| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315483
Identifier: 158315483
GI number: 158315483
Start: 4365126
End: 4366310
Strand: Reverse
Name: 158315483
Synonym: Franean1_3688
Alternate gene names: NA
Gene position: 4366310-4365126 (Counterclockwise)
Preceding gene: 158315484
Following gene: 158315482
Centisome position: 48.61
GC content: 68.52
Gene sequence:
>1185_bases ATGCCCACCCACGACATTCCGGTGTTCGACGCCGACAACCACCTGTACGAGACCCAGGACGCGCTCACCAAGTTCCTGCC GGCGCGCTACCGGGGCGCGATCGACTACGTCGACGTGCACGGCCGGACGAAGATCGTCGTGCGCGGGCAGATCAGCCAGT ACATCCCGAACCCGACCTTCGAGGTCGTCGCCCGCCCGGGGGCGCAGGAGGACTACTACCGGCACGGCAACCCCGAGGGG AAGACGTACCGGGAGATCTTCGGCAAGCCGGTGCGGTCCATCGACGCCTGGCGGGAGCCGGCCGCGCGCATCAAGGTCAT GGACGAGCAGGGGCTCGACCGCACCCTGATGTTCCCCACGCTCGCCAGCCTGATCGAGGAGCGGATGCGCGACGACGCGG ACCTCGTCCACGCCGTCATCCACTCGCTCAACGAGTGGCTGTACGAGACCTGGCAGTTCAACTACCAGGACCGGATCTTC ACCACGCCGGTGATCACCCTGCCGATCGTGGAGAGGGCCGTCGAGGAGCTGGAGTGGGTCCTCGAGCGGGGCGCCCGGGT CATCCTCGTCCGGCCGGCGCCCGTGCCGGGCCTGCGCGGGCCGCGCTCGTTCGGCCTGCCGGAGTTCGACCCGTTCTGGG CCCGCGTGCAGGAGGCCGACATCCTCGTCGCACTGCACTCGTCCGACAGCGGGTACGCCCGCTACAGCGGCGAGTGGATG GGCGCCAACCGCGAGATGCTGCCGTTCCAGCCGAACCCGTTCCAGATGCTGCAGGCATGGCGGCCGGTCGAGGACGCGGT TTCGGCGCTCGTCTGCCACGGCGCGCTCTCCCGCTTCCCCCGGCTGAAGGTGGCCGTCGTCGAGAACGGGATGAGCTGGG TCGCCCCGCTGATGGACGCCATGAAGAACCTGTACAAGAAGATGCCGCACGACTTTCCCGAGAACCCGCTCGACGTGATC CGGCGCAACGTCTACGTCAGCCCGTTCTGGGAGGAGGACCTCGGCGCGCTGACCAAGGTCCTCGGTGAGGACCACGTGCT GTTCGGGTCCGACTATCCGCATCCGGAGGGGCTGGCGAACCCGGTCAGCTACATCGACGAGCTCGCCCACCTGCCGGAAC CGCTCGTGCGCAAGCTCATGGGCGGCAACCTCGCCCAGCTCATGAAGGTCCCGGCCGCGGTCTGA
Upstream 100 bases:
>100_bases GCGTGTCCTCGGCATGCCCCGCGAGCCCGCCCTCGACCGTGACCGTGCCTTCCGCGACGTGCCCCGCGGGGGATCCGGCC GCTCCTGACCAGGAGGTGTG
Downstream 100 bases:
>100_bases GCGGCAGCGCCTGATGAACCTCGCGGGGTAGGTCCCCCGCCCGTGGTCCGGCCGGCCACCACGGTGCCGTCGGGGCGGCC GGCCGGACCACAGCCATGAA
Product: amidohydrolase 2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MPTHDIPVFDADNHLYETQDALTKFLPARYRGAIDYVDVHGRTKIVVRGQISQYIPNPTFEVVARPGAQEDYYRHGNPEG KTYREIFGKPVRSIDAWREPAARIKVMDEQGLDRTLMFPTLASLIEERMRDDADLVHAVIHSLNEWLYETWQFNYQDRIF TTPVITLPIVERAVEELEWVLERGARVILVRPAPVPGLRGPRSFGLPEFDPFWARVQEADILVALHSSDSGYARYSGEWM GANREMLPFQPNPFQMLQAWRPVEDAVSALVCHGALSRFPRLKVAVVENGMSWVAPLMDAMKNLYKKMPHDFPENPLDVI RRNVYVSPFWEEDLGALTKVLGEDHVLFGSDYPHPEGLANPVSYIDELAHLPEPLVRKLMGGNLAQLMKVPAAV
Sequences:
>Translated_394_residues MPTHDIPVFDADNHLYETQDALTKFLPARYRGAIDYVDVHGRTKIVVRGQISQYIPNPTFEVVARPGAQEDYYRHGNPEG KTYREIFGKPVRSIDAWREPAARIKVMDEQGLDRTLMFPTLASLIEERMRDDADLVHAVIHSLNEWLYETWQFNYQDRIF TTPVITLPIVERAVEELEWVLERGARVILVRPAPVPGLRGPRSFGLPEFDPFWARVQEADILVALHSSDSGYARYSGEWM GANREMLPFQPNPFQMLQAWRPVEDAVSALVCHGALSRFPRLKVAVVENGMSWVAPLMDAMKNLYKKMPHDFPENPLDVI RRNVYVSPFWEEDLGALTKVLGEDHVLFGSDYPHPEGLANPVSYIDELAHLPEPLVRKLMGGNLAQLMKVPAAV >Mature_393_residues PTHDIPVFDADNHLYETQDALTKFLPARYRGAIDYVDVHGRTKIVVRGQISQYIPNPTFEVVARPGAQEDYYRHGNPEGK TYREIFGKPVRSIDAWREPAARIKVMDEQGLDRTLMFPTLASLIEERMRDDADLVHAVIHSLNEWLYETWQFNYQDRIFT TPVITLPIVERAVEELEWVLERGARVILVRPAPVPGLRGPRSFGLPEFDPFWARVQEADILVALHSSDSGYARYSGEWMG ANREMLPFQPNPFQMLQAWRPVEDAVSALVCHGALSRFPRLKVAVVENGMSWVAPLMDAMKNLYKKMPHDFPENPLDVIR RNVYVSPFWEEDLGALTKVLGEDHVLFGSDYPHPEGLANPVSYIDELAHLPEPLVRKLMGGNLAQLMKVPAAV
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44921; Mature: 44790
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTHDIPVFDADNHLYETQDALTKFLPARYRGAIDYVDVHGRTKIVVRGQISQYIPNPTF CCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCHHHHCCCCCC EVVARPGAQEDYYRHGNPEGKTYREIFGKPVRSIDAWREPAARIKVMDEQGLDRTLMFPT EEEECCCCCCCHHHCCCCCCCHHHHHHCCHHHHHHHHHCCHHHEEEECCCCCCHHHHHHH LASLIEERMRDDADLVHAVIHSLNEWLYETWQFNYQDRIFTTPVITLPIVERAVEELEWV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHH LERGARVILVRPAPVPGLRGPRSFGLPEFDPFWARVQEADILVALHSSDSGYARYSGEWM HHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCEEECCCEE GANREMLPFQPNPFQMLQAWRPVEDAVSALVCHGALSRFPRLKVAVVENGMSWVAPLMDA CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH MKNLYKKMPHDFPENPLDVIRRNVYVSPFWEEDLGALTKVLGEDHVLFGSDYPHPEGLAN HHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCC PVSYIDELAHLPEPLVRKLMGGNLAQLMKVPAAV HHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCC >Mature Secondary Structure PTHDIPVFDADNHLYETQDALTKFLPARYRGAIDYVDVHGRTKIVVRGQISQYIPNPTF CCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCHHHHCCCCCC EVVARPGAQEDYYRHGNPEGKTYREIFGKPVRSIDAWREPAARIKVMDEQGLDRTLMFPT EEEECCCCCCCHHHCCCCCCCHHHHHHCCHHHHHHHHHCCHHHEEEECCCCCCHHHHHHH LASLIEERMRDDADLVHAVIHSLNEWLYETWQFNYQDRIFTTPVITLPIVERAVEELEWV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHH LERGARVILVRPAPVPGLRGPRSFGLPEFDPFWARVQEADILVALHSSDSGYARYSGEWM HHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCEEECCCEE GANREMLPFQPNPFQMLQAWRPVEDAVSALVCHGALSRFPRLKVAVVENGMSWVAPLMDA CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH MKNLYKKMPHDFPENPLDVIRRNVYVSPFWEEDLGALTKVLGEDHVLFGSDYPHPEGLAN HHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCC PVSYIDELAHLPEPLVRKLMGGNLAQLMKVPAAV HHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA