| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is iolS [H]
Identifier: 158315575
GI number: 158315575
Start: 4487024
End: 4488085
Strand: Reverse
Name: iolS [H]
Synonym: Franean1_3784
Alternate gene names: 158315575
Gene position: 4488085-4487024 (Counterclockwise)
Preceding gene: 158315582
Following gene: 158315574
Centisome position: 49.97
GC content: 73.16
Gene sequence:
>1062_bases ATGAATGGTCCCTGCCGCGGCGTCGCCCGCCGCAGCAGACTGGCGGTCATGACGCAGACGACGATGACGACAAGGCGGCT CGGGGCAACCGGGCCGGAGGTGGGTGCGCTCGGGCTCGGTTGCATGGGCATGTCCGGCATGTACGGGCCAGCCGACGACG ATGAGAGCGTGGCGACGATCCTCGCCGCGGTCGACGCGGGGATGACCCTGCTCGACACCGGCGACTTCTACGGCATGGGA CACAACGAGCTGCTGGTCGGCCGCGCCCTGCGCCAGCTCGACCGGGACGCGGTGACGGTGAGCGTGAAGTTCGGGGCGCT GCGCGACGCGGTCGGCGGCTGGGGTGGTCTCGACGCCCGGCCGGCGGCGCTGCGCAACTTCCTCGCCTACTCGCTGGTGC GCCTGGGCACCGACCATGTGGACGTCTACCGGCCGGCCCGGCTCGACCCCGCCGTGCCGATCGAGGAGACGATCGGTGCC ATCGCCGAGCAGGTCAAGGCCGGTCTGGTCCGGCACATCGGCCTGTCGGAGGTCGGCCCGGAGACGATCCGGCGGGCGGC GGCCGTGCACCCGATCTGCGACCTGCAGATCGAGTACTCGGTGCTTTCCCGCGGCATCGAGGACGAGATCCTGGCGACCT GCCGCGAGCTCGGGATCGCGATCACCGCGTACGGGGTGCTCTCCCGCGGGCTGATCGCCGGCACCGGCCCGTCGGGGCAC AGCAACGACTTCCGGGCACACAGCCCGCGCTTCCAGGGCGCGAACCTCGACCACAACCTGGGGCTCGTCGAGCGGCTGCG GCCGGTCGCCGAGCGCCACGGGATCTCCGTCGCGCAGCTGGCCATCGCCTGGGTCGCCGCCGCAGGTCCGGACGTCATCC CGCTGGTGGGGATGCGCCGGCGCAGCCGCATCGATGACGCCCTGGCCGCCGCGGCCGTCACCCTGTCCGAGCAGGATCTG GCCGACGTCGACCGGGCGGTGCCCGCCGGGTCGGCCGCGGGCGGACGATACGAGGACGCCCAGCTCGCCGCCCTCGACAG CGAGCGTCCCGCCGAGCGCTGA
Upstream 100 bases:
>100_bases TGCGCGCGGCGCCGGCGCAGGAAGTCGGCGAGCCCGGAGCGATCCATGCCACCAGTGTTCCCCACGCCCGGCAGCCGAGC CAGGGACCGGCGATCCCACG
Downstream 100 bases:
>100_bases CGCGGCCCCGCCAAGCCCGCCCACGCACAGGTGGTGCACAGGGAACGCACAGCGTAGGCATCGCCGGGCCCGCCATGATC GAGCCATCAGGTCAGCCGAT
Product: aldo/keto reductase
Products: NA
Alternate protein names: AKR11A; Vegetative protein 147; VEG147 [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MNGPCRGVARRSRLAVMTQTTMTTRRLGATGPEVGALGLGCMGMSGMYGPADDDESVATILAAVDAGMTLLDTGDFYGMG HNELLVGRALRQLDRDAVTVSVKFGALRDAVGGWGGLDARPAALRNFLAYSLVRLGTDHVDVYRPARLDPAVPIEETIGA IAEQVKAGLVRHIGLSEVGPETIRRAAAVHPICDLQIEYSVLSRGIEDEILATCRELGIAITAYGVLSRGLIAGTGPSGH SNDFRAHSPRFQGANLDHNLGLVERLRPVAERHGISVAQLAIAWVAAAGPDVIPLVGMRRRSRIDDALAAAAVTLSEQDL ADVDRAVPAGSAAGGRYEDAQLAALDSERPAER
Sequences:
>Translated_353_residues MNGPCRGVARRSRLAVMTQTTMTTRRLGATGPEVGALGLGCMGMSGMYGPADDDESVATILAAVDAGMTLLDTGDFYGMG HNELLVGRALRQLDRDAVTVSVKFGALRDAVGGWGGLDARPAALRNFLAYSLVRLGTDHVDVYRPARLDPAVPIEETIGA IAEQVKAGLVRHIGLSEVGPETIRRAAAVHPICDLQIEYSVLSRGIEDEILATCRELGIAITAYGVLSRGLIAGTGPSGH SNDFRAHSPRFQGANLDHNLGLVERLRPVAERHGISVAQLAIAWVAAAGPDVIPLVGMRRRSRIDDALAAAAVTLSEQDL ADVDRAVPAGSAAGGRYEDAQLAALDSERPAER >Mature_353_residues MNGPCRGVARRSRLAVMTQTTMTTRRLGATGPEVGALGLGCMGMSGMYGPADDDESVATILAAVDAGMTLLDTGDFYGMG HNELLVGRALRQLDRDAVTVSVKFGALRDAVGGWGGLDARPAALRNFLAYSLVRLGTDHVDVYRPARLDPAVPIEETIGA IAEQVKAGLVRHIGLSEVGPETIRRAAAVHPICDLQIEYSVLSRGIEDEILATCRELGIAITAYGVLSRGLIAGTGPSGH SNDFRAHSPRFQGANLDHNLGLVERLRPVAERHGISVAQLAIAWVAAAGPDVIPLVGMRRRSRIDDALAAAAVTLSEQDL ADVDRAVPAGSAAGGRYEDAQLAALDSERPAER
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=286, Percent_Identity=28.3216783216783, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI4504825, Length=283, Percent_Identity=28.2685512367491, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI27436964, Length=291, Percent_Identity=27.1477663230241, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI27436962, Length=291, Percent_Identity=26.8041237113402, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI27436966, Length=309, Percent_Identity=26.2135922330097, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI27436971, Length=330, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI1788070, Length=314, Percent_Identity=30.2547770700637, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI87081735, Length=321, Percent_Identity=31.4641744548287, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI1789375, Length=331, Percent_Identity=28.3987915407855, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1787674, Length=313, Percent_Identity=28.1150159744409, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788081, Length=277, Percent_Identity=27.4368231046931, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789199, Length=343, Percent_Identity=27.1137026239067, Blast_Score=78, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6325169, Length=331, Percent_Identity=26.8882175226586, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6325384, Length=303, Percent_Identity=28.0528052805281, Blast_Score=93, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6323998, Length=302, Percent_Identity=24.5033112582781, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6319958, Length=297, Percent_Identity=24.5791245791246, Blast_Score=83, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6322615, Length=208, Percent_Identity=26.9230769230769, Blast_Score=70, Evalue=5e-13, Organism=Drosophila melanogaster, GI24646159, Length=311, Percent_Identity=24.7588424437299, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24646155, Length=308, Percent_Identity=25.6493506493506, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37154; Mature: 37154
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGPCRGVARRSRLAVMTQTTMTTRRLGATGPEVGALGLGCMGMSGMYGPADDDESVATI CCCCCHHHHHHHHEEEEEHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHH LAAVDAGMTLLDTGDFYGMGHNELLVGRALRQLDRDAVTVSVKFGALRDAVGGWGGLDAR HHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCCCCCC PAALRNFLAYSLVRLGTDHVDVYRPARLDPAVPIEETIGAIAEQVKAGLVRHIGLSEVGP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCH ETIRRAAAVHPICDLQIEYSVLSRGIEDEILATCRELGIAITAYGVLSRGLIAGTGPSGH HHHHHHHHCCCHHCCEEEHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCEEECCCCCCC SNDFRAHSPRFQGANLDHNLGLVERLRPVAERHGISVAQLAIAWVAAAGPDVIPLVGMRR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHCCCHH RSRIDDALAAAAVTLSEQDLADVDRAVPAGSAAGGRYEDAQLAALDSERPAER HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure MNGPCRGVARRSRLAVMTQTTMTTRRLGATGPEVGALGLGCMGMSGMYGPADDDESVATI CCCCCHHHHHHHHEEEEEHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHH LAAVDAGMTLLDTGDFYGMGHNELLVGRALRQLDRDAVTVSVKFGALRDAVGGWGGLDAR HHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCCCCCC PAALRNFLAYSLVRLGTDHVDVYRPARLDPAVPIEETIGAIAEQVKAGLVRHIGLSEVGP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCH ETIRRAAAVHPICDLQIEYSVLSRGIEDEILATCRELGIAITAYGVLSRGLIAGTGPSGH HHHHHHHHCCCHHCCEEEHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCEEECCCCCCC SNDFRAHSPRFQGANLDHNLGLVERLRPVAERHGISVAQLAIAWVAAAGPDVIPLVGMRR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHCCCHH RSRIDDALAAAAVTLSEQDLADVDRAVPAGSAAGGRYEDAQLAALDSERPAER HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 9298659 [H]