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The map label for this gene is mmgC [H]

Identifier: 158315718

GI number: 158315718

Start: 4699645

End: 4700802

Strand: Reverse

Name: mmgC [H]

Synonym: Franean1_3930

Alternate gene names: 158315718

Gene position: 4700802-4699645 (Counterclockwise)

Preceding gene: 158315722

Following gene: 158315716

Centisome position: 52.34

GC content: 72.54

Gene sequence:

>1158_bases
GTGCTCGATGATGATGTGCGGCAGGTCATCGCCTCGACCCGGCGTTTCGTGCGCGAGCGCGTGGTACCGGCGGAGGCGGA
GATCGAGCGGACCGACGCGATCCCGCCCGACCTGCGCCGTGCGGCGGCGGCGATGGGCCTGTTCGGGTTCGCCGTCCCCG
AGGAGTACGGCGGCCTGGGGCTGGACATGAGCGCCGAGGTCCGGCTCGTCTTCGAGCTGGGCTACACCACGCCGGCCTTC
CGCTCGATGTTCGGGACCAACAACGGCATCGCCGGCCACGTCCTGCTCGAGGGCGCGACCCAGGAACAGAAGAAGGCCTA
CCTGCCGCTGATCGCCTCGGGCGAGTGGACGGCCGCGTTCGCCCTCACCGAGGAGAACGCCGGCTCCGACCCCGCGGGCC
TGGCGACATCCGCGCGCCGCGACGGCGACGAGTGGGTGATCAACGGTGCCAAGCGCTTCATCACCAACGCGCCGCTGGCC
GACGTCTTCATGGTCTTCGCCCGCACCGACCCCGGTGCCGAGGGCGGGCACGGCATCACGGCGTTCATGGTGGAACGCGA
CGCGCCGGGGCTGAGCGTCGGCCCGAAGGACCACAAGATGGGCCAGGCGGGCGCGTGGACGGCGGACGTCCTGCTGGCCG
ACGTGCGGGTCCCGGCGTCGGCGGTGATCGGCGGCGAGGACGGGGTGGGTCGCGGCTACGCGACCGCGATGCGCTGCCTG
GCCCACGGCCGGATCCACATCGCCGCGCTGTGCGTCGGACTGGCCCAGCGGCTGGTCGACGAGTCCGTGTCCTATGCCGC
GACCAGGGTGCAGGGCGGCGGCGTGATCGGCACCCACCAGCTCGTGCAGGGACTGCTCGCCGACTCCGCCACCGACCTCT
ACGCGGCGCGGGCGCTCGTCCTCGACGTGGCCGCCCGGTTCGACGACGGCAGCGACACCCGGATCGGGCCCTCGTGCGCG
AAGTACTTCGCCTCCGAGGCGGTCGGGCGGGTCGCCGACCGGGCGGTGCAGATCCACGGCGGGGCGGGCTACATGCGCGG
AGTCCCGGTCGAGCGCTTCTACCGGGACGCGCGGCTGTTCCGGATCTACGAGGGCACGAGCCAGATCCAGCAGATCGTGA
TCGCCCGTCAGCTCCTGCGCGACGCCGGCGTCAGGTAA

Upstream 100 bases:

>100_bases
ACACGGCCCGCGGTCGATGGACGCGGGGGGCGGGCGGCGGGACGCTCATCCGGTCCGCCGACCGTGGACCGTGAGCGGAC
CAGACCTGGATGGAGATCTC

Downstream 100 bases:

>100_bases
CGGCCGGGGTGGACGGCCCCGCCCCTGTCAGCCGACCCGAATCAGCCGACCCGTTCGAAGATCGCGGTGATCCCCTGGCC
GCCGCCGATGCACAGGGTCT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MLDDDVRQVIASTRRFVRERVVPAEAEIERTDAIPPDLRRAAAAMGLFGFAVPEEYGGLGLDMSAEVRLVFELGYTTPAF
RSMFGTNNGIAGHVLLEGATQEQKKAYLPLIASGEWTAAFALTEENAGSDPAGLATSARRDGDEWVINGAKRFITNAPLA
DVFMVFARTDPGAEGGHGITAFMVERDAPGLSVGPKDHKMGQAGAWTADVLLADVRVPASAVIGGEDGVGRGYATAMRCL
AHGRIHIAALCVGLAQRLVDESVSYAATRVQGGGVIGTHQLVQGLLADSATDLYAARALVLDVAARFDDGSDTRIGPSCA
KYFASEAVGRVADRAVQIHGGAGYMRGVPVERFYRDARLFRIYEGTSQIQQIVIARQLLRDAGVR

Sequences:

>Translated_385_residues
MLDDDVRQVIASTRRFVRERVVPAEAEIERTDAIPPDLRRAAAAMGLFGFAVPEEYGGLGLDMSAEVRLVFELGYTTPAF
RSMFGTNNGIAGHVLLEGATQEQKKAYLPLIASGEWTAAFALTEENAGSDPAGLATSARRDGDEWVINGAKRFITNAPLA
DVFMVFARTDPGAEGGHGITAFMVERDAPGLSVGPKDHKMGQAGAWTADVLLADVRVPASAVIGGEDGVGRGYATAMRCL
AHGRIHIAALCVGLAQRLVDESVSYAATRVQGGGVIGTHQLVQGLLADSATDLYAARALVLDVAARFDDGSDTRIGPSCA
KYFASEAVGRVADRAVQIHGGAGYMRGVPVERFYRDARLFRIYEGTSQIQQIVIARQLLRDAGVR
>Mature_385_residues
MLDDDVRQVIASTRRFVRERVVPAEAEIERTDAIPPDLRRAAAAMGLFGFAVPEEYGGLGLDMSAEVRLVFELGYTTPAF
RSMFGTNNGIAGHVLLEGATQEQKKAYLPLIASGEWTAAFALTEENAGSDPAGLATSARRDGDEWVINGAKRFITNAPLA
DVFMVFARTDPGAEGGHGITAFMVERDAPGLSVGPKDHKMGQAGAWTADVLLADVRVPASAVIGGEDGVGRGYATAMRCL
AHGRIHIAALCVGLAQRLVDESVSYAATRVQGGGVIGTHQLVQGLLADSATDLYAARALVLDVAARFDDGSDTRIGPSCA
KYFASEAVGRVADRAVQIHGGAGYMRGVPVERFYRDARLFRIYEGTSQIQQIVIARQLLRDAGVR

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=380, Percent_Identity=36.8421052631579, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI4557231, Length=378, Percent_Identity=36.5079365079365, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI187960098, Length=378, Percent_Identity=36.5079365079365, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI226958412, Length=378, Percent_Identity=33.5978835978836, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI4501859, Length=377, Percent_Identity=33.9522546419098, Blast_Score=224, Evalue=9e-59,
Organism=Homo sapiens, GI4501857, Length=372, Percent_Identity=34.4086021505376, Blast_Score=218, Evalue=8e-57,
Organism=Homo sapiens, GI76496475, Length=386, Percent_Identity=37.0466321243523, Blast_Score=214, Evalue=9e-56,
Organism=Homo sapiens, GI4557235, Length=386, Percent_Identity=37.0466321243523, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI21361497, Length=387, Percent_Identity=34.3669250645995, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI226958414, Length=338, Percent_Identity=35.207100591716, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI7656849, Length=381, Percent_Identity=32.2834645669291, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI4503943, Length=368, Percent_Identity=27.445652173913, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI7669494, Length=356, Percent_Identity=27.247191011236, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI38505218, Length=403, Percent_Identity=25.8064516129032, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI48976061, Length=407, Percent_Identity=27.027027027027, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI211971008, Length=407, Percent_Identity=27.027027027027, Blast_Score=112, Evalue=5e-25,
Organism=Escherichia coli, GI87081958, Length=384, Percent_Identity=30.9895833333333, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1786223, Length=380, Percent_Identity=28.1578947368421, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI87081702, Length=333, Percent_Identity=27.9279279279279, Blast_Score=96, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17570075, Length=380, Percent_Identity=39.2105263157895, Blast_Score=248, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI17534899, Length=383, Percent_Identity=37.3368146214099, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI17569725, Length=381, Percent_Identity=37.7952755905512, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI17506239, Length=365, Percent_Identity=37.8082191780822, Blast_Score=232, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17508101, Length=375, Percent_Identity=35.4666666666667, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17538396, Length=383, Percent_Identity=33.420365535248, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI71985184, Length=354, Percent_Identity=35.8757062146893, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17533517, Length=383, Percent_Identity=31.331592689295, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI71990804, Length=298, Percent_Identity=34.5637583892617, Blast_Score=164, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI32563615, Length=225, Percent_Identity=41.3333333333333, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI71982178, Length=272, Percent_Identity=33.8235294117647, Blast_Score=158, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI71985192, Length=309, Percent_Identity=34.3042071197411, Blast_Score=154, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17534353, Length=377, Percent_Identity=27.3209549071618, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17531909, Length=243, Percent_Identity=34.156378600823, Blast_Score=134, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI17505929, Length=379, Percent_Identity=27.4406332453826, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17551932, Length=367, Percent_Identity=26.7029972752044, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17562446, Length=359, Percent_Identity=27.5766016713092, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI86563383, Length=286, Percent_Identity=29.3706293706294, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI86563381, Length=286, Percent_Identity=29.3706293706294, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24660351, Length=383, Percent_Identity=38.1201044386423, Blast_Score=241, Evalue=8e-64,
Organism=Drosophila melanogaster, GI24666513, Length=381, Percent_Identity=34.9081364829396, Blast_Score=228, Evalue=6e-60,
Organism=Drosophila melanogaster, GI24646207, Length=381, Percent_Identity=37.7952755905512, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI281363737, Length=346, Percent_Identity=36.4161849710983, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI21355753, Length=381, Percent_Identity=34.3832020997375, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI21356377, Length=380, Percent_Identity=33.9473684210526, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI19920834, Length=372, Percent_Identity=27.4193548387097, Blast_Score=128, Evalue=8e-30,
Organism=Drosophila melanogaster, GI24652780, Length=361, Percent_Identity=23.5457063711911, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40979; Mature: 40979

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDDDVRQVIASTRRFVRERVVPAEAEIERTDAIPPDLRRAAAAMGLFGFAVPEEYGGLG
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHCCCC
LDMSAEVRLVFELGYTTPAFRSMFGTNNGIAGHVLLEGATQEQKKAYLPLIASGEWTAAF
CCCCCCEEEEEEECCCCHHHHHHHCCCCCCEEEEEEECCCHHHHHCCCCEEECCCCEEEE
ALTEENAGSDPAGLATSARRDGDEWVINGAKRFITNAPLADVFMVFARTDPGAEGGHGIT
EEECCCCCCCCCCCCHHHCCCCCHHEEHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEE
AFMVERDAPGLSVGPKDHKMGQAGAWTADVLLADVRVPASAVIGGEDGVGRGYATAMRCL
EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHEEECCCCCCCCHHHHHHHHH
AHGRIHIAALCVGLAQRLVDESVSYAATRVQGGGVIGTHQLVQGLLADSATDLYAARALV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECHHHHHHHHHHCCHHHHHHHHHHH
LDVAARFDDGSDTRIGPSCAKYFASEAVGRVADRAVQIHGGAGYMRGVPVERFYRDARLF
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHE
RIYEGTSQIQQIVIARQLLRDAGVR
EEECCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLDDDVRQVIASTRRFVRERVVPAEAEIERTDAIPPDLRRAAAAMGLFGFAVPEEYGGLG
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHCCCC
LDMSAEVRLVFELGYTTPAFRSMFGTNNGIAGHVLLEGATQEQKKAYLPLIASGEWTAAF
CCCCCCEEEEEEECCCCHHHHHHHCCCCCCEEEEEEECCCHHHHHCCCCEEECCCCEEEE
ALTEENAGSDPAGLATSARRDGDEWVINGAKRFITNAPLADVFMVFARTDPGAEGGHGIT
EEECCCCCCCCCCCCHHHCCCCCHHEEHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEE
AFMVERDAPGLSVGPKDHKMGQAGAWTADVLLADVRVPASAVIGGEDGVGRGYATAMRCL
EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHEEECCCCCCCCHHHHHHHHH
AHGRIHIAALCVGLAQRLVDESVSYAATRVQGGGVIGTHQLVQGLLADSATDLYAARALV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECHHHHHHHHHHCCHHHHHHHHHHH
LDVAARFDDGSDTRIGPSCAKYFASEAVGRVADRAVQIHGGAGYMRGVPVERFYRDARLF
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHE
RIYEGTSQIQQIVIARQLLRDAGVR
EEECCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]