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The map label for this gene is ssuC [C]

Identifier: 158315679

GI number: 158315679

Start: 4655014

End: 4655916

Strand: Reverse

Name: ssuC [C]

Synonym: Franean1_3891

Alternate gene names: 158315679

Gene position: 4655916-4655014 (Counterclockwise)

Preceding gene: 158315688

Following gene: 158315673

Centisome position: 51.84

GC content: 71.21

Gene sequence:

>903_bases
GTGCCAGACGGGGACGACGGCGGACTCACAGCGCCAGGGGAGCCGGGGGTGGCCAGCCTGGAGCGGCCGGGCGTGGCCGG
CCCGGCGGCCCGGCCACGGGGGCGGGCGGTCAGTCTCGCCGCCCGAGCCACACGGACTGCGCTGCCGCCGTTCGCGGTGT
TCGCGGCCGTGATCGGCATCTGGTACGCCGTCACCTACTGGTTCCTCGCCCCCCGCCGCCGGTTCCTGCTCCCGCCGCCG
CACGAGGTCGTGTCCGAGGGCTTCCTGGACGGCCGCACCGCCGACGAGATCCTCACCGCGCTCGGCGGGACGGCGAAGGT
CGCGCTCACCGGCCTCGCGATCGCCGCGGGCATCGGAATCCTCTCGGCGATTCTCATGTCACAGGCCCGCTGGATCGAGA
ACTCGTTCTACCCCTGGGCCATCCTCCTGCAGACGATCCCGATTCTGGCCATCGTCCCGCTGATCGGATTCTGGCTCGGC
TACGGATTCTGGTCCCGGACGGTCGTGTGCGTCGTGATCTCGATGTTCCCGATGATCACCAACACGCTCTTCGGCATCCA
GTCCGTCGACGCCGGCCATCACGACCTGTTCACGCTGCGCCGGGTCGGGCGGTGGCGCCGACTGCTCCGCCTCGAGCTCC
CGAGCGCACTGCCCGCGATCTTCGTCGGCCTGCGCATCTCGGCCGGCCTCGCGGTGATCGGCGCGATCGTCGGCGACTTC
TTCTTCCGCCGCGGCGACGTCGGCATCGGCGCGCTCATCGACAACTACACCCGCGACCTGTCCTCCGGGCCCCTGTTCGC
CGCGATCATCGTCTCGGCGCTGTTCGGCCTGGTCGTGTTCTGGCTCTTCGGCCTGGCCGCCCGTCTGGTCGTCGGCCCGT
GGCACGACTCCGCCCGCGGCTAA

Upstream 100 bases:

>100_bases
TGCGCCGCCGCGGCACCTAGGATTCGGACGAGGCTCGGCGATCAGGGGGAAATCCCCACGAACGGGCGTCGCGACAAGAT
CTCGACTGAAAGGTTCCTAG

Downstream 100 bases:

>100_bases
CGCCGCACGCCCGGTGCGGCCGGTAGGCCCGGAGCGGGCGTCGGGCCAGGATCCGCGGCCTCCAACCAGTACCGCCGGCG
CTGGAAGGCATAGGTGGGCA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MPDGDDGGLTAPGEPGVASLERPGVAGPAARPRGRAVSLAARATRTALPPFAVFAAVIGIWYAVTYWFLAPRRRFLLPPP
HEVVSEGFLDGRTADEILTALGGTAKVALTGLAIAAGIGILSAILMSQARWIENSFYPWAILLQTIPILAIVPLIGFWLG
YGFWSRTVVCVVISMFPMITNTLFGIQSVDAGHHDLFTLRRVGRWRRLLRLELPSALPAIFVGLRISAGLAVIGAIVGDF
FFRRGDVGIGALIDNYTRDLSSGPLFAAIIVSALFGLVVFWLFGLAARLVVGPWHDSARG

Sequences:

>Translated_300_residues
MPDGDDGGLTAPGEPGVASLERPGVAGPAARPRGRAVSLAARATRTALPPFAVFAAVIGIWYAVTYWFLAPRRRFLLPPP
HEVVSEGFLDGRTADEILTALGGTAKVALTGLAIAAGIGILSAILMSQARWIENSFYPWAILLQTIPILAIVPLIGFWLG
YGFWSRTVVCVVISMFPMITNTLFGIQSVDAGHHDLFTLRRVGRWRRLLRLELPSALPAIFVGLRISAGLAVIGAIVGDF
FFRRGDVGIGALIDNYTRDLSSGPLFAAIIVSALFGLVVFWLFGLAARLVVGPWHDSARG
>Mature_299_residues
PDGDDGGLTAPGEPGVASLERPGVAGPAARPRGRAVSLAARATRTALPPFAVFAAVIGIWYAVTYWFLAPRRRFLLPPPH
EVVSEGFLDGRTADEILTALGGTAKVALTGLAIAAGIGILSAILMSQARWIENSFYPWAILLQTIPILAIVPLIGFWLGY
GFWSRTVVCVVISMFPMITNTLFGIQSVDAGHHDLFTLRRVGRWRRLLRLELPSALPAIFVGLRISAGLAVIGAIVGDFF
FRRGDVGIGALIDNYTRDLSSGPLFAAIIVSALFGLVVFWLFGLAARLVVGPWHDSARG

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=201, Percent_Identity=28.3582089552239, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32128; Mature: 31997

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDGDDGGLTAPGEPGVASLERPGVAGPAARPRGRAVSLAARATRTALPPFAVFAAVIGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
WYAVTYWFLAPRRRFLLPPPHEVVSEGFLDGRTADEILTALGGTAKVALTGLAIAAGIGI
HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
LSAILMSQARWIENSFYPWAILLQTIPILAIVPLIGFWLGYGFWSRTVVCVVISMFPMIT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTLFGIQSVDAGHHDLFTLRRVGRWRRLLRLELPSALPAIFVGLRISAGLAVIGAIVGDF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FFRRGDVGIGALIDNYTRDLSSGPLFAAIIVSALFGLVVFWLFGLAARLVVGPWHDSARG
HHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PDGDDGGLTAPGEPGVASLERPGVAGPAARPRGRAVSLAARATRTALPPFAVFAAVIGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]