| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315688
Identifier: 158315688
GI number: 158315688
Start: 4664403
End: 4664933
Strand: Reverse
Name: 158315688
Synonym: Franean1_3900
Alternate gene names: NA
Gene position: 4664933-4664403 (Counterclockwise)
Preceding gene: 158315689
Following gene: 158315679
Centisome position: 51.94
GC content: 73.45
Gene sequence:
>531_bases ATGGGCTCCGGCGTCCCGCTCCTCACCGACGCGTTCGGGCGGATCCGGGAGATCGTGCACGACGTCGTCAGCGGGCTGAC CCCGGACGAGCTGAACCACCGGCTGGACGGCCGGGCCAACTCGATCACCTGGCTCGTCTGGCACCTCACCCGGGTGCAGG ACGACCACGTCGCCGCCGCGGCCGGGTCGGAGCAGGTCTGGTCCGCGGGCGGCTGGGAGCAGCGGTTCGGGCTGGCCGTA CCCACCGGGCCGCAGGCCGGGTACCGGGCGATCGGCTACGGCCACAGCTCGGCCGACGTCGACGCGGTACGCGTCACCGA TCCCGGTCTGCTGCTCGGCTACCACGACGCCGTCCACGAGCAGACCGTCCGCTACCTCGGACAGCTGCGTGACGCGGACT TCGACCGGATCGTGGACGAGGCGTGGGACCCGCCCGTCACGCTCGGCGTGCGGCTGGTGAGCGTCGTCGCGGACGACCTC CAGCATGCCGGCCAGGCGGCGTTCGTCCGCGGGCTCGTCCACCCCGGCTGA
Upstream 100 bases:
>100_bases GCCCGCGCGGCCGGCGCGCGGCGGCCGCCCGCGCCGAACACGACGAACCGGCCGGCGGAGGTGCTCCCCTCCGCCGCCGG CGGCCTCGTACAGTACTGCG
Downstream 100 bases:
>100_bases CCGCCCGGCGCTCCCGGCACTCCGGGCTGACCGCCCGGCTGACCGGCACTCCCGGCCGTCAGCCCGCCGGGGTCAGCCGG GGCCCCGGGGTGAAGGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MGSGVPLLTDAFGRIREIVHDVVSGLTPDELNHRLDGRANSITWLVWHLTRVQDDHVAAAAGSEQVWSAGGWEQRFGLAV PTGPQAGYRAIGYGHSSADVDAVRVTDPGLLLGYHDAVHEQTVRYLGQLRDADFDRIVDEAWDPPVTLGVRLVSVVADDL QHAGQAAFVRGLVHPG
Sequences:
>Translated_176_residues MGSGVPLLTDAFGRIREIVHDVVSGLTPDELNHRLDGRANSITWLVWHLTRVQDDHVAAAAGSEQVWSAGGWEQRFGLAV PTGPQAGYRAIGYGHSSADVDAVRVTDPGLLLGYHDAVHEQTVRYLGQLRDADFDRIVDEAWDPPVTLGVRLVSVVADDL QHAGQAAFVRGLVHPG >Mature_175_residues GSGVPLLTDAFGRIREIVHDVVSGLTPDELNHRLDGRANSITWLVWHLTRVQDDHVAAAAGSEQVWSAGGWEQRFGLAVP TGPQAGYRAIGYGHSSADVDAVRVTDPGLLLGYHDAVHEQTVRYLGQLRDADFDRIVDEAWDPPVTLGVRLVSVVADDLQ HAGQAAFVRGLVHPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19015; Mature: 18884
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSGVPLLTDAFGRIREIVHDVVSGLTPDELNHRLDGRANSITWLVWHLTRVQDDHVAAA CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEHHHHCCCHHHHH AGSEQVWSAGGWEQRFGLAVPTGPQAGYRAIGYGHSSADVDAVRVTDPGLLLGYHDAVHE CCCCHHHCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCEEECHHHHHHH QTVRYLGQLRDADFDRIVDEAWDPPVTLGVRLVSVVADDLQHAGQAAFVRGLVHPG HHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure GSGVPLLTDAFGRIREIVHDVVSGLTPDELNHRLDGRANSITWLVWHLTRVQDDHVAAA CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEHHHHCCCHHHHH AGSEQVWSAGGWEQRFGLAVPTGPQAGYRAIGYGHSSADVDAVRVTDPGLLLGYHDAVHE CCCCHHHCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCEEECHHHHHHH QTVRYLGQLRDADFDRIVDEAWDPPVTLGVRLVSVVADDLQHAGQAAFVRGLVHPG HHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA