Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315600

Identifier: 158315600

GI number: 158315600

Start: 4523468

End: 4524958

Strand: Reverse

Name: 158315600

Synonym: Franean1_3809

Alternate gene names: NA

Gene position: 4524958-4523468 (Counterclockwise)

Preceding gene: 158315605

Following gene: 158315598

Centisome position: 50.38

GC content: 74.11

Gene sequence:

>1491_bases
ATGGCGACGTACACCGCCGCTCAGATCTACGCTTACGCCCGGGCCGCCGGCTTCACCTCGGACCAGGCCGTGACGATGAC
CGCCGTCGCGCTGGCCGAGTCGGGCGGCAACGGGATGGCGCACGCCACCCGGGGCGAGGACTCGCGCGGGCTCTGGCAGA
TCAACATGAACGCCCACAAGCAATGGGCGCACCTGGACGCCTCTGACCCCGCGGTCAACGCCCGGATGGCCTACGAGGTC
TCCCGCCAGGGCCGGGACATCTCCCCCTGGACGGTCACCCACGGCGGCGCGGATGCCCGCTACCTGGACTACCGCGCGCA
GGCGCAGCGGGCCGCGATCGAGGCCGGGGACGCGGGCGCGCAGGGAAACTGGTCGGGGACCGAGGGCTACGGGCACGCGG
TCGCCGCCGGCGGGGGTGGGAGTGGGGGCGACCACACGGCCGGCTTCGCGGCGAGCGGGTACCCGACGTACTCGGCCGGC
ACCGGCGGGAACGGCCCGGGCGGCGCGCAGGTCGGCGAGACCACCCGGCATTTCCTCGACGCCGCGCTCGCTCAGGCCGG
CGACCGCTACGTGTACGGCGCCGAGGCGCAGCTGAACGACGCGGACCCCGACGCCTTCGACTGCTCGGAGCTGACCCAGT
GGGCGGCGGCGCAGGCCGGCGTCGAGATCCCCGACGGCGCCGCGAACCAGTACGAGGCCCTGCGCACCGAGGGCCAGGAG
GTCTCCGTCGACGAGGCCCTGCGCACGCCCGGCGCGCTGCTGTTCCACGCCGACGCGAGCGGCTACGTCAGCCACGTCGC
GATCAGCCTCGGTGACGGGCGGACGATCGAAGCCCGCAACTCCCGCCTCGGCGTCGGGGTGTTCGACGGACGGGAGAACT
GGCTCAACCGGGCGGCCGTCCTCCCCGGACTGTCCGGGGAGGTCGGCGCGGGCGCGTTCGCGGCCGGGCCCGGAACCGGC
CTCGGGGCCGGGGGGGCCGCTGACGGTACCGACAGCGACGCGGACGGGCTCACCGACGCCCTGGAAGCGTCGCTCGGCAG
CAACGCCCATGAGGTGGACAGCGACAGCGACGGCTTGTCCGACTCCTACGAACTGCTGCGCGTGCACTCGGACGTGATGT
CGGCGGACACCGACCACGACGGTCTGGCGGACGCGCTCGATCTGGCCTCCGGCTTCGACCCGACGAACGCGGACAGCACC
GGCACCGGTCGTCTGGACGGGGCGACCGGCGAGGCGGCCAGCCTCGACACCGACGACGACGGGCTCGCCGACGCGCTCGA
GCGGGTCCTCGGCACCGACTCGACTCTGGCCGACAGCGATCACGACGGGGTGACCGACGGCGCGGAGCACCTGAACCGCA
TGGACCCGCTCGACCTGAACGACGTGGGGTCGCTGGTGCACAGCGCGGACACCGGCGCTGGGACGGGAACCGACCTCGGT
GCCACCCACCCCCCGGGCGGCACCGACCTCGACGGCACCACCCACCTCTGA

Upstream 100 bases:

>100_bases
CGGCCGCGGCTGGCTGCCCGATCGGGCAGCCAGCCGGGGGCGGAACGTCTGCGCGACGGGCCGTTCCCCGCCCCCCGGTC
CACCGAGTACTGTCGCGATC

Downstream 100 bases:

>100_bases
CGGCGGCGACGGCGATGGGGACCAGGACGACCCGCCCGGATTCAGAGCAGGCCGTGTCGGAAGGCGTAGGCCACCGCGTG
GGAACGGTTACGCAGCCCGA

Product: NLP/P60 protein

Products: NA

Alternate protein names: Cell Wall-Associated Hydrolase-Like Protein

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MATYTAAQIYAYARAAGFTSDQAVTMTAVALAESGGNGMAHATRGEDSRGLWQINMNAHKQWAHLDASDPAVNARMAYEV
SRQGRDISPWTVTHGGADARYLDYRAQAQRAAIEAGDAGAQGNWSGTEGYGHAVAAGGGGSGGDHTAGFAASGYPTYSAG
TGGNGPGGAQVGETTRHFLDAALAQAGDRYVYGAEAQLNDADPDAFDCSELTQWAAAQAGVEIPDGAANQYEALRTEGQE
VSVDEALRTPGALLFHADASGYVSHVAISLGDGRTIEARNSRLGVGVFDGRENWLNRAAVLPGLSGEVGAGAFAAGPGTG
LGAGGAADGTDSDADGLTDALEASLGSNAHEVDSDSDGLSDSYELLRVHSDVMSADTDHDGLADALDLASGFDPTNADST
GTGRLDGATGEAASLDTDDDGLADALERVLGTDSTLADSDHDGVTDGAEHLNRMDPLDLNDVGSLVHSADTGAGTGTDLG
ATHPPGGTDLDGTTHL

Sequences:

>Translated_496_residues
MATYTAAQIYAYARAAGFTSDQAVTMTAVALAESGGNGMAHATRGEDSRGLWQINMNAHKQWAHLDASDPAVNARMAYEV
SRQGRDISPWTVTHGGADARYLDYRAQAQRAAIEAGDAGAQGNWSGTEGYGHAVAAGGGGSGGDHTAGFAASGYPTYSAG
TGGNGPGGAQVGETTRHFLDAALAQAGDRYVYGAEAQLNDADPDAFDCSELTQWAAAQAGVEIPDGAANQYEALRTEGQE
VSVDEALRTPGALLFHADASGYVSHVAISLGDGRTIEARNSRLGVGVFDGRENWLNRAAVLPGLSGEVGAGAFAAGPGTG
LGAGGAADGTDSDADGLTDALEASLGSNAHEVDSDSDGLSDSYELLRVHSDVMSADTDHDGLADALDLASGFDPTNADST
GTGRLDGATGEAASLDTDDDGLADALERVLGTDSTLADSDHDGVTDGAEHLNRMDPLDLNDVGSLVHSADTGAGTGTDLG
ATHPPGGTDLDGTTHL
>Mature_495_residues
ATYTAAQIYAYARAAGFTSDQAVTMTAVALAESGGNGMAHATRGEDSRGLWQINMNAHKQWAHLDASDPAVNARMAYEVS
RQGRDISPWTVTHGGADARYLDYRAQAQRAAIEAGDAGAQGNWSGTEGYGHAVAAGGGGSGGDHTAGFAASGYPTYSAGT
GGNGPGGAQVGETTRHFLDAALAQAGDRYVYGAEAQLNDADPDAFDCSELTQWAAAQAGVEIPDGAANQYEALRTEGQEV
SVDEALRTPGALLFHADASGYVSHVAISLGDGRTIEARNSRLGVGVFDGRENWLNRAAVLPGLSGEVGAGAFAAGPGTGL
GAGGAADGTDSDADGLTDALEASLGSNAHEVDSDSDGLSDSYELLRVHSDVMSADTDHDGLADALDLASGFDPTNADSTG
TGRLDGATGEAASLDTDDDGLADALERVLGTDSTLADSDHDGVTDGAEHLNRMDPLDLNDVGSLVHSADTGAGTGTDLGA
THPPGGTDLDGTTHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50157; Mature: 50025

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYTAAQIYAYARAAGFTSDQAVTMTAVALAESGGNGMAHATRGEDSRGLWQINMNAHK
CCCCHHHHHHHHHHHCCCCCCCHHEEEEEEHHHCCCCCCEECCCCCCCCCEEEEECCCCC
QWAHLDASDPAVNARMAYEVSRQGRDISPWTVTHGGADARYLDYRAQAQRAAIEAGDAGA
CEEECCCCCCCCCHHEEEHHHHCCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHCCCCCC
QGNWSGTEGYGHAVAAGGGGSGGDHTAGFAASGYPTYSAGTGGNGPGGAQVGETTRHFLD
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AALAQAGDRYVYGAEAQLNDADPDAFDCSELTQWAAAQAGVEIPDGAANQYEALRTEGQE
HHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCC
VSVDEALRTPGALLFHADASGYVSHVAISLGDGRTIEARNSRLGVGVFDGRENWLNRAAV
CCHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCEEEECCCEEEEEEECCHHHHHHHHHH
LPGLSGEVGAGAFAAGPGTGLGAGGAADGTDSDADGLTDALEASLGSNAHEVDSDSDGLS
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
DSYELLRVHSDVMSADTDHDGLADALDLASGFDPTNADSTGTGRLDGATGEAASLDTDDD
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GLADALERVLGTDSTLADSDHDGVTDGAEHLNRMDPLDLNDVGSLVHSADTGAGTGTDLG
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCC
ATHPPGGTDLDGTTHL
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATYTAAQIYAYARAAGFTSDQAVTMTAVALAESGGNGMAHATRGEDSRGLWQINMNAHK
CCCHHHHHHHHHHHCCCCCCCHHEEEEEEHHHCCCCCCEECCCCCCCCCEEEEECCCCC
QWAHLDASDPAVNARMAYEVSRQGRDISPWTVTHGGADARYLDYRAQAQRAAIEAGDAGA
CEEECCCCCCCCCHHEEEHHHHCCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHCCCCCC
QGNWSGTEGYGHAVAAGGGGSGGDHTAGFAASGYPTYSAGTGGNGPGGAQVGETTRHFLD
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AALAQAGDRYVYGAEAQLNDADPDAFDCSELTQWAAAQAGVEIPDGAANQYEALRTEGQE
HHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCC
VSVDEALRTPGALLFHADASGYVSHVAISLGDGRTIEARNSRLGVGVFDGRENWLNRAAV
CCHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCEEEECCCEEEEEEECCHHHHHHHHHH
LPGLSGEVGAGAFAAGPGTGLGAGGAADGTDSDADGLTDALEASLGSNAHEVDSDSDGLS
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
DSYELLRVHSDVMSADTDHDGLADALDLASGFDPTNADSTGTGRLDGATGEAASLDTDDD
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GLADALERVLGTDSTLADSDHDGVTDGAEHLNRMDPLDLNDVGSLVHSADTGAGTGTDLG
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCC
ATHPPGGTDLDGTTHL
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA