| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158315544
Identifier: 158315544
GI number: 158315544
Start: 4442883
End: 4443482
Strand: Reverse
Name: 158315544
Synonym: Franean1_3751
Alternate gene names: NA
Gene position: 4443482-4442883 (Counterclockwise)
Preceding gene: 158315545
Following gene: 158315543
Centisome position: 49.47
GC content: 73.33
Gene sequence:
>600_bases ATGCGGATCGGAAAGCTGCGCCTGCGGAGCGCGATGGCCTGCGCCGGAGTGGGGCTGGCGCTGCTGCTCACCGCGTGCGG CGGGGGCGGCGCGGACGACGGCTCGGCCACGGCAGGCGCGTCCAGTGCCAGCGAGGTGCCGCACACCTGGGCGACCGACG TCCCGGACAACCTGACCGGGGGTTCGGCGACACCGGCCCCGGCGGTCACGGTCGCGGCCGCCGCGTCCACCGCGTCGGCC TCCGCCGATCCGCGTACCGGCATCATTCCCGCGGATTTCCCGTTCCCCCCGGGGGCGACGGTGACCGTGTCCGACAGCAA GCCGACCGACGCGACCCTTAACCTCGCCGGCGTCACCCCGGCCGCGACCCTCGCCTTTTACCGGCAGGCGCTGCCGGGCG CCGGTTACAAGTTCTTCCAGGAGGGCGGTTCCGACGGGAGGACGAAACTCACCTTCACCGGGCGGAGTCAGAGCGTGGAA ATCCTCGCGGGCGGCACCCGGACCCCCGAGCTGGTGCTGGTCATCTTCACCCAGTGCACCAGCGCGGTGGAGGGTAGCGG CGTCGACAGCCGCCGCAGCGACCGGGTGGCGTGCGCCTGA
Upstream 100 bases:
>100_bases CCACGAGCGGCGTCGGGGATGACGTCTCGGATGAATTGCGGGCCGGATGGCGAGCTGACAAGACCGTGTACTGATCATAC GGTCTTGAAACGGGGGATCA
Downstream 100 bases:
>100_bases CGCGGCCGTGACCGCGCCCGGCCGGGTCCACCCGGTGACCCGGGTACCGGCAGGGCCTCCCTGACCCGCGGCGCCCCGCC TACCGTGGGCGGGGTGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MRIGKLRLRSAMACAGVGLALLLTACGGGGADDGSATAGASSASEVPHTWATDVPDNLTGGSATPAPAVTVAAAASTASA SADPRTGIIPADFPFPPGATVTVSDSKPTDATLNLAGVTPAATLAFYRQALPGAGYKFFQEGGSDGRTKLTFTGRSQSVE ILAGGTRTPELVLVIFTQCTSAVEGSGVDSRRSDRVACA
Sequences:
>Translated_199_residues MRIGKLRLRSAMACAGVGLALLLTACGGGGADDGSATAGASSASEVPHTWATDVPDNLTGGSATPAPAVTVAAAASTASA SADPRTGIIPADFPFPPGATVTVSDSKPTDATLNLAGVTPAATLAFYRQALPGAGYKFFQEGGSDGRTKLTFTGRSQSVE ILAGGTRTPELVLVIFTQCTSAVEGSGVDSRRSDRVACA >Mature_199_residues MRIGKLRLRSAMACAGVGLALLLTACGGGGADDGSATAGASSASEVPHTWATDVPDNLTGGSATPAPAVTVAAAASTASA SADPRTGIIPADFPFPPGATVTVSDSKPTDATLNLAGVTPAATLAFYRQALPGAGYKFFQEGGSDGRTKLTFTGRSQSVE ILAGGTRTPELVLVIFTQCTSAVEGSGVDSRRSDRVACA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19747; Mature: 19747
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGKLRLRSAMACAGVGLALLLTACGGGGADDGSATAGASSASEVPHTWATDVPDNLTG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSATPAPAVTVAAAASTASASADPRTGIIPADFPFPPGATVTVSDSKPTDATLNLAGVTP CCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCEEEECCCCH AATLAFYRQALPGAGYKFFQEGGSDGRTKLTFTGRSQSVEILAGGTRTPELVLVIFTQCT HHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEHHHH SAVEGSGVDSRRSDRVACA HHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRIGKLRLRSAMACAGVGLALLLTACGGGGADDGSATAGASSASEVPHTWATDVPDNLTG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSATPAPAVTVAAAASTASASADPRTGIIPADFPFPPGATVTVSDSKPTDATLNLAGVTP CCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCEEEECCCCH AATLAFYRQALPGAGYKFFQEGGSDGRTKLTFTGRSQSVEILAGGTRTPELVLVIFTQCT HHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEHHHH SAVEGSGVDSRRSDRVACA HHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA