| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315527
Identifier: 158315527
GI number: 158315527
Start: 4421266
End: 4422771
Strand: Reverse
Name: 158315527
Synonym: Franean1_3734
Alternate gene names: NA
Gene position: 4422771-4421266 (Counterclockwise)
Preceding gene: 158315528
Following gene: 158315525
Centisome position: 49.24
GC content: 69.19
Gene sequence:
>1506_bases GTGGCCAGAAAGCGCAAGTTCTCAACGGATAGGCATGTCTCGGCGTTCGTCTGTTTCCTAGCCGTCGCCGTATTCGGGTC GGCATGTTCCGACGGGTCGGGGCCGACGTCGAACACGGCGACGGAGACGACTCCGACAGCACCGCCGCGACCCGCGGGAC CGGCTGCCGAATTACACGAGCTCAGCGGCGGCAATGGTGTTGGCCTGGGTTCCCCGACGAAGGTCGACCTGGCCGGCACC GGGTACGTCGAGACCGAGTACGCCGCGTCGGGGACGGCAACGTCGTACGACCCGCAGGGTGCGCTCGGTGCCGACGGGCG CTGGACATTCCAACCCGGCGCTACCGCCCCGTACACCACCCGGGTGCTCGTACGGCGACCAGCCGCGGACAAGTTCAGCG GCACTGTCGTCGTGGAGTGGCTCAACGTCAGTTCCGGGACCGACTCCGACGTCGTGTGGTCGAGCACGCACGAGGAGCTG ATGCGGCAGGGCGACGCGTGGGTCGGTGTCTCAGCGCAGCGCATCGGCGTCATGGGCGGCCCCGTGCTCACCCCGACCGG CGGCGGTAACGCCACCGCGGGCGGATTGGTCAATACCGACTCCGCACGTTACGGCTCGCTCAACCAACCCGGCGACGGGT ACTCCTTCGACATCTTCACCCAAGCCGCGCGCGGGGTACGTGCCGGCGGCGGGGCGCTGGGCGAGCTGAAGCCGCAGCAC GTGCTCGCAGCAGGACAGTCCCAGTCGGCGTACGCGCTCGTCACCTACATCAACGGAGTGCAACCCCTCACCCGCGAGTT CGACGGCTTCCTCGTCCACAGCCGGGGCATCGGCGGCCTTCAGCTCGCCGCGCCAGGCGAGCCCGCCAGCCTCGGCTCCG AAACGGCGACCTCACCTGTGATCATCCGGACCGATACCGGCGTACCGGTGCTCGACATCCAAGCCGAGGGCGACCTCAGA GCCCCGCTGAACTCCCTCGGTGCCCGCCAGCCCGACAGCGACCGGTTCCGTCTCTGGGAAATAGCCGGGACAGCGCACGC TGACGCGCACACCGTCGGGCCGTTCGCCGACGCACTCGGCTGCGGGGCGATCAACAACGGTCCCATGCACATCGTCGTCA AGGCGGCATTGCACGCCCTCGACGAATGGGTGGTCACCGGGACAGCACCCGCCGCCGCACCCCGGCTCGAACTCACCCAG GACGACCCGCCGCAGATCGCCCGCGACACCGACGACATCGCCCGCGGCGGTGTGCGGACCCCACCTGTAGACGTACCGGT CGACGTCCTGTCGGGCACCCCCGGCCCGAACCCCTCCGTGACCTGCAGCCTGTTCGGCTCCACGACACCCCTGCCGGCCG AGCGGCTCGCGGCGCTCTACCCGTCCAGTGACGCCTACCTGCAGAAATACACCACCGCCGCGGACAGCACGATCAAAGCA GGATTCGTCCTGCCGGCAGACCGCGACGCGCTCCTCGCCTACGCACAGCCGACCCGCATCCAATAG
Upstream 100 bases:
>100_bases CCGATCACCGATGTGATCAGCGGGCCGATCCGCGATTCAGCTCAGCTGGCTGATTGCGGGACTAGATGAAATTCGACGGA AACGGTTGGGGCTGGAGAAT
Downstream 100 bases:
>100_bases GTCCCTGACGACCGACGGGGCTGTTGCGTTCGGGGAAGGCGTGGCGTGCCAGGCCCCGGTCGGACCCGGTGATCAGACAG CGAGAGCGAGTCGGTGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MARKRKFSTDRHVSAFVCFLAVAVFGSACSDGSGPTSNTATETTPTAPPRPAGPAAELHELSGGNGVGLGSPTKVDLAGT GYVETEYAASGTATSYDPQGALGADGRWTFQPGATAPYTTRVLVRRPAADKFSGTVVVEWLNVSSGTDSDVVWSSTHEEL MRQGDAWVGVSAQRIGVMGGPVLTPTGGGNATAGGLVNTDSARYGSLNQPGDGYSFDIFTQAARGVRAGGGALGELKPQH VLAAGQSQSAYALVTYINGVQPLTREFDGFLVHSRGIGGLQLAAPGEPASLGSETATSPVIIRTDTGVPVLDIQAEGDLR APLNSLGARQPDSDRFRLWEIAGTAHADAHTVGPFADALGCGAINNGPMHIVVKAALHALDEWVVTGTAPAAAPRLELTQ DDPPQIARDTDDIARGGVRTPPVDVPVDVLSGTPGPNPSVTCSLFGSTTPLPAERLAALYPSSDAYLQKYTTAADSTIKA GFVLPADRDALLAYAQPTRIQ
Sequences:
>Translated_501_residues MARKRKFSTDRHVSAFVCFLAVAVFGSACSDGSGPTSNTATETTPTAPPRPAGPAAELHELSGGNGVGLGSPTKVDLAGT GYVETEYAASGTATSYDPQGALGADGRWTFQPGATAPYTTRVLVRRPAADKFSGTVVVEWLNVSSGTDSDVVWSSTHEEL MRQGDAWVGVSAQRIGVMGGPVLTPTGGGNATAGGLVNTDSARYGSLNQPGDGYSFDIFTQAARGVRAGGGALGELKPQH VLAAGQSQSAYALVTYINGVQPLTREFDGFLVHSRGIGGLQLAAPGEPASLGSETATSPVIIRTDTGVPVLDIQAEGDLR APLNSLGARQPDSDRFRLWEIAGTAHADAHTVGPFADALGCGAINNGPMHIVVKAALHALDEWVVTGTAPAAAPRLELTQ DDPPQIARDTDDIARGGVRTPPVDVPVDVLSGTPGPNPSVTCSLFGSTTPLPAERLAALYPSSDAYLQKYTTAADSTIKA GFVLPADRDALLAYAQPTRIQ >Mature_500_residues ARKRKFSTDRHVSAFVCFLAVAVFGSACSDGSGPTSNTATETTPTAPPRPAGPAAELHELSGGNGVGLGSPTKVDLAGTG YVETEYAASGTATSYDPQGALGADGRWTFQPGATAPYTTRVLVRRPAADKFSGTVVVEWLNVSSGTDSDVVWSSTHEELM RQGDAWVGVSAQRIGVMGGPVLTPTGGGNATAGGLVNTDSARYGSLNQPGDGYSFDIFTQAARGVRAGGGALGELKPQHV LAAGQSQSAYALVTYINGVQPLTREFDGFLVHSRGIGGLQLAAPGEPASLGSETATSPVIIRTDTGVPVLDIQAEGDLRA PLNSLGARQPDSDRFRLWEIAGTAHADAHTVGPFADALGCGAINNGPMHIVVKAALHALDEWVVTGTAPAAAPRLELTQD DPPQIARDTDDIARGGVRTPPVDVPVDVLSGTPGPNPSVTCSLFGSTTPLPAERLAALYPSSDAYLQKYTTAADSTIKAG FVLPADRDALLAYAQPTRIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51597; Mature: 51466
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKRKFSTDRHVSAFVCFLAVAVFGSACSDGSGPTSNTATETTPTAPPRPAGPAAELHE CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LSGGNGVGLGSPTKVDLAGTGYVETEYAASGTATSYDPQGALGADGRWTFQPGATAPYTT CCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEE RVLVRRPAADKFSGTVVVEWLNVSSGTDSDVVWSSTHEELMRQGDAWVGVSAQRIGVMGG EEEEECCCCCCCCCEEEEEEEECCCCCCCCEEECCHHHHHHHCCCCEEECCHHEEEECCC PVLTPTGGGNATAGGLVNTDSARYGSLNQPGDGYSFDIFTQAARGVRAGGGALGELKPQH CEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCC VLAAGQSQSAYALVTYINGVQPLTREFDGFLVHSRGIGGLQLAAPGEPASLGSETATSPV EEECCCCCCCEEEEEECCCCCHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCE IIRTDTGVPVLDIQAEGDLRAPLNSLGARQPDSDRFRLWEIAGTAHADAHTVGPFADALG EEEECCCCEEEEEECCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHC CGAINNGPMHIVVKAALHALDEWVVTGTAPAAAPRLELTQDDPPQIARDTDDIARGGVRT CCCCCCCCEEEEHHHHHHHHHHHEEECCCCCCCCCEECCCCCCCCHHCCCHHHHHCCCCC PPVDVPVDVLSGTPGPNPSVTCSLFGSTTPLPAERLAALYPSSDAYLQKYTTAADSTIKA CCCCCCHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEC GFVLPADRDALLAYAQPTRIQ CEEECCCCCEEEEECCCCCCC >Mature Secondary Structure ARKRKFSTDRHVSAFVCFLAVAVFGSACSDGSGPTSNTATETTPTAPPRPAGPAAELHE CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LSGGNGVGLGSPTKVDLAGTGYVETEYAASGTATSYDPQGALGADGRWTFQPGATAPYTT CCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEE RVLVRRPAADKFSGTVVVEWLNVSSGTDSDVVWSSTHEELMRQGDAWVGVSAQRIGVMGG EEEEECCCCCCCCCEEEEEEEECCCCCCCCEEECCHHHHHHHCCCCEEECCHHEEEECCC PVLTPTGGGNATAGGLVNTDSARYGSLNQPGDGYSFDIFTQAARGVRAGGGALGELKPQH CEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCC VLAAGQSQSAYALVTYINGVQPLTREFDGFLVHSRGIGGLQLAAPGEPASLGSETATSPV EEECCCCCCCEEEEEECCCCCHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCE IIRTDTGVPVLDIQAEGDLRAPLNSLGARQPDSDRFRLWEIAGTAHADAHTVGPFADALG EEEECCCCEEEEEECCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHC CGAINNGPMHIVVKAALHALDEWVVTGTAPAAAPRLELTQDDPPQIARDTDDIARGGVRT CCCCCCCCEEEEHHHHHHHHHHHEEECCCCCCCCCEECCCCCCCCHHCCCHHHHHCCCCC PPVDVPVDVLSGTPGPNPSVTCSLFGSTTPLPAERLAALYPSSDAYLQKYTTAADSTIKA CCCCCCHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEC GFVLPADRDALLAYAQPTRIQ CEEECCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA