| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315582
Identifier: 158315582
GI number: 158315582
Start: 4494953
End: 4497442
Strand: Reverse
Name: 158315582
Synonym: Franean1_3791
Alternate gene names: NA
Gene position: 4497442-4494953 (Counterclockwise)
Preceding gene: 158315583
Following gene: 158315575
Centisome position: 50.07
GC content: 67.83
Gene sequence:
>2490_bases ATGGCCGTCAGGGGAATGCTGGCGCGGCGCCAGTCCACATCTCCTCCCCCTGCTGGCGCGAAGCCGGATGCCGGCCCGGG GGCGAGCATCCGGCTTCGGAACGCGTCTGGCGTCCCGCAGGTCCAGCGCGAGGACGTCCCTGCCGTGACGACGACCCCGA AGGAGCTCATTTCGAAGTACACGACGCTCCTCATGCTCGACGAGGCGGGGCTCGGGAAGGATCTCGCCGCGCGCGTGGTG GAAAGACGGGACGTCATGCTCACTCACGGGGTGTTCGACAACCTCAGGACCACCGACCGCGACGATGTCGCCGAGGAACT GGCCCGGTCTGCCGGCAGCAGGCTCCGGGAGGTGGACGAGGGACTCCGGATCCGCCTCATCCGGGAGATGCTCGACACCG TCGTCGACGAGGACGCGGAAAAGCAGGTCACGGCGGTCTGGCTGAGCTTCGAGAACGAAGGGAAGCTGGGAACGGTCATC ACCAACCAGCGCGCCCTGTGGGATCGCTCGCTCAGCGAGTGCACGCCGCTGAGCGACCGTTTCGCCGCCTACACGGCAGC GTTCGGCATGGATATCCTGAAGGCAGCCGGCGTCTATCTCGACGAGAACCGAAAGATCACGGAGAAGGAAGCCAAGGGGT TCGGGCTTAATCTCGGTGGTGCGGCCGAGACGGCACCGCCGGAGCAGGCGGACGCCTATCTCGACGAGGTGCGCAAGGCG GCCAGGGTCGTGGTGCAGCTGCAGGCCCTGACGTATGAGCTGCGGCTGGTGCCTGTCGGCTATCGCAGCACCCCCGAGCT CCAACAGAAGCTTTCGGCGGACGCCAGGACAGACGCGGAGGCCTACAAGGCCGTCACCGCGCCGCCCCCAGACACGCTAC GGAGGTACGGGCAGCCGGAGCTCTTCGATCCCGCCCGGCGCCCCGACTACCCGCCGACCGGCAAGGAGGAGCCGGAGATG GCGCAGTGGACGGAGGCGGAGTCACACCACAGCAAGATCGGGGCGCTGATCGCCGAGTACGCCCGAAACTACCCCGCCGT CTACGCGTCGATCACGCAGGGAAACATCGGGGAGCTGGCCGAGGCGACGGACGCAGGCAAGGCCCGCGGACTGGTGGAGA ACATTCTCCGGAAGACGCTTACGGCGATAGAAGAGACCAGAAGCAGACTCGGGACGGGTATCACACACTACGATCTCGCC CCGATTCAGCAGCAGCTGTTTACGAACACCCTCGCCACGCCGGCCAAAGCGTCCGTCAACTGGCAGGATCCGCTGTACGC GGCGCTCGGGCGCATGGATCTGGAAAAGCAGAAGGCGAAGGACTTCTGGACCGACCTGGGACTCAATATGGTGTCGGCGT TCGCGCTGATCGCCGCGCCGTTCACCGGAGGGATGACGGCCGCCGTTCTGGTCGGAGCCGGCCTCGCCGTCGGCGCCGGC ATGGCCGCCGCGAGCTGGGACCGCTATCTCCAGCTCCGCCCACTCGAGAACGCCGCGATCAGGGACGACCTGTCCTTCGT CCAGAAAGGAGCCGTCGACGCGGCGCTCCTCGAGGCGACGGTCGCGACGGTCGGCGTGTTCCTGGACGCTCTGGGTGTGC ATGGGGACATGAAGCGGGCCGCCGGCGTCAACCGGGTGAAGGCACTGGCGGACCTCCACGGGGCGGTCGAGGCGCAGGAG GCCGCCGCGCAGGCGCGCATGAAGATGCAGGCGGAGGGTCTGAAGGACGCTGGCGCGGCCACCGCGGGAGCGGCGGCCGC GATCGGGGCCCACGAGCTCGAGGACGCCATCCCGGAGCCCGACATCGAGGTGAGGGCGGGCGGGCTGGAGGTCGATCTGC CCTCGGTCGCAGCCCCGGCACAACGTAGCGTGATCAGCACCAGAAGTGTTCAGCGCGCGCCGAACAAGCAGCTCGCAGCC GTCACTGCGAAAATGGCCGCGATCGATACCGCGAGAGATGTTCCGCGCGACTGGGGAAACCGCTTCGAGCTGTCGGTGGT GGCGAGCGTTCTCCGCGGCGAGGTCCCGGAGATGTCCGGTGTGGTCCACGCGTTTCAGGCGCAGCACAACGCGAGTGGAC ACGGGATCGACATCATCGCCGTCGGGACCGGCTCCAGGGGAAGGCTCAAGTTCTGGCAGATCGAGTGCAAGTGGGCCGGG CCGGAATCGGGCTACCCGCGGCACCTCGGCGGATCACGCGCCGGCATCCAGACCAGCGCCGGATGGACCAAGGACAACTT CGTCAGATGGTGGGAGGCCGCTCCCCCGGGGGAGAAACGGCAGCTCCTCAACGCCGTGAAGGCAGCGAACGGCGGCCGCG CGATCGAGGTGGAGAAGCTGACGGATCTGATCAGCAGGGCTGAGGTGATCATAGCCGCGCCGCTCGGCGCCGGAGCCGCC GGCGTGATGCGCAGGATATGGGGCGAGATGGGTGCGCTCACGCGGTTCGGCGGCCGGAAGATGAGCTACCGGGAGTTCCG ACCGAGATGA
Upstream 100 bases:
>100_bases CCGACGCGTGAAGGCGCCCGAGGGGGCGGACGCGTGTGGAGGGAATGCACCGAACGTCGCGGCCCGGGCAGTCCTGCGCC TGCAGACGGAGGCCGGAAAC
Downstream 100 bases:
>100_bases CGCCTCAAGCCGGTCACACCTTCCGCCTGTTCACGCAGACCCTCGGCTGGACCGATCAGCCGGTGCGCCGCGCCCGCACG TGACCGAGTACCGGGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 829; Mature: 828
Protein sequence:
>829_residues MAVRGMLARRQSTSPPPAGAKPDAGPGASIRLRNASGVPQVQREDVPAVTTTPKELISKYTTLLMLDEAGLGKDLAARVV ERRDVMLTHGVFDNLRTTDRDDVAEELARSAGSRLREVDEGLRIRLIREMLDTVVDEDAEKQVTAVWLSFENEGKLGTVI TNQRALWDRSLSECTPLSDRFAAYTAAFGMDILKAAGVYLDENRKITEKEAKGFGLNLGGAAETAPPEQADAYLDEVRKA ARVVVQLQALTYELRLVPVGYRSTPELQQKLSADARTDAEAYKAVTAPPPDTLRRYGQPELFDPARRPDYPPTGKEEPEM AQWTEAESHHSKIGALIAEYARNYPAVYASITQGNIGELAEATDAGKARGLVENILRKTLTAIEETRSRLGTGITHYDLA PIQQQLFTNTLATPAKASVNWQDPLYAALGRMDLEKQKAKDFWTDLGLNMVSAFALIAAPFTGGMTAAVLVGAGLAVGAG MAAASWDRYLQLRPLENAAIRDDLSFVQKGAVDAALLEATVATVGVFLDALGVHGDMKRAAGVNRVKALADLHGAVEAQE AAAQARMKMQAEGLKDAGAATAGAAAAIGAHELEDAIPEPDIEVRAGGLEVDLPSVAAPAQRSVISTRSVQRAPNKQLAA VTAKMAAIDTARDVPRDWGNRFELSVVASVLRGEVPEMSGVVHAFQAQHNASGHGIDIIAVGTGSRGRLKFWQIECKWAG PESGYPRHLGGSRAGIQTSAGWTKDNFVRWWEAAPPGEKRQLLNAVKAANGGRAIEVEKLTDLISRAEVIIAAPLGAGAA GVMRRIWGEMGALTRFGGRKMSYREFRPR
Sequences:
>Translated_829_residues MAVRGMLARRQSTSPPPAGAKPDAGPGASIRLRNASGVPQVQREDVPAVTTTPKELISKYTTLLMLDEAGLGKDLAARVV ERRDVMLTHGVFDNLRTTDRDDVAEELARSAGSRLREVDEGLRIRLIREMLDTVVDEDAEKQVTAVWLSFENEGKLGTVI TNQRALWDRSLSECTPLSDRFAAYTAAFGMDILKAAGVYLDENRKITEKEAKGFGLNLGGAAETAPPEQADAYLDEVRKA ARVVVQLQALTYELRLVPVGYRSTPELQQKLSADARTDAEAYKAVTAPPPDTLRRYGQPELFDPARRPDYPPTGKEEPEM AQWTEAESHHSKIGALIAEYARNYPAVYASITQGNIGELAEATDAGKARGLVENILRKTLTAIEETRSRLGTGITHYDLA PIQQQLFTNTLATPAKASVNWQDPLYAALGRMDLEKQKAKDFWTDLGLNMVSAFALIAAPFTGGMTAAVLVGAGLAVGAG MAAASWDRYLQLRPLENAAIRDDLSFVQKGAVDAALLEATVATVGVFLDALGVHGDMKRAAGVNRVKALADLHGAVEAQE AAAQARMKMQAEGLKDAGAATAGAAAAIGAHELEDAIPEPDIEVRAGGLEVDLPSVAAPAQRSVISTRSVQRAPNKQLAA VTAKMAAIDTARDVPRDWGNRFELSVVASVLRGEVPEMSGVVHAFQAQHNASGHGIDIIAVGTGSRGRLKFWQIECKWAG PESGYPRHLGGSRAGIQTSAGWTKDNFVRWWEAAPPGEKRQLLNAVKAANGGRAIEVEKLTDLISRAEVIIAAPLGAGAA GVMRRIWGEMGALTRFGGRKMSYREFRPR >Mature_828_residues AVRGMLARRQSTSPPPAGAKPDAGPGASIRLRNASGVPQVQREDVPAVTTTPKELISKYTTLLMLDEAGLGKDLAARVVE RRDVMLTHGVFDNLRTTDRDDVAEELARSAGSRLREVDEGLRIRLIREMLDTVVDEDAEKQVTAVWLSFENEGKLGTVIT NQRALWDRSLSECTPLSDRFAAYTAAFGMDILKAAGVYLDENRKITEKEAKGFGLNLGGAAETAPPEQADAYLDEVRKAA RVVVQLQALTYELRLVPVGYRSTPELQQKLSADARTDAEAYKAVTAPPPDTLRRYGQPELFDPARRPDYPPTGKEEPEMA QWTEAESHHSKIGALIAEYARNYPAVYASITQGNIGELAEATDAGKARGLVENILRKTLTAIEETRSRLGTGITHYDLAP IQQQLFTNTLATPAKASVNWQDPLYAALGRMDLEKQKAKDFWTDLGLNMVSAFALIAAPFTGGMTAAVLVGAGLAVGAGM AAASWDRYLQLRPLENAAIRDDLSFVQKGAVDAALLEATVATVGVFLDALGVHGDMKRAAGVNRVKALADLHGAVEAQEA AAQARMKMQAEGLKDAGAATAGAAAAIGAHELEDAIPEPDIEVRAGGLEVDLPSVAAPAQRSVISTRSVQRAPNKQLAAV TAKMAAIDTARDVPRDWGNRFELSVVASVLRGEVPEMSGVVHAFQAQHNASGHGIDIIAVGTGSRGRLKFWQIECKWAGP ESGYPRHLGGSRAGIQTSAGWTKDNFVRWWEAAPPGEKRQLLNAVKAANGGRAIEVEKLTDLISRAEVIIAAPLGAGAAG VMRRIWGEMGALTRFGGRKMSYREFRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89119; Mature: 88988
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRGMLARRQSTSPPPAGAKPDAGPGASIRLRNASGVPQVQREDVPAVTTTPKELISKY CCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHH TTLLMLDEAGLGKDLAARVVERRDVMLTHGVFDNLRTTDRDDVAEELARSAGSRLREVDE HHEEEEECCCCCHHHHHHHHHHHCEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH GLRIRLIREMLDTVVDEDAEKQVTAVWLSFENEGKLGTVITNQRALWDRSLSECTPLSDR HHHHHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCEEEEEECCHHHHHCCHHHCCCCHHH FAAYTAAFGMDILKAAGVYLDENRKITEKEAKGFGLNLGGAAETAPPEQADAYLDEVRKA HHHHHHHHHHHHHHHCCCEECCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ARVVVQLQALTYELRLVPVGYRSTPELQQKLSADARTDAEAYKAVTAPPPDTLRRYGQPE HHHHHHHHHHEEEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHCCCCC LFDPARRPDYPPTGKEEPEMAQWTEAESHHSKIGALIAEYARNYPAVYASITQGNIGELA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH EATDAGKARGLVENILRKTLTAIEETRSRLGTGITHYDLAPIQQQLFTNTLATPAKASVN HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHCCCCCCCCC WQDPLYAALGRMDLEKQKAKDFWTDLGLNMVSAFALIAAPFTGGMTAAVLVGAGLAVGAG CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC MAAASWDRYLQLRPLENAAIRDDLSFVQKGAVDAALLEATVATVGVFLDALGVHGDMKRA HHHHHHHHHEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AGVNRVKALADLHGAVEAQEAAAQARMKMQAEGLKDAGAATAGAAAAIGAHELEDAIPEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCC DIEVRAGGLEVDLPSVAAPAQRSVISTRSVQRAPNKQLAAVTAKMAAIDTARDVPRDWGN CCEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCC RFELSVVASVLRGEVPEMSGVVHAFQAQHNASGHGIDIIAVGTGSRGRLKFWQIECKWAG CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEECC PESGYPRHLGGSRAGIQTSAGWTKDNFVRWWEAAPPGEKRQLLNAVKAANGGRAIEVEKL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEHHHH TDLISRAEVIIAAPLGAGAAGVMRRIWGEMGALTRFGGRKMSYREFRPR HHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC >Mature Secondary Structure AVRGMLARRQSTSPPPAGAKPDAGPGASIRLRNASGVPQVQREDVPAVTTTPKELISKY CCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHH TTLLMLDEAGLGKDLAARVVERRDVMLTHGVFDNLRTTDRDDVAEELARSAGSRLREVDE HHEEEEECCCCCHHHHHHHHHHHCEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH GLRIRLIREMLDTVVDEDAEKQVTAVWLSFENEGKLGTVITNQRALWDRSLSECTPLSDR HHHHHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCEEEEEECCHHHHHCCHHHCCCCHHH FAAYTAAFGMDILKAAGVYLDENRKITEKEAKGFGLNLGGAAETAPPEQADAYLDEVRKA HHHHHHHHHHHHHHHCCCEECCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ARVVVQLQALTYELRLVPVGYRSTPELQQKLSADARTDAEAYKAVTAPPPDTLRRYGQPE HHHHHHHHHHEEEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHCCCCC LFDPARRPDYPPTGKEEPEMAQWTEAESHHSKIGALIAEYARNYPAVYASITQGNIGELA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH EATDAGKARGLVENILRKTLTAIEETRSRLGTGITHYDLAPIQQQLFTNTLATPAKASVN HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHCCCCCCCCC WQDPLYAALGRMDLEKQKAKDFWTDLGLNMVSAFALIAAPFTGGMTAAVLVGAGLAVGAG CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC MAAASWDRYLQLRPLENAAIRDDLSFVQKGAVDAALLEATVATVGVFLDALGVHGDMKRA HHHHHHHHHEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AGVNRVKALADLHGAVEAQEAAAQARMKMQAEGLKDAGAATAGAAAAIGAHELEDAIPEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCC DIEVRAGGLEVDLPSVAAPAQRSVISTRSVQRAPNKQLAAVTAKMAAIDTARDVPRDWGN CCEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCC RFELSVVASVLRGEVPEMSGVVHAFQAQHNASGHGIDIIAVGTGSRGRLKFWQIECKWAG CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEECC PESGYPRHLGGSRAGIQTSAGWTKDNFVRWWEAAPPGEKRQLLNAVKAANGGRAIEVEKL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEHHHH TDLISRAEVIIAAPLGAGAAGVMRRIWGEMGALTRFGGRKMSYREFRPR HHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA