Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158315555

Identifier: 158315555

GI number: 158315555

Start: 4456981

End: 4457841

Strand: Reverse

Name: 158315555

Synonym: Franean1_3762

Alternate gene names: NA

Gene position: 4457841-4456981 (Counterclockwise)

Preceding gene: 158315558

Following gene: 158315554

Centisome position: 49.63

GC content: 64.23

Gene sequence:

>861_bases
GTGAGCAGGGACGATCGGAGAGGCTCATGGGCCCGGTTCCAGGACGCCGTCGTCTTCCTTTTCACGGTCGGGACGGGCGC
GAGTGCGCTGGGCGGCTGGACCGCAGGCACGGCGCAGGTCGTTCTTCGGGTTGTGGCCGGCATCGCCGCCATCTACATGA
TCCACCTGCTCGGTACCTACTACCGGCTCTCACGCGAGAACGACCTCGTCTCGGCGGAGCAGCTCATCCGGGATGTCGAG
GACGTGGTCACCCGACAGTCGGCACCCAACGAGGAGTCCGTCCAGGTCAAGATCATAATTGGCTGCTCGGATGAGGCTGA
CCGCGTCCAGGAGGAGGTGCGGGTCAGACCGAACCCACAGGTCGTGAACCGGATCATCAGACCGATCATGCCCTACCACT
GGCGGCGGCCCGGCCACCTCCGCGACATCGAGTTCACCTGCACCGTGGACGAGAGCGACGACGGCCCGGTGCTTGTCCGA
CCTCGACCGATGCGGAACCGGGAGTACCTGCAGATATGGTTGATCTTCACTCCGACGTTGACTAAGCCCACCGTATGGCG
GTTCCAGTACCGTCCACGCGGCCTGTGGCGGGAGCTTCGCGAGACTGGCCACGACCGTCTCGTCTGGCACGACACGATGC
CGTCCGACGGCAGATCCCCCATGGTCGACTTCCGGATCACTTTCGTGTTCGTGGATTCCACGTTCAAACCTCGGGTGAGC
GAGCGGAACGGGTACGGAACGACTTCCGGTCCAACGCGTTCAAGCACCGGCGAGTGGGTGGTGGACTGGCACGACCCCAG
TCCACAGGGAAGGCGCTACGAGTGGGTTATCGCCCGGACTCCGGCAATCGGGGCAAACTAG

Upstream 100 bases:

>100_bases
GGACGGCGATCCGGATGTACCTGTTGCTGGGCATGAGCACATCGACCGCGTCTCGTCGTGTTGATGAAGTCACCTTGTTT
GAGCAAGAGGTGTATGACAA

Downstream 100 bases:

>100_bases
GACGGAGGAGATTCAATGTCCAAGGACGGTAGTGCGTGCCGGCTGCTTGGAGGCGAGGGCGGAACCTGATCCACCTGCCC
GGGGCCGCTGGTGGCGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSRDDRRGSWARFQDAVVFLFTVGTGASALGGWTAGTAQVVLRVVAGIAAIYMIHLLGTYYRLSRENDLVSAEQLIRDVE
DVVTRQSAPNEESVQVKIIIGCSDEADRVQEEVRVRPNPQVVNRIIRPIMPYHWRRPGHLRDIEFTCTVDESDDGPVLVR
PRPMRNREYLQIWLIFTPTLTKPTVWRFQYRPRGLWRELRETGHDRLVWHDTMPSDGRSPMVDFRITFVFVDSTFKPRVS
ERNGYGTTSGPTRSSTGEWVVDWHDPSPQGRRYEWVIARTPAIGAN

Sequences:

>Translated_286_residues
MSRDDRRGSWARFQDAVVFLFTVGTGASALGGWTAGTAQVVLRVVAGIAAIYMIHLLGTYYRLSRENDLVSAEQLIRDVE
DVVTRQSAPNEESVQVKIIIGCSDEADRVQEEVRVRPNPQVVNRIIRPIMPYHWRRPGHLRDIEFTCTVDESDDGPVLVR
PRPMRNREYLQIWLIFTPTLTKPTVWRFQYRPRGLWRELRETGHDRLVWHDTMPSDGRSPMVDFRITFVFVDSTFKPRVS
ERNGYGTTSGPTRSSTGEWVVDWHDPSPQGRRYEWVIARTPAIGAN
>Mature_285_residues
SRDDRRGSWARFQDAVVFLFTVGTGASALGGWTAGTAQVVLRVVAGIAAIYMIHLLGTYYRLSRENDLVSAEQLIRDVED
VVTRQSAPNEESVQVKIIIGCSDEADRVQEEVRVRPNPQVVNRIIRPIMPYHWRRPGHLRDIEFTCTVDESDDGPVLVRP
RPMRNREYLQIWLIFTPTLTKPTVWRFQYRPRGLWRELRETGHDRLVWHDTMPSDGRSPMVDFRITFVFVDSTFKPRVSE
RNGYGTTSGPTRSSTGEWVVDWHDPSPQGRRYEWVIARTPAIGAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32909; Mature: 32777

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDDRRGSWARFQDAVVFLFTVGTGASALGGWTAGTAQVVLRVVAGIAAIYMIHLLGTY
CCCCCCCCCHHHHHCEEEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YRLSRENDLVSAEQLIRDVEDVVTRQSAPNEESVQVKIIIGCSDEADRVQEEVRVRPNPQ
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCHH
VVNRIIRPIMPYHWRRPGHLRDIEFTCTVDESDDGPVLVRPRPMRNREYLQIWLIFTPTL
HHHHHHHHCCCHHCCCCCCCEEEEEEEEECCCCCCCEEECCCCCCCCCEEEEEEEEECCC
TKPTVWRFQYRPRGLWRELRETGHDRLVWHDTMPSDGRSPMVDFRITFVFVDSTFKPRVS
CCCEEEEEEECCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCC
ERNGYGTTSGPTRSSTGEWVVDWHDPSPQGRRYEWVIARTPAIGAN
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure 
SRDDRRGSWARFQDAVVFLFTVGTGASALGGWTAGTAQVVLRVVAGIAAIYMIHLLGTY
CCCCCCCCHHHHHCEEEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YRLSRENDLVSAEQLIRDVEDVVTRQSAPNEESVQVKIIIGCSDEADRVQEEVRVRPNPQ
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCHH
VVNRIIRPIMPYHWRRPGHLRDIEFTCTVDESDDGPVLVRPRPMRNREYLQIWLIFTPTL
HHHHHHHHCCCHHCCCCCCCEEEEEEEEECCCCCCCEEECCCCCCCCCEEEEEEEEECCC
TKPTVWRFQYRPRGLWRELRETGHDRLVWHDTMPSDGRSPMVDFRITFVFVDSTFKPRVS
CCCEEEEEEECCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCC
ERNGYGTTSGPTRSSTGEWVVDWHDPSPQGRRYEWVIARTPAIGAN
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA