: 158315798

Start: 4791796

End: 4792320

Strand: Reverse

Name: gvpJ2 [H]

Synonym: Franean1_4012

Alternate gene names: 158315798

Gene position: 4792320-4791796 (Counterclockwise)

Preceding gene: 158315799

Following gene: 158315797

Centisome position: 53.35

GC content: 67.62

Gene sequence:

>525_bases
ATGACGGTCGATCGCGGCTCTCTTGCCGGTCCCCCGCGGTTGCGCGCGCTGAGCGGGCCGCGCTCGGACTCTCTCGCCGA
TGTACTGGAGAGAGTTCTCGACAAGGGAGTAGTGATCGTCGGCGACGTCGTCATCAGCGTTCTTGACGTCGAGTTGCTCA
CGCTCAAACTGCGGCTTTTCATCGCATCAGCCGACACCGCACGCGAAATGGGTCTGGACTGGTGGACCACCGACCCCTTC
TACAGCCGTGAGGCGCGATCGTTGCAGCAGGAGAAGGAGCGGGAACTGCGCGACGAGACCATGCGGGCGCTCCATGCGGA
GAACGAGGAACTGCGCTCCAGACTCGCCGTTCTCGAGAGTTCGGTGCGGGAGCGTCTCCCGTTCCGGGAGGCGGCCGCGG
TCGAATCCCGGGCAGAGCCGTCCACCGGAGCCCCGGTGGAGGTGGCCGCCCGCCGCGACGAGCCGCGGCCGTTCTGGGCG
CGGGACGCGGAACGGAGGCATGACGGTGGCCCCGGAAGACGCTGA

Upstream 100 bases:

>100_bases
CGGAGGTTCGTGCGCGGCGCCACCGACTGAGCACGTACACGGCCGATATGGGTAGGTAAGCCGGAGACTCGGCACGGCGG
AATTCGGAAGAACGTGAGTC

Downstream 100 bases:

>100_bases
CTTCGGCAGCCTCGACGAACTGGCGGTCCAGCTCGCGCCGGGCGTCCTGGACGAAGCTGTGGCCGAAGCCCGCGAGGTCG
CGCGTGGGCAACTCGCCCGA

Product: gas vesicle protein GVPa

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTVDRGSLAGPPRLRALSGPRSDSLADVLERVLDKGVVIVGDVVISVLDVELLTLKLRLFIASADTAREMGLDWWTTDPF
YSREARSLQQEKERELRDETMRALHAENEELRSRLAVLESSVRERLPFREAAAVESRAEPSTGAPVEVAARRDEPRPFWA
RDAERRHDGGPGRR

Sequences:

>Translated_174_residues
MTVDRGSLAGPPRLRALSGPRSDSLADVLERVLDKGVVIVGDVVISVLDVELLTLKLRLFIASADTAREMGLDWWTTDPF
YSREARSLQQEKERELRDETMRALHAENEELRSRLAVLESSVRERLPFREAAAVESRAEPSTGAPVEVAARRDEPRPFWA
RDAERRHDGGPGRR
>Mature_173_residues
TVDRGSLAGPPRLRALSGPRSDSLADVLERVLDKGVVIVGDVVISVLDVELLTLKLRLFIASADTAREMGLDWWTTDPFY
SREARSLQQEKERELRDETMRALHAENEELRSRLAVLESSVRERLPFREAAAVESRAEPSTGAPVEVAARRDEPRPFWAR
DAERRHDGGPGRR

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. This protein could be important for the shape determ

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000638
- InterPro:   IPR018493 [H]

Pfam domain/function: PF00741 Gas_vesicle [H]

EC number: NA

Molecular weight: Translated: 19583; Mature: 19452

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS00234 GAS_VESICLE_A_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVDRGSLAGPPRLRALSGPRSDSLADVLERVLDKGVVIVGDVVISVLDVELLTLKLRLF
CCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
IASADTAREMGLDWWTTDPFYSREARSLQQEKERELRDETMRALHAENEELRSRLAVLES
HHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SVRERLPFREAAAVESRAEPSTGAPVEVAARRDEPRPFWARDAERRHDGGPGRR
HHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure 
TVDRGSLAGPPRLRALSGPRSDSLADVLERVLDKGVVIVGDVVISVLDVELLTLKLRLF
CCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
IASADTAREMGLDWWTTDPFYSREARSLQQEKERELRDETMRALHAENEELRSRLAVLES
HHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SVRERLPFREAAAVESRAEPSTGAPVEVAARRDEPRPFWARDAERRHDGGPGRR
HHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]